| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is cps3A
Identifier: 28377988
GI number: 28377988
Start: 1106172
End: 1107083
Strand: Direct
Name: cps3A
Synonym: lp_1215
Alternate gene names: NA
Gene position: 1106172-1107083 (Clockwise)
Preceding gene: 28377984
Following gene: 28377989
Centisome position: 33.44
GC content: 39.69
Gene sequence:
>912_bases ATGACAAAAATTGCATGTGTGATTGTCACTTACAATCGGAAGCAATTGTTAGAAGAAGCATTGAATAGCGTGTTGATACA AACAGAATCACCGGAGTATGTTTTTGTTATTGATAATGCATCAACCGATGGGACTGAGAAATATATTAATGATAAATTCA ATTTTGACAATCGACAATGGCACTATGTGCGGTGCTCTCAAAATTTGGGTGGATCGGCTGGGTTTGCTCAAGGTATGCGG CTCGCCCTGCAGACAGATTGTAGTTGGATTTCAATCTCTGATGATGATGCAATTTTTGAGCCAGGATACTTTGCTGCATT ACGAAAAGGAATTAAGCAGTATCCTGAACAAAGCGTTTTTTCAGGTTCCGTGTTATTGCCTGATGGGAAACATGACATGA TGCATCGGGAAGTCATTACAAATTCGGCAACACTAACTGTGAGGTGTGTTACCGATGAAACTTATAAGCATGATTTTAGC TATGATATTTTCTCTTTTGTGGGGATTTTACTGAGTCGACAGGTCATCGAAGCGATTGGTTTGCCAGAGCAAGACTATTT TATCCGATTTGATGATTTTGAATATGCGGTGCGCGCATTAAAATTTGGTCGTTTCATGAATTTAAGTGCAGCTAAAGTTT TGCACAAAACGACTTATACTCGATCTGCTATTGCACCTTGGAAAGAGTATTATGTTATGCGTAATCGGATTGCGCTATTA ATAAAACATCGTGGCAACAATCACACTGTTCGCTGGTATTGTCGTCGCTTTTTATTGCGTAAATTGCTTGCAATTTTGCT ATTCAGCAATCGACGTAGACAAGCTCGTTCGTTAGTTAATGCTTATGTCAAAGGTTATCAGGATGGATGGCATGCACGCT TAGGTCGTCAATTGGCATTTTTGCCCTCCTGA
Upstream 100 bases:
>100_bases GCAGTGCGACTTATATGCTGTGAGTTGGGTGGCTAACGTTAAACTAATGTTTTTATTTTAGTTTGATAATAGCAATTTTG ATATCACTTGGGGGAAGCTA
Downstream 100 bases:
>100_bases GTTCTGTTAATATTTAAATAAAAATGATACAAGTTTTATCAATTTTTTACCTCAGTATCATAATATTTGGGAGTGGACAA ACATGCAATATGGGGCGATT
Product: glycosyltransferase
Products: NA
Alternate protein names: Glycosyl Transferase Family Protein; Glycosyl Transferase; Glycosyl Transferase Family 2 Protein; Rhamnosyl Transferase; Glycosyl Transferase Group 2 Family Domain Protein; Family 2 Glycosyl Transferase; Group 2 Family Glycosyl Transferase; EpsIIG Glycosyltransferase; Glycoside Transferase Family 2 Protein; Glycosyltransferase Group 2 Family Protein; Glycosyl Transferase Group 2 Family; DTDP-Rhamnosyl Transferase RfbF; Glycosyltransferase Family 2-Like B-Glycosyltransferase; Glycosyl Transferase Gt2D
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MTKIACVIVTYNRKQLLEEALNSVLIQTESPEYVFVIDNASTDGTEKYINDKFNFDNRQWHYVRCSQNLGGSAGFAQGMR LALQTDCSWISISDDDAIFEPGYFAALRKGIKQYPEQSVFSGSVLLPDGKHDMMHREVITNSATLTVRCVTDETYKHDFS YDIFSFVGILLSRQVIEAIGLPEQDYFIRFDDFEYAVRALKFGRFMNLSAAKVLHKTTYTRSAIAPWKEYYVMRNRIALL IKHRGNNHTVRWYCRRFLLRKLLAILLFSNRRRQARSLVNAYVKGYQDGWHARLGRQLAFLPS
Sequences:
>Translated_303_residues MTKIACVIVTYNRKQLLEEALNSVLIQTESPEYVFVIDNASTDGTEKYINDKFNFDNRQWHYVRCSQNLGGSAGFAQGMR LALQTDCSWISISDDDAIFEPGYFAALRKGIKQYPEQSVFSGSVLLPDGKHDMMHREVITNSATLTVRCVTDETYKHDFS YDIFSFVGILLSRQVIEAIGLPEQDYFIRFDDFEYAVRALKFGRFMNLSAAKVLHKTTYTRSAIAPWKEYYVMRNRIALL IKHRGNNHTVRWYCRRFLLRKLLAILLFSNRRRQARSLVNAYVKGYQDGWHARLGRQLAFLPS >Mature_302_residues TKIACVIVTYNRKQLLEEALNSVLIQTESPEYVFVIDNASTDGTEKYINDKFNFDNRQWHYVRCSQNLGGSAGFAQGMRL ALQTDCSWISISDDDAIFEPGYFAALRKGIKQYPEQSVFSGSVLLPDGKHDMMHREVITNSATLTVRCVTDETYKHDFSY DIFSFVGILLSRQVIEAIGLPEQDYFIRFDDFEYAVRALKFGRFMNLSAAKVLHKTTYTRSAIAPWKEYYVMRNRIALLI KHRGNNHTVRWYCRRFLLRKLLAILLFSNRRRQARSLVNAYVKGYQDGWHARLGRQLAFLPS
Specific function: Unknown
COG id: COG1216
COG function: function code R; Predicted glycosyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35136; Mature: 35004
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKIACVIVTYNRKQLLEEALNSVLIQTESPEYVFVIDNASTDGTEKYINDKFNFDNRQW CCEEEEEEEECCHHHHHHHHHHHEEEEECCCCEEEEEECCCCCCHHHHHCCCCCCCCCEE HYVRCSQNLGGSAGFAQGMRLALQTDCSWISISDDDAIFEPGYFAALRKGIKQYPEQSVF EEEEECCCCCCCCCHHHHHEEEEECCCCEEEECCCCCEECCHHHHHHHHHHHHCCCCHHC SGSVLLPDGKHDMMHREVITNSATLTVRCVTDETYKHDFSYDIFSFVGILLSRQVIEAIG CCCEECCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHC LPEQDYFIRFDDFEYAVRALKFGRFMNLSAAKVLHKTTYTRSAIAPWKEYYVMRNRIALL CCCCCCEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCEEEE IKHRGNNHTVRWYCRRFLLRKLLAILLFSNRRRQARSLVNAYVKGYQDGWHARLGRQLAF EEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHCCCEEC LPS CCC >Mature Secondary Structure TKIACVIVTYNRKQLLEEALNSVLIQTESPEYVFVIDNASTDGTEKYINDKFNFDNRQW CEEEEEEEECCHHHHHHHHHHHEEEEECCCCEEEEEECCCCCCHHHHHCCCCCCCCCEE HYVRCSQNLGGSAGFAQGMRLALQTDCSWISISDDDAIFEPGYFAALRKGIKQYPEQSVF EEEEECCCCCCCCCHHHHHEEEEECCCCEEEECCCCCEECCHHHHHHHHHHHHCCCCHHC SGSVLLPDGKHDMMHREVITNSATLTVRCVTDETYKHDFSYDIFSFVGILLSRQVIEAIG CCCEECCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHC LPEQDYFIRFDDFEYAVRALKFGRFMNLSAAKVLHKTTYTRSAIAPWKEYYVMRNRIALL CCCCCCEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCEEEE IKHRGNNHTVRWYCRRFLLRKLLAILLFSNRRRQARSLVNAYVKGYQDGWHARLGRQLAF EEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHCCCEEC LPS CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA