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The map label for this gene is yfkH [H]

Identifier: 28377948

GI number: 28377948

Start: 1071192

End: 1072112

Strand: Direct

Name: yfkH [H]

Synonym: lp_1174

Alternate gene names: 28377948

Gene position: 1071192-1072112 (Clockwise)

Preceding gene: 28377947

Following gene: 28377949

Centisome position: 32.38

GC content: 44.08

Gene sequence:

>921_bases
ATGAATTTAAAAGCCCGTTACCCTAAAATTGCGAAAAGCCTGGAAATTATTATTCGGCGGTATGGACAAGCCAATGTCAG
CAATAATGCGATTGTGCTAGCCTACTACGCGTTAATGTCGATTGCCCCGATTATCTTGATTGCCGGAAACCTCATTGCCC
GGTTCGATTTGAAGTCTGGGCAGATTTTAGCGTACGCTCAGGAAGTCATTCCTAGTAACGTCTACCAGACGTTTAAGCCG
ATTTTAGTTTCATTCCTGTCTAGTGGCAGCAGTAGTAGTTTGTCAATTGGGATTTTGGTGACAGTATGGTCGGCGTCTAA
AATTATTGCTGCGATTCGCAGGAGTCTAAATGAGGCGTACGGGGTTACAGATGCCCAAAATGCCGTTTGGACGCGAATTA
TTGCCTTTTTCTTAACGTTGGGACTATTACTCCTAATCGTAGGGCTGGCGATTTTCTTCACGTTGAGTCAGTTGATTCTA
GATGTGATCTTGAATTTAACGAACCTCACGCGTGCAATCATTCCGAATTGGATTAATCAGTTGTTGGAAAACAAAAACTT
GATTACCTTTGTTGGGATGTTCGTCGTCGCCATGTTGTTGTATTACTTTGTACCGAACGCCAAGGTGAAATTGCGTTACA
TTTGGACGGGGGCGTTAGTCACGACGATTGGCTGGATCGTGATCTCGCAAGGGTTCCGGGTATACATCGAATTATTTGCT
AAACGGATTACGACTTACCAAACGATTGGGAGTTTAATTGTACTGATGTTCTGGTTGAATTTTTCCGGGATTCTCTTGAT
GTTTGGTGGCGTCGTCAATGCGTCGGTGCAGGAATGGTTTGAGCATACGATTGAGCCAAAGTCTCCACGGATGATTCGCC
GCATTCGGCGACAATTCTTCAAACGCAAAAAAAACGACTAA

Upstream 100 bases:

>100_bases
GTCTATTCGCTGAAAGCACTAATCCTAGTATAAAAGGTGTTTCCCGCGGCATTCCATTGTATAATTGTAAATACTATAAG
TGAGCGTTGAGGATAAATGA

Downstream 100 bases:

>100_bases
AAAAGAATAATCAGAACCTTTTAATTGAATCCGGACGTTTAATCCTGTAAAATCAAAACTTTTTGCGATTTACATATTAA
ACGATTCGGATTTTGTGTAT

Product: integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MNLKARYPKIAKSLEIIIRRYGQANVSNNAIVLAYYALMSIAPIILIAGNLIARFDLKSGQILAYAQEVIPSNVYQTFKP
ILVSFLSSGSSSSLSIGILVTVWSASKIIAAIRRSLNEAYGVTDAQNAVWTRIIAFFLTLGLLLLIVGLAIFFTLSQLIL
DVILNLTNLTRAIIPNWINQLLENKNLITFVGMFVVAMLLYYFVPNAKVKLRYIWTGALVTTIGWIVISQGFRVYIELFA
KRITTYQTIGSLIVLMFWLNFSGILLMFGGVVNASVQEWFEHTIEPKSPRMIRRIRRQFFKRKKND

Sequences:

>Translated_306_residues
MNLKARYPKIAKSLEIIIRRYGQANVSNNAIVLAYYALMSIAPIILIAGNLIARFDLKSGQILAYAQEVIPSNVYQTFKP
ILVSFLSSGSSSSLSIGILVTVWSASKIIAAIRRSLNEAYGVTDAQNAVWTRIIAFFLTLGLLLLIVGLAIFFTLSQLIL
DVILNLTNLTRAIIPNWINQLLENKNLITFVGMFVVAMLLYYFVPNAKVKLRYIWTGALVTTIGWIVISQGFRVYIELFA
KRITTYQTIGSLIVLMFWLNFSGILLMFGGVVNASVQEWFEHTIEPKSPRMIRRIRRQFFKRKKND
>Mature_306_residues
MNLKARYPKIAKSLEIIIRRYGQANVSNNAIVLAYYALMSIAPIILIAGNLIARFDLKSGQILAYAQEVIPSNVYQTFKP
ILVSFLSSGSSSSLSIGILVTVWSASKIIAAIRRSLNEAYGVTDAQNAVWTRIIAFFLTLGLLLLIVGLAIFFTLSQLIL
DVILNLTNLTRAIIPNWINQLLENKNLITFVGMFVVAMLLYYFVPNAKVKLRYIWTGALVTTIGWIVISQGFRVYIELFA
KRITTYQTIGSLIVLMFWLNFSGILLMFGGVVNASVQEWFEHTIEPKSPRMIRRIRRQFFKRKKND

Specific function: Unknown

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017039
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: NA

Molecular weight: Translated: 34611; Mature: 34611

Theoretical pI: Translated: 10.85; Mature: 10.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLKARYPKIAKSLEIIIRRYGQANVSNNAIVLAYYALMSIAPIILIAGNLIARFDLKSG
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHEEECCCC
QILAYAQEVIPSNVYQTFKPILVSFLSSGSSSSLSIGILVTVWSASKIIAAIRRSLNEAY
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHEEEHHHHHHHHHHHHHHHHHHC
GVTDAQNAVWTRIIAFFLTLGLLLLIVGLAIFFTLSQLILDVILNLTNLTRAIIPNWINQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLENKNLITFVGMFVVAMLLYYFVPNAKVKLRYIWTGALVTTIGWIVISQGFRVYIELFA
HHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHCCHHHHHHHHH
KRITTYQTIGSLIVLMFWLNFSGILLMFGGVVNASVQEWFEHTIEPKSPRMIRRIRRQFF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
KRKKND
HHCCCC
>Mature Secondary Structure
MNLKARYPKIAKSLEIIIRRYGQANVSNNAIVLAYYALMSIAPIILIAGNLIARFDLKSG
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHEEECCCC
QILAYAQEVIPSNVYQTFKPILVSFLSSGSSSSLSIGILVTVWSASKIIAAIRRSLNEAY
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHEEEHHHHHHHHHHHHHHHHHHC
GVTDAQNAVWTRIIAFFLTLGLLLLIVGLAIFFTLSQLILDVILNLTNLTRAIIPNWINQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLENKNLITFVGMFVVAMLLYYFVPNAKVKLRYIWTGALVTTIGWIVISQGFRVYIELFA
HHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHCCHHHHHHHHH
KRITTYQTIGSLIVLMFWLNFSGILLMFGGVVNASVQEWFEHTIEPKSPRMIRRIRRQFF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
KRKKND
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969503; 9384377 [H]