| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
Click here to switch to the map view.
The map label for this gene is aroA [H]
Identifier: 28377878
GI number: 28377878
Start: 987562
End: 988557
Strand: Direct
Name: aroA [H]
Synonym: lp_1085
Alternate gene names: 28377878
Gene position: 987562-988557 (Clockwise)
Preceding gene: 28377877
Following gene: 28377879
Centisome position: 29.85
GC content: 50.3
Gene sequence:
>996_bases ATGATTATTATATTAAAACCAGCAACCGCTACGGCTATGCAGGCAAAGTTAGTGAGTCAATTTGGTGCGGATCACGAGAT CTTCACGCACAATAATCGAATTGCAATTCAAGGATTGCGTCCAGAAGCACTTCCCGCGGATGTGCAAGCAGCCAGTGAAT CAATCTTGACGGCAGTTCCCGCAGCGGTCCAAAGCAGCCGTCTCTTTCACCCAGAAGATACGATTATTAAGACGCCACAC AGTGTGATTGGCGGTAATCAATTCGTCATGATGGCTGGCCCGTGTTCAGTCGAAAGCGCTGAACACGTGGACCAGATGGC CGCGGTTGCCAAGCAGGGTGGTGCGACGATTGTTCGTGGCGGAGCATTCAAGCCACGGACGTCACCTTACAGCTTCCAAG GCCTCGGGGAGACGGGACTCCAATACTTACGGACGGCGGCTGATAAACATGGCCTTGATATGATTACCGAAGTGATGGAT GATGAACACGTGGCGATGGTGGCGAAATACACGGATATTTTTCAAATTGGTGCACGCAATATGCAAAATTTCTCGTTGCT TAAAGCCGTTGGACAGACCCAAATTCCGGTTGCATTAAAGCGAGGAATGTCGGCAACAATCGACGATGTGCTCAATGCAG CTGAATACATTGCAGCTGGTGGTAATCATCAGATCATGCTTTTGGAGCGGGGAATTCGAACGTTTGATAATAAGTACACA CGCAACACGTTTGACTTAGGTGCAGTGCCAGTCTTGCAATCGTTGACACATTACCCAGTCATCGTTGATCCGAGTCACGC GGTCGGTACCTGGGAACTCGTGACCCCGATGGCGATGGCAGGTGTAGCAGCTGGCGCCAGTGGCATGATCGTTGAAATTC ATGACCAGCCAACGCAAGCTTTATCCGATGGGCCGCAAGCGTTAAAACCCGCGACGTACTTAAAAATGGCGCAACAGGCT TTCCAGTTACATGATCTGATGCAAACGTGGGCGTAG
Upstream 100 bases:
>100_bases GTCCGCCAAGATATGTTAGCCAGTATTCAAGCGACTCCGCCGATTACGGCGCAGGCTTAGGCCTTAACTTTTGAGAATTG ATTAGTAGGAGGAAATTATT
Downstream 100 bases:
>100_bases GATGTGCCTATGACAAACATTGAAGTCAAGACGCGAGTTAAACAGTATCAGATCAAGATCATGATTAACAGTTTACATCA CCTAGGAACATTGGTAACTA
Product: 3-deoxy-7-phosphoheptulonate synthase
Products: NA
Alternate protein names: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase [H]
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MIIILKPATATAMQAKLVSQFGADHEIFTHNNRIAIQGLRPEALPADVQAASESILTAVPAAVQSSRLFHPEDTIIKTPH SVIGGNQFVMMAGPCSVESAEHVDQMAAVAKQGGATIVRGGAFKPRTSPYSFQGLGETGLQYLRTAADKHGLDMITEVMD DEHVAMVAKYTDIFQIGARNMQNFSLLKAVGQTQIPVALKRGMSATIDDVLNAAEYIAAGGNHQIMLLERGIRTFDNKYT RNTFDLGAVPVLQSLTHYPVIVDPSHAVGTWELVTPMAMAGVAAGASGMIVEIHDQPTQALSDGPQALKPATYLKMAQQA FQLHDLMQTWA
Sequences:
>Translated_331_residues MIIILKPATATAMQAKLVSQFGADHEIFTHNNRIAIQGLRPEALPADVQAASESILTAVPAAVQSSRLFHPEDTIIKTPH SVIGGNQFVMMAGPCSVESAEHVDQMAAVAKQGGATIVRGGAFKPRTSPYSFQGLGETGLQYLRTAADKHGLDMITEVMD DEHVAMVAKYTDIFQIGARNMQNFSLLKAVGQTQIPVALKRGMSATIDDVLNAAEYIAAGGNHQIMLLERGIRTFDNKYT RNTFDLGAVPVLQSLTHYPVIVDPSHAVGTWELVTPMAMAGVAAGASGMIVEIHDQPTQALSDGPQALKPATYLKMAQQA FQLHDLMQTWA >Mature_331_residues MIIILKPATATAMQAKLVSQFGADHEIFTHNNRIAIQGLRPEALPADVQAASESILTAVPAAVQSSRLFHPEDTIIKTPH SVIGGNQFVMMAGPCSVESAEHVDQMAAVAKQGGATIVRGGAFKPRTSPYSFQGLGETGLQYLRTAADKHGLDMITEVMD DEHVAMVAKYTDIFQIGARNMQNFSLLKAVGQTQIPVALKRGMSATIDDVLNAAEYIAAGGNHQIMLLERGIRTFDNKYT RNTFDLGAVPVLQSLTHYPVIVDPSHAVGTWELVTPMAMAGVAAGASGMIVEIHDQPTQALSDGPQALKPATYLKMAQQA FQLHDLMQTWA
Specific function: Catalyzes the condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) [H]
COG id: COG2876
COG function: function code E; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I DAHP synthase family [H]
Homologues:
Organism=Escherichia coli, GI1787466, Length=262, Percent_Identity=24.8091603053435, Blast_Score=77, Evalue=2e-15,
Paralogues:
None
Copy number: 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006218 - InterPro: IPR006268 [H]
Pfam domain/function: PF00793 DAHP_synth_1 [H]
EC number: =2.5.1.54 [H]
Molecular weight: Translated: 35557; Mature: 35557
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIILKPATATAMQAKLVSQFGADHEIFTHNNRIAIQGLRPEALPADVQAASESILTAVP CEEEEECCCHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCCCCCHHHHHHHHHHHHHH AAVQSSRLFHPEDTIIKTPHSVIGGNQFVMMAGPCSVESAEHVDQMAAVAKQGGATIVRG HHHHHCCCCCCCCCEEECCHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEC GAFKPRTSPYSFQGLGETGLQYLRTAADKHGLDMITEVMDDEHVAMVAKYTDIFQIGARN CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCC MQNFSLLKAVGQTQIPVALKRGMSATIDDVLNAAEYIAAGGNHQIMLLERGIRTFDNKYT CHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCHHHHCCCCC RNTFDLGAVPVLQSLTHYPVIVDPSHAVGTWELVTPMAMAGVAAGASGMIVEIHDQPTQA CCCCCCCHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCHHH LSDGPQALKPATYLKMAQQAFQLHDLMQTWA HCCCCHHCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIIILKPATATAMQAKLVSQFGADHEIFTHNNRIAIQGLRPEALPADVQAASESILTAVP CEEEEECCCHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCCCCCHHHHHHHHHHHHHH AAVQSSRLFHPEDTIIKTPHSVIGGNQFVMMAGPCSVESAEHVDQMAAVAKQGGATIVRG HHHHHCCCCCCCCCEEECCHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEC GAFKPRTSPYSFQGLGETGLQYLRTAADKHGLDMITEVMDDEHVAMVAKYTDIFQIGARN CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCC MQNFSLLKAVGQTQIPVALKRGMSATIDDVLNAAEYIAAGGNHQIMLLERGIRTFDNKYT CHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCHHHHCCCCC RNTFDLGAVPVLQSLTHYPVIVDPSHAVGTWELVTPMAMAGVAAGASGMIVEIHDQPTQA CCCCCCCHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCHHH LSDGPQALKPATYLKMAQQAFQLHDLMQTWA HCCCCHHCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571; 12743122 [H]