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The map label for this gene is ctsR

Identifier: 28377822

GI number: 28377822

Start: 935944

End: 936411

Strand: Direct

Name: ctsR

Synonym: lp_1018

Alternate gene names: 28377822

Gene position: 935944-936411 (Clockwise)

Preceding gene: 28377821

Following gene: 28377823

Centisome position: 28.29

GC content: 43.16

Gene sequence:

>468_bases
ATGCAAAGTCAAAATATCTCGGATATTATTGAAAAGTATTTAAAAAGTATTTTGGCGGACTCGGAGCATGTTGAAATTCG
ACGGTCAGAAATTGCCGACCTTTTCAACGTGGTACCCTCACAGATTAATTATGTGATTAAGACCCGGTTTACGATCCAAA
ATGGTTACTTAGTTGAAAGTAAACGTGGCGGTGGTGGTTATATTCGCATTGAGAAGGTTAATTTGGTCGATGATGCTGAT
GTGTTGGACGCCCTCATACAGGTGATCGGCGATTCAATCACACAACGAGATGCTTATGCGGTCGTCCAAAGTTTATACGA
GGACGACGTCTTAAATCGTCGGGAAGCGCAATTGATTTTAGTGGCGATTGACCACGAGACGTTAGGATTAACGGACCGGG
ACTTAGAAAACAGTCTGCGGGCCCGGATAATTATCGGAATCTTGAACCACTTGCGTTACGAAAGCTAA

Upstream 100 bases:

>100_bases
CATGCTAGTCCGCGGTTTGGGTGAAATTCTTTGCTTTTTTCCATTATCCTCGTATAATAATAGTCAATATTAGTCAAAGA
TAATGAAAAGGGTGAAGCAC

Downstream 100 bases:

>100_bases
AGAAAGCGAGGAATCGCAATGGATAACTTATTTACACCTAGTGCCAAAAGTGTGCTGGTACTGGCACAGGAACAGGCCAA
ATATTTCAAGCATCAGGCAG

Product: transcription regulator

Products: NA

Alternate protein names: Class three stress gene repressor

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MQSQNISDIIEKYLKSILADSEHVEIRRSEIADLFNVVPSQINYVIKTRFTIQNGYLVESKRGGGGYIRIEKVNLVDDAD
VLDALIQVIGDSITQRDAYAVVQSLYEDDVLNRREAQLILVAIDHETLGLTDRDLENSLRARIIIGILNHLRYES

Sequences:

>Translated_155_residues
MQSQNISDIIEKYLKSILADSEHVEIRRSEIADLFNVVPSQINYVIKTRFTIQNGYLVESKRGGGGYIRIEKVNLVDDAD
VLDALIQVIGDSITQRDAYAVVQSLYEDDVLNRREAQLILVAIDHETLGLTDRDLENSLRARIIIGILNHLRYES
>Mature_155_residues
MQSQNISDIIEKYLKSILADSEHVEIRRSEIADLFNVVPSQINYVIKTRFTIQNGYLVESKRGGGGYIRIEKVNLVDDAD
VLDALIQVIGDSITQRDAYAVVQSLYEDDVLNRREAQLILVAIDHETLGLTDRDLENSLRARIIIGILNHLRYES

Specific function: Binds to the ftsH promoter region, leading to repression of its expression

COG id: COG4463

COG function: function code K; Transcriptional repressor of class III stress genes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CtsR family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CTSR_LACPL (Q88XZ6)

Other databases:

- EMBL:   AL935254
- RefSeq:   NP_784714.1
- GeneID:   1062856
- GenomeReviews:   AL935263_GR
- KEGG:   lpl:lp_1018
- NMPDR:   fig|220668.1.peg.848
- HOGENOM:   HBG312520
- OMA:   KFQCVPS
- ProtClustDB:   CLSK872618
- BioCyc:   LPLA220668:LP_1018-MONOMER
- GO:   GO:0006350
- InterPro:   IPR008463
- PIRSF:   PIRSF010607

Pfam domain/function: PF05848 CtsR

EC number: NA

Molecular weight: Translated: 17614; Mature: 17614

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSQNISDIIEKYLKSILADSEHVEIRRSEIADLFNVVPSQINYVIKTRFTIQNGYLVES
CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEEHEEEEEEECCEEEEE
KRGGGGYIRIEKVNLVDDADVLDALIQVIGDSITQRDAYAVVQSLYEDDVLNRREAQLIL
CCCCCCEEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
VAIDHETLGLTDRDLENSLRARIIIGILNHLRYES
EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQSQNISDIIEKYLKSILADSEHVEIRRSEIADLFNVVPSQINYVIKTRFTIQNGYLVES
CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEEHEEEEEEECCEEEEE
KRGGGGYIRIEKVNLVDDADVLDALIQVIGDSITQRDAYAVVQSLYEDDVLNRREAQLIL
CCCCCCEEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
VAIDHETLGLTDRDLENSLRARIIIGILNHLRYES
EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12566566