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The map label for this gene is uidR [C]

Identifier: 28377727

GI number: 28377727

Start: 824671

End: 825231

Strand: Direct

Name: uidR [C]

Synonym: lp_0895

Alternate gene names: 28377727

Gene position: 824671-825231 (Clockwise)

Preceding gene: 28377725

Following gene: 28377729

Centisome position: 24.93

GC content: 45.28

Gene sequence:

>561_bases
ATGCGAAAGGATGCACAAATTAACCAACAGAAAATTTTGACTGCTGCGCGACAACTCTTTGCCGCGCGTTCAATCGAAAC
CGTTAGTATGAAAGATATTGCGACGGCCGCTGGTATCGGTCCCGGAACGTTGTATCGTCACTATGCCCATAAAAGTACAC
TATGTTTGGCATTGGTAACGGACCGAGTCGCAACTTTTATTAAAACCAATCAAGTCTACTTGACCACGACCTCGGTAGGT
GCAGCAGCACGTTTTGATCATGTTATTGGGGAATATTTAGCGATTCGTGAGCACAACATGGCGTTATTAATGAATGTCGA
GGCCGGTGAACCTGGTCGCCGTCAATTTTATCAGAGCGAACTTTATCAACAATTATGTGACCTATTAACGCAACTGGTTC
GTGATTTAAAGCCAACGCTTTCGAAACCGGCATGTGAGTTTCAAGCTGATATGTTAATTGCCATGCTGAAGGGGACTAGT
TATGCTTTTCAACGTCAATGGCGAGGACGGTCGCAGTCCGAACTATTGGCGCAATTGCACGCGTTAATGGTGACTGAATG
A

Upstream 100 bases:

>100_bases
CCTTAAATTGTATAATTATACCTTAAACGGAGTACACTCCGTTTGTCAAGTGATGCGTAAAAGTGTATGGTGAACTTAAG
TAAATAGGAGGGTGTGTCGA

Downstream 100 bases:

>100_bases
TGTTCACTATTGGCACTAGTGGTTTGGCGATTAACAGAGTGGGTTGATTGTTAAATCAAAAAAGATGGTTCTAGGCGGTT
AATCCTAGAGCCATCTTTTT

Product: transcription regulator (putative)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MRKDAQINQQKILTAARQLFAARSIETVSMKDIATAAGIGPGTLYRHYAHKSTLCLALVTDRVATFIKTNQVYLTTTSVG
AAARFDHVIGEYLAIREHNMALLMNVEAGEPGRRQFYQSELYQQLCDLLTQLVRDLKPTLSKPACEFQADMLIAMLKGTS
YAFQRQWRGRSQSELLAQLHALMVTE

Sequences:

>Translated_186_residues
MRKDAQINQQKILTAARQLFAARSIETVSMKDIATAAGIGPGTLYRHYAHKSTLCLALVTDRVATFIKTNQVYLTTTSVG
AAARFDHVIGEYLAIREHNMALLMNVEAGEPGRRQFYQSELYQQLCDLLTQLVRDLKPTLSKPACEFQADMLIAMLKGTS
YAFQRQWRGRSQSELLAQLHALMVTE
>Mature_186_residues
MRKDAQINQQKILTAARQLFAARSIETVSMKDIATAAGIGPGTLYRHYAHKSTLCLALVTDRVATFIKTNQVYLTTTSVG
AAARFDHVIGEYLAIREHNMALLMNVEAGEPGRRQFYQSELYQQLCDLLTQLVRDLKPTLSKPACEFQADMLIAMLKGTS
YAFQRQWRGRSQSELLAQLHALMVTE

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 20895; Mature: 20895

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKDAQINQQKILTAARQLFAARSIETVSMKDIATAAGIGPGTLYRHYAHKSTLCLALVT
CCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
DRVATFIKTNQVYLTTTSVGAAARFDHVIGEYLAIREHNMALLMNVEAGEPGRRQFYQSE
HHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHH
LYQQLCDLLTQLVRDLKPTLSKPACEFQADMLIAMLKGTSYAFQRQWRGRSQSELLAQLH
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHH
ALMVTE
HHHCCC
>Mature Secondary Structure
MRKDAQINQQKILTAARQLFAARSIETVSMKDIATAAGIGPGTLYRHYAHKSTLCLALVT
CCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
DRVATFIKTNQVYLTTTSVGAAARFDHVIGEYLAIREHNMALLMNVEAGEPGRRQFYQSE
HHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHH
LYQQLCDLLTQLVRDLKPTLSKPACEFQADMLIAMLKGTSYAFQRQWRGRSQSELLAQLH
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHH
ALMVTE
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11418146 [H]