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The map label for this gene is 28377729

Identifier: 28377729

GI number: 28377729

Start: 826727

End: 827164

Strand: Direct

Name: 28377729

Synonym: lp_0897

Alternate gene names: NA

Gene position: 826727-827164 (Clockwise)

Preceding gene: 28377727

Following gene: 28377730

Centisome position: 24.99

GC content: 51.14

Gene sequence:

>438_bases
ATGGGTTACGTGCTTGATTTGCGGCGGCAAGTTGGTCACCAACCGCTAGTAGTGGCCGGTGCGGCTTTAATGGCCCAAAA
TTCGATTGGCAAAATTGTCTTGATTTATCGAACCGATAACCACTGTTGGGGCTTGCCAGCTGGATCGACTGAACCGGGAG
AGACGGTCCAGCAAACGGCGCGACGGGAATTGAAAGAAGAGACTGGGCTGACGGTGGGTGAGTTAACGCTGATCGATGTC
TATAGTGGGCCCAAGATGCACTATCAGTATCCTAACGGGGACATTATTGACAGTGTCACCACGTTATATCGCGCCAATAC
AACGGGTGGTGAATTGATTCAAGCCACCGATGAGACGAGTACTGCGGCTTTCTTTGCTTTAGATGCTTTGCCGACACCGT
TGACCCCACTGACAAAGTGGATGCTTTGCGGTGAGTAA

Upstream 100 bases:

>100_bases
GGTTTCAGACATACACTCACTCCTAACGTGTTATGATTGCATTAAGTATAACATGTCTAATCAAAATATTACGACTTCGG
GTATTAGGGAGGAATCAAAA

Downstream 100 bases:

>100_bases
GCTTGACCATGCAGATGAGGTTTGCTATAGTGGACTGAAATATTAAGATGAATTGTCACCGGACAACGTTAACCCAACTT
CCTTAGGTCATTGTGGAAGT

Product: NTP pyrophosphohydrolase (putative)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MGYVLDLRRQVGHQPLVVAGAALMAQNSIGKIVLIYRTDNHCWGLPAGSTEPGETVQQTARRELKEETGLTVGELTLIDV
YSGPKMHYQYPNGDIIDSVTTLYRANTTGGELIQATDETSTAAFFALDALPTPLTPLTKWMLCGE

Sequences:

>Translated_145_residues
MGYVLDLRRQVGHQPLVVAGAALMAQNSIGKIVLIYRTDNHCWGLPAGSTEPGETVQQTARRELKEETGLTVGELTLIDV
YSGPKMHYQYPNGDIIDSVTTLYRANTTGGELIQATDETSTAAFFALDALPTPLTPLTKWMLCGE
>Mature_144_residues
GYVLDLRRQVGHQPLVVAGAALMAQNSIGKIVLIYRTDNHCWGLPAGSTEPGETVQQTARRELKEETGLTVGELTLIDVY
SGPKMHYQYPNGDIIDSVTTLYRANTTGGELIQATDETSTAAFFALDALPTPLTPLTKWMLCGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006357
- InterPro:   IPR023215
- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00702 Hydrolase; PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 15768; Mature: 15637

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYVLDLRRQVGHQPLVVAGAALMAQNSIGKIVLIYRTDNHCWGLPAGSTEPGETVQQTA
CCCEEHHHHHCCCCCEEEHHHHHHHCCCCCCEEEEEEECCCEECCCCCCCCCCHHHHHHH
RRELKEETGLTVGELTLIDVYSGPKMHYQYPNGDIIDSVTTLYRANTTGGELIQATDETS
HHHHHHHHCCEECCEEEEEECCCCEEEEECCCCCHHHHHHHHHCCCCCCCCEEEECCCCC
TAAFFALDALPTPLTPLTKWMLCGE
CEEEEEECCCCCCCCHHHHHHCCCC
>Mature Secondary Structure 
GYVLDLRRQVGHQPLVVAGAALMAQNSIGKIVLIYRTDNHCWGLPAGSTEPGETVQQTA
CCEEHHHHHCCCCCEEEHHHHHHHCCCCCCEEEEEEECCCEECCCCCCCCCCHHHHHHH
RRELKEETGLTVGELTLIDVYSGPKMHYQYPNGDIIDSVTTLYRANTTGGELIQATDETS
HHHHHHHHCCEECCEEEEEECCCCEEEEECCCCCHHHHHHHHHCCCCCCCCEEEECCCCC
TAAFFALDALPTPLTPLTKWMLCGE
CEEEEEECCCCCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8631946 [H]