| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is pbuG [H]
Identifier: 28377691
GI number: 28377691
Start: 785694
End: 787001
Strand: Direct
Name: pbuG [H]
Synonym: lp_0848
Alternate gene names: 28377691
Gene position: 785694-787001 (Clockwise)
Preceding gene: 28377689
Following gene: 28377692
Centisome position: 23.75
GC content: 44.04
Gene sequence:
>1308_bases ATGAATAAAATTGCGGCATATTTTAATTTTTCAGAATTGAAAACGTCAATGCGAACCGAAGTGCTGGCTGGCTTGACCAC GTTTGTTTCGATGGCATACATCCTATTTGTTAATCCGAGCGTCCTCGGGGCTTCGGGGATGGATAAGGGCGCCGTCTTCA CCGCGACGGCCTTAGCGTCAGCGTTAGGCTGTTTATTGATGGGGTTAGTTGCTAAGTACCCGATAGCAATTGCACCAGGA TTAGGCGTTAACGCGTTCTTTACTTATTCCGTAGTTATCGGAATGGGCATTAAATGGCAAACTGCTCTGGCTGGGGTGTT CGTTGCAGCCGTGATTTTTATCTTGATTACGATTTTTAAGCTCCGGGAAATGATTATTGATGCGATTCCGCGGGATATGA AGTTAGCAATTTCGGCGGGGATCGGGTTCTTCATTGCTTTTATTGGTCTTCATGGTGGTGGCTTAATTGTTGCCAACAAA TCAACGGTTGTTGGTCTGGGATCATTGACAGTTGGAACGACCTGGTTAACTATTTTTGGATTGATCGTCACGTTGATTTT GATGAGTCGCAAAGTTCCCGGTGGGATTTTTATCGGGATGGTTTTAACCTCCATTTTAGGGCTAGCAACTGGCTTGATTA AGATGCCATCCACAATTGTTTCGGCAGCACCTTCGTTGAAACCAACGTTTGGTGTGGCGCTTGGTCATATTGGTGATATT AATTCGTTACAATTGATTATTGTTGTTTTGACGTTCTTATTAGTGACATTCTTCGATACGGCCGGAACGCTAGTTGGATT GGCAGAACAGGCTGGATTCATGAAAAATAATAAAATGCCGCGGGTTGGTAAAGCGTTGATGGCCGATTCAACTTCGATGT TAGTTGGGTCAGTGTTGGGAACCTCACCAACTTCAGCTTATGTTGAATCTTCGGCCGGAATTGCGGTCGGTGGTCGCTCT GGGATGAGTGCAGTTGTTACTGGTGCGCTATTCATTCTTGGATTATTTTTCTCACCGTTATTAAACGTCGTGACGGATCA AGTTACTGCACCTGCACTGATTATTGTGGGTGTGTTGAGGGCAGAATCTTTAAAAGAGATCAGTTGGGAACGGTTTGAAA TTGCCGTACCCGCATTTCTAACTGTTATCGGGATGCCGTTGACTTATAGTATTTCTGATGGGATTGCTTTAGGCTTCATT GCATACGTCATTACGATGGTCGCAACTAAGCATGCCAAGGAAGTTCATCCATTAATGTACGTGCTGTTCTTCATCTTCAT TATCTTCTTGTGGATATTAAATGTCTGA
Upstream 100 bases:
>100_bases AAATAAACAAAATGATACGATTAAATACGTTAAAAGAACACTAAAACACGAACGTTTACAATTGTGCAATTGTAATTTAG GCGAATATTTGGAGGGAATC
Downstream 100 bases:
>100_bases CAGTTAAAGATGGTCAGCTCGACGTTATTGGCTAGTTACAGATAATTTAAATGACTTAATTCTAAACGGACTACTGACGC ACATGACGTTGGTAGTCTTT
Product: transport protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 435; Mature: 435
Protein sequence:
>435_residues MNKIAAYFNFSELKTSMRTEVLAGLTTFVSMAYILFVNPSVLGASGMDKGAVFTATALASALGCLLMGLVAKYPIAIAPG LGVNAFFTYSVVIGMGIKWQTALAGVFVAAVIFILITIFKLREMIIDAIPRDMKLAISAGIGFFIAFIGLHGGGLIVANK STVVGLGSLTVGTTWLTIFGLIVTLILMSRKVPGGIFIGMVLTSILGLATGLIKMPSTIVSAAPSLKPTFGVALGHIGDI NSLQLIIVVLTFLLVTFFDTAGTLVGLAEQAGFMKNNKMPRVGKALMADSTSMLVGSVLGTSPTSAYVESSAGIAVGGRS GMSAVVTGALFILGLFFSPLLNVVTDQVTAPALIIVGVLRAESLKEISWERFEIAVPAFLTVIGMPLTYSISDGIALGFI AYVITMVATKHAKEVHPLMYVLFFIFIIFLWILNV
Sequences:
>Translated_435_residues MNKIAAYFNFSELKTSMRTEVLAGLTTFVSMAYILFVNPSVLGASGMDKGAVFTATALASALGCLLMGLVAKYPIAIAPG LGVNAFFTYSVVIGMGIKWQTALAGVFVAAVIFILITIFKLREMIIDAIPRDMKLAISAGIGFFIAFIGLHGGGLIVANK STVVGLGSLTVGTTWLTIFGLIVTLILMSRKVPGGIFIGMVLTSILGLATGLIKMPSTIVSAAPSLKPTFGVALGHIGDI NSLQLIIVVLTFLLVTFFDTAGTLVGLAEQAGFMKNNKMPRVGKALMADSTSMLVGSVLGTSPTSAYVESSAGIAVGGRS GMSAVVTGALFILGLFFSPLLNVVTDQVTAPALIIVGVLRAESLKEISWERFEIAVPAFLTVIGMPLTYSISDGIALGFI AYVITMVATKHAKEVHPLMYVLFFIFIIFLWILNV >Mature_435_residues MNKIAAYFNFSELKTSMRTEVLAGLTTFVSMAYILFVNPSVLGASGMDKGAVFTATALASALGCLLMGLVAKYPIAIAPG LGVNAFFTYSVVIGMGIKWQTALAGVFVAAVIFILITIFKLREMIIDAIPRDMKLAISAGIGFFIAFIGLHGGGLIVANK STVVGLGSLTVGTTWLTIFGLIVTLILMSRKVPGGIFIGMVLTSILGLATGLIKMPSTIVSAAPSLKPTFGVALGHIGDI NSLQLIIVVLTFLLVTFFDTAGTLVGLAEQAGFMKNNKMPRVGKALMADSTSMLVGSVLGTSPTSAYVESSAGIAVGGRS GMSAVVTGALFILGLFFSPLLNVVTDQVTAPALIIVGVLRAESLKEISWERFEIAVPAFLTVIGMPLTYSISDGIALGFI AYVITMVATKHAKEVHPLMYVLFFIFIIFLWILNV
Specific function: Involved in the uptake of the purine bases hypoxanthine and guanine [H]
COG id: COG2252
COG function: function code R; Permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the xanthine/uracil permease family. AzgA purine transporter (TC 2.A.1.40) subfamily [H]
Homologues:
Organism=Escherichia coli, GI87082309, Length=415, Percent_Identity=42.1686746987952, Blast_Score=330, Evalue=7e-92, Organism=Escherichia coli, GI1790150, Length=425, Percent_Identity=42.8235294117647, Blast_Score=325, Evalue=5e-90, Organism=Escherichia coli, GI1790499, Length=423, Percent_Identity=34.7517730496454, Blast_Score=208, Evalue=7e-55, Organism=Escherichia coli, GI48994909, Length=422, Percent_Identity=34.8341232227488, Blast_Score=206, Evalue=3e-54,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006043 [H]
Pfam domain/function: PF00860 Xan_ur_permease [H]
EC number: NA
Molecular weight: Translated: 45730; Mature: 45730
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKIAAYFNFSELKTSMRTEVLAGLTTFVSMAYILFVNPSVLGASGMDKGAVFTATALAS CCCEEHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH ALGCLLMGLVAKYPIAIAPGLGVNAFFTYSVVIGMGIKWQTALAGVFVAAVIFILITIFK HHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH LREMIIDAIPRDMKLAISAGIGFFIAFIGLHGGGLIVANKSTVVGLGSLTVGTTWLTIFG HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCHHHHHHHHHHHH LIVTLILMSRKVPGGIFIGMVLTSILGLATGLIKMPSTIVSAAPSLKPTFGVALGHIGDI HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHCCCCC NSLQLIIVVLTFLLVTFFDTAGTLVGLAEQAGFMKNNKMPRVGKALMADSTSMLVGSVLG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCCCCHHHHHHHHCCHHHHHHHHHC TSPTSAYVESSAGIAVGGRSGMSAVVTGALFILGLFFSPLLNVVTDQVTAPALIIVGVLR CCCCHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AESLKEISWERFEIAVPAFLTVIGMPLTYSISDGIALGFIAYVITMVATKHAKEVHPLMY HHHHHHCCHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VLFFIFIIFLWILNV HHHHHHHHHHHHHCC >Mature Secondary Structure MNKIAAYFNFSELKTSMRTEVLAGLTTFVSMAYILFVNPSVLGASGMDKGAVFTATALAS CCCEEHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH ALGCLLMGLVAKYPIAIAPGLGVNAFFTYSVVIGMGIKWQTALAGVFVAAVIFILITIFK HHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH LREMIIDAIPRDMKLAISAGIGFFIAFIGLHGGGLIVANKSTVVGLGSLTVGTTWLTIFG HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCHHHHHHHHHHHH LIVTLILMSRKVPGGIFIGMVLTSILGLATGLIKMPSTIVSAAPSLKPTFGVALGHIGDI HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHCCCCC NSLQLIIVVLTFLLVTFFDTAGTLVGLAEQAGFMKNNKMPRVGKALMADSTSMLVGSVLG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCCCCHHHHHHHHCCHHHHHHHHHC TSPTSAYVESSAGIAVGGRSGMSAVVTGALFILGLFFSPLLNVVTDQVTAPALIIVGVLR CCCCHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AESLKEISWERFEIAVPAFLTVIGMPLTYSISDGIALGFIAYVITMVATKHAKEVHPLMY HHHHHHCCHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VLFFIFIIFLWILNV HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969499; 9384377; 11591660 [H]