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The map label for this gene is 28377689

Identifier: 28377689

GI number: 28377689

Start: 784565

End: 785038

Strand: Direct

Name: 28377689

Synonym: lp_0845

Alternate gene names: NA

Gene position: 784565-785038 (Clockwise)

Preceding gene: 28377682

Following gene: 28377691

Centisome position: 23.72

GC content: 44.94

Gene sequence:

>474_bases
ATGAACAGTGACGAATTAAGCAAACTTCTCAATGATTATTTTGAAGCATATCAAAATACAACCAAAACTATGATGGACTT
AGTGGCTTGGCCTTTAAGTCAAAATAAACTGTCATTTGAACAATTTTTAATATTGCGGCGCATTGCCACGACTGATGAAG
TGACACTCAATGATATTGCAATTCAGCGACAAGTAACGCGAAGCGCGATTTCACGGCAAGTCAAATCATTGTTAATGCAA
CACTATGTTTTTCAGGTGCCAGATCCGCGTGATCGGCGGCGGCTCTACTTACATTTAACAGAACGGGGACAACAAGTCGA
ACGGATTGTCGACCAAGCCATTACCCAGCACTTTGATCACTGGGTCAACCAGTTGGGCGCACCACAGATTGATCAAGTGC
TCAAGATGATGGGGACCTTTAGCCAGCAGGTCACGGACCTCGGTGAGCCACAGTCACACCCCGTTCTACACTAG

Upstream 100 bases:

>100_bases
AGGGAGGATGCTTAACGTTGGAATTTACGGGTAATTTCATGCAAAACAGTTAAAGGCGTGTTATATTTGGTCAAAAGTTA
ATGAAGTGATGGTGATCGCG

Downstream 100 bases:

>100_bases
GATGTACATGGGACTAACCACTAAATTAGTATTGATGAGCAACTATTTTGGTCGCTAGTCAAAAACAGACTTCTTAGGAA
TTGTCACAATTCTTAAGAAG

Product: transcription regulator

Products: NA

Alternate protein names: Transcription Regulator; MarR Family Transcriptional Regulator

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MNSDELSKLLNDYFEAYQNTTKTMMDLVAWPLSQNKLSFEQFLILRRIATTDEVTLNDIAIQRQVTRSAISRQVKSLLMQ
HYVFQVPDPRDRRRLYLHLTERGQQVERIVDQAITQHFDHWVNQLGAPQIDQVLKMMGTFSQQVTDLGEPQSHPVLH

Sequences:

>Translated_157_residues
MNSDELSKLLNDYFEAYQNTTKTMMDLVAWPLSQNKLSFEQFLILRRIATTDEVTLNDIAIQRQVTRSAISRQVKSLLMQ
HYVFQVPDPRDRRRLYLHLTERGQQVERIVDQAITQHFDHWVNQLGAPQIDQVLKMMGTFSQQVTDLGEPQSHPVLH
>Mature_157_residues
MNSDELSKLLNDYFEAYQNTTKTMMDLVAWPLSQNKLSFEQFLILRRIATTDEVTLNDIAIQRQVTRSAISRQVKSLLMQ
HYVFQVPDPRDRRRLYLHLTERGQQVERIVDQAITQHFDHWVNQLGAPQIDQVLKMMGTFSQQVTDLGEPQSHPVLH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18392; Mature: 18392

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSDELSKLLNDYFEAYQNTTKTMMDLVAWPLSQNKLSFEQFLILRRIATTDEVTLNDIA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHH
IQRQVTRSAISRQVKSLLMQHYVFQVPDPRDRRRLYLHLTERGQQVERIVDQAITQHFDH
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WVNQLGAPQIDQVLKMMGTFSQQVTDLGEPQSHPVLH
HHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MNSDELSKLLNDYFEAYQNTTKTMMDLVAWPLSQNKLSFEQFLILRRIATTDEVTLNDIA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHH
IQRQVTRSAISRQVKSLLMQHYVFQVPDPRDRRRLYLHLTERGQQVERIVDQAITQHFDH
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WVNQLGAPQIDQVLKMMGTFSQQVTDLGEPQSHPVLH
HHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA