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The map label for this gene is yqkD [H]

Identifier: 28377361

GI number: 28377361

Start: 414158

End: 415102

Strand: Direct

Name: yqkD [H]

Synonym: lp_0461

Alternate gene names: 28377361

Gene position: 414158-415102 (Clockwise)

Preceding gene: 28377360

Following gene: 28377362

Centisome position: 12.52

GC content: 49.63

Gene sequence:

>945_bases
ATGAAGCAGTCGACAAAATTTGGATTGAAATTGGCGGGCGTCATTGGTGCTGCAACTTATGCGGGAACGTTACTTGGTGG
CTTAGCGGCGTATCAAGTCGCGATGCACGTGAGTGACGCACAGAAGCAGCAGGGCCGCGAACGTTCGCGGGCAGAAAACA
CTGAAATTGAGAATTTTTGGTATTTCAAGCAGCCTAAACAGCAGTGGATGATCCAGTCCTTTGATGGGCTGAACTTAGTG
GCAACATATATCCCTAATCCGAAAACAATTGGCCGCTTGGCGATTTTGGCGCATGGTCTAGGACATTCGCGCGAACAAAT
GATTCCGTATGCGCGCATCTTTATGAGCTTGGGGTATGACGTTTTAATGCCTGATGCCCGGTCATTTGGTGATAGTCAAG
GCCATACGATTGGTTATGGTTGGCTAGACCGACTAGATTATGAACGTTGGATTACGATGGCGCTTAGTCAATTAGGTCTG
GATATTGACATCGTATTGATGGGAATTTCGATGGGGGCCGCCACGGTCATGGCGACTAGTGGTGAGCCGTTACCGGAGAA
TGTTAAAGCTATTGTGGAGGATAGCGGTTATGCGGATCTTTATGATGAAGCGAAGTTCAGACTGACTCATAAGTTCCACT
TGCCAGCCTATCCGATTATGCCGGTGGCGAATCGCTTAGCACACGTTCGCGCGGGCTATGGGTTTAAGGATGGCCGGATT
CTGCAACGGGTGATTGATGGCGGGTTACCGATCTTGATGATTCATGGTTCCAAGGATCAGACGGTGCCTGTTCGCAATGC
ACATACCTTGTACGACCAGTTGCCACAACAAAAGGGCCTGTATATCGACCCCGATGCTGGTCACGTTGAAGCCATCCGAA
CGCACCCGGATCGCTATCAAGAAGTGTTGGATGAATTCTTACATGAGCAGGCGGGGTTGGCTTAA

Upstream 100 bases:

>100_bases
TTGCCTTCAACGCATCATCGGTTATTCGGACAACGCAATCTCTTTTTGTAAGCAATTTATGCGCGTTTATGATTAAATAA
GGAGTAACGGAGGTGTTCGG

Downstream 100 bases:

>100_bases
GCCCCCTTAAATTAAAGTAATGATAAACATGAATTGACCGTGTTTTACCGGCTTAACGGTAAAAACGGTCTTTTTTTTGC
AATCTCGTCTTAGTGACAAG

Product: cell surface hydrolase, membrane-bound (putative)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MKQSTKFGLKLAGVIGAATYAGTLLGGLAAYQVAMHVSDAQKQQGRERSRAENTEIENFWYFKQPKQQWMIQSFDGLNLV
ATYIPNPKTIGRLAILAHGLGHSREQMIPYARIFMSLGYDVLMPDARSFGDSQGHTIGYGWLDRLDYERWITMALSQLGL
DIDIVLMGISMGAATVMATSGEPLPENVKAIVEDSGYADLYDEAKFRLTHKFHLPAYPIMPVANRLAHVRAGYGFKDGRI
LQRVIDGGLPILMIHGSKDQTVPVRNAHTLYDQLPQQKGLYIDPDAGHVEAIRTHPDRYQEVLDEFLHEQAGLA

Sequences:

>Translated_314_residues
MKQSTKFGLKLAGVIGAATYAGTLLGGLAAYQVAMHVSDAQKQQGRERSRAENTEIENFWYFKQPKQQWMIQSFDGLNLV
ATYIPNPKTIGRLAILAHGLGHSREQMIPYARIFMSLGYDVLMPDARSFGDSQGHTIGYGWLDRLDYERWITMALSQLGL
DIDIVLMGISMGAATVMATSGEPLPENVKAIVEDSGYADLYDEAKFRLTHKFHLPAYPIMPVANRLAHVRAGYGFKDGRI
LQRVIDGGLPILMIHGSKDQTVPVRNAHTLYDQLPQQKGLYIDPDAGHVEAIRTHPDRYQEVLDEFLHEQAGLA
>Mature_314_residues
MKQSTKFGLKLAGVIGAATYAGTLLGGLAAYQVAMHVSDAQKQQGRERSRAENTEIENFWYFKQPKQQWMIQSFDGLNLV
ATYIPNPKTIGRLAILAHGLGHSREQMIPYARIFMSLGYDVLMPDARSFGDSQGHTIGYGWLDRLDYERWITMALSQLGL
DIDIVLMGISMGAATVMATSGEPLPENVKAIVEDSGYADLYDEAKFRLTHKFHLPAYPIMPVANRLAHVRAGYGFKDGRI
LQRVIDGGLPILMIHGSKDQTVPVRNAHTLYDQLPQQKGLYIDPDAGHVEAIRTHPDRYQEVLDEFLHEQAGLA

Specific function: Unknown

COG id: COG1073

COG function: function code R; Hydrolases of the alpha/beta superfamily

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI226510965, Length=267, Percent_Identity=25.0936329588015, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001375 [H]

Pfam domain/function: PF00326 Peptidase_S9 [H]

EC number: NA

Molecular weight: Translated: 34999; Mature: 34999

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQSTKFGLKLAGVIGAATYAGTLLGGLAAYQVAMHVSDAQKQQGRERSRAENTEIENFW
CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
YFKQPKQQWMIQSFDGLNLVATYIPNPKTIGRLAILAHGLGHSREQMIPYARIFMSLGYD
EECCCHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC
VLMPDARSFGDSQGHTIGYGWLDRLDYERWITMALSQLGLDIDIVLMGISMGAATVMATS
EECCCHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHCCCEEEEECC
GEPLPENVKAIVEDSGYADLYDEAKFRLTHKFHLPAYPIMPVANRLAHVRAGYGFKDGRI
CCCCHHHHHHHHCCCCCCCHHHCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHH
LQRVIDGGLPILMIHGSKDQTVPVRNAHTLYDQLPQQKGLYIDPDAGHVEAIRTHPDRYQ
HHHHHHCCCCEEEEECCCCCEECCCCHHHHHHHCHHHCCCEECCCCCCCHHHHCCCHHHH
EVLDEFLHEQAGLA
HHHHHHHHHHCCCC
>Mature Secondary Structure
MKQSTKFGLKLAGVIGAATYAGTLLGGLAAYQVAMHVSDAQKQQGRERSRAENTEIENFW
CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
YFKQPKQQWMIQSFDGLNLVATYIPNPKTIGRLAILAHGLGHSREQMIPYARIFMSLGYD
EECCCHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC
VLMPDARSFGDSQGHTIGYGWLDRLDYERWITMALSQLGLDIDIVLMGISMGAATVMATS
EECCCHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHCCCEEEEECC
GEPLPENVKAIVEDSGYADLYDEAKFRLTHKFHLPAYPIMPVANRLAHVRAGYGFKDGRI
CCCCHHHHHHHHCCCCCCCHHHCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHH
LQRVIDGGLPILMIHGSKDQTVPVRNAHTLYDQLPQQKGLYIDPDAGHVEAIRTHPDRYQ
HHHHHHCCCCEEEEECCCCCEECCCCHHHHHHHCHHHCCCEECCCCCCCHHHHCCCHHHH
EVLDEFLHEQAGLA
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]