| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is znuC [H]
Identifier: 28377362
GI number: 28377362
Start: 415370
End: 416068
Strand: Direct
Name: znuC [H]
Synonym: lp_0463
Alternate gene names: 28377362
Gene position: 415370-416068 (Clockwise)
Preceding gene: 28377361
Following gene: 28377363
Centisome position: 12.56
GC content: 45.35
Gene sequence:
>699_bases ATGACGGAACCGTTAATTGCCGTCCAACACCTTGGAATTGGCTTTCCAAACAACCAGGTGTTTAAAGATTTGAATTTTAA CATTGAACAAGGTGACTTTTTGACCGTGATTGGTGAGAATGGGGTGGGGAAAACCACTTTAATTCGCGCCTTGCTTGGCA TGCTGAAGCCAACAGCCGGTCAAATTAAGTATTATCCGAATAAAAAAGCCATTAAAATTGGCTACGTGCCCCAATTTCGC AACTTAGACCAGGAGTATCCGTTAACGATTGAGGACTTTGTCGGGCTGAACCTAAAAGGGTGGCAGCCGTGGCTGTCTCG AGCTGAACATCGTCAGGTAGCGACAGCATTAGCCGTGACCAATTTGAAGAAACTCCGTCAGCGACCGCTTGGGATGGCTT CTGGTGGTGAAAAGCAGCGGGCTTACTTAGCACAAGCAATTGTGCAACAACCGCAGCTATTAATTTTAGACGAATCGACG GCTAGTCTGGACAATGAAATGAAGTATGAATTGTTGGACCTCGTTCAGAACTTAAACCAAACTAGCAACATTACCGTCTT CTTTGTGACGCACGACTTGCCATTAGCGAAGCAATACGCCAAACATTATCTGGCCTTAAAGCCCGGCCACCAGCAATTTG GCAATATCGCTGATATGTCGATAGAGCAATTAAAGGAGGCCACTAATGTCAATGTTTAG
Upstream 100 bases:
>100_bases ACGGCATTTTGAACTCAGGTATTGACAAATCACTGCATTCAGGTAAACTAAAATAGTAATCATTACGATTTACTTTAATT TAGAAAGTTGGGGTAGTGTT
Downstream 100 bases:
>100_bases CTTAGTATTTATGCGAAATGCCTACTTAGCAGGAACCTTTATTGCAATTATTTGTGGGACGATTGGCGTTTTCGTGATTG CCCGGAACCTCTCATTTCTG
Product: zinc/iron ABC transporter, ATP-binding protein
Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MTEPLIAVQHLGIGFPNNQVFKDLNFNIEQGDFLTVIGENGVGKTTLIRALLGMLKPTAGQIKYYPNKKAIKIGYVPQFR NLDQEYPLTIEDFVGLNLKGWQPWLSRAEHRQVATALAVTNLKKLRQRPLGMASGGEKQRAYLAQAIVQQPQLLILDEST ASLDNEMKYELLDLVQNLNQTSNITVFFVTHDLPLAKQYAKHYLALKPGHQQFGNIADMSIEQLKEATNVNV
Sequences:
>Translated_232_residues MTEPLIAVQHLGIGFPNNQVFKDLNFNIEQGDFLTVIGENGVGKTTLIRALLGMLKPTAGQIKYYPNKKAIKIGYVPQFR NLDQEYPLTIEDFVGLNLKGWQPWLSRAEHRQVATALAVTNLKKLRQRPLGMASGGEKQRAYLAQAIVQQPQLLILDEST ASLDNEMKYELLDLVQNLNQTSNITVFFVTHDLPLAKQYAKHYLALKPGHQQFGNIADMSIEQLKEATNVNV >Mature_231_residues TEPLIAVQHLGIGFPNNQVFKDLNFNIEQGDFLTVIGENGVGKTTLIRALLGMLKPTAGQIKYYPNKKAIKIGYVPQFRN LDQEYPLTIEDFVGLNLKGWQPWLSRAEHRQVATALAVTNLKKLRQRPLGMASGGEKQRAYLAQAIVQQPQLLILDESTA SLDNEMKYELLDLVQNLNQTSNITVFFVTHDLPLAKQYAKHYLALKPGHQQFGNIADMSIEQLKEATNVNV
Specific function: Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system [H]
COG id: COG1121
COG function: function code P; ABC-type Mn/Zn transport systems, ATPase component
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI116734710, Length=197, Percent_Identity=27.4111675126904, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI153792144, Length=168, Percent_Identity=28.5714285714286, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI7262393, Length=244, Percent_Identity=27.4590163934426, Blast_Score=68, Evalue=6e-12, Organism=Homo sapiens, GI148612853, Length=177, Percent_Identity=29.9435028248588, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI171184400, Length=204, Percent_Identity=28.4313725490196, Blast_Score=65, Evalue=6e-11, Organism=Homo sapiens, GI27881501, Length=195, Percent_Identity=27.1794871794872, Blast_Score=65, Evalue=6e-11, Organism=Homo sapiens, GI255708477, Length=203, Percent_Identity=25.615763546798, Blast_Score=65, Evalue=6e-11, Organism=Homo sapiens, GI30795238, Length=195, Percent_Identity=27.1794871794872, Blast_Score=65, Evalue=7e-11, Organism=Escherichia coli, GI1788165, Length=202, Percent_Identity=35.1485148514851, Blast_Score=118, Evalue=3e-28, Organism=Escherichia coli, GI1786803, Length=222, Percent_Identity=31.5315315315315, Blast_Score=108, Evalue=3e-25, Organism=Escherichia coli, GI1786345, Length=214, Percent_Identity=30.3738317757009, Blast_Score=107, Evalue=5e-25, Organism=Escherichia coli, GI1787041, Length=209, Percent_Identity=32.5358851674641, Blast_Score=99, Evalue=2e-22, Organism=Escherichia coli, GI87081709, Length=214, Percent_Identity=31.7757009345794, Blast_Score=99, Evalue=2e-22, Organism=Escherichia coli, GI1788761, Length=226, Percent_Identity=28.7610619469027, Blast_Score=93, Evalue=1e-20, Organism=Escherichia coli, GI1787500, Length=200, Percent_Identity=29.5, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1787164, Length=196, Percent_Identity=34.1836734693878, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI1790544, Length=243, Percent_Identity=26.3374485596708, Blast_Score=91, Evalue=6e-20, Organism=Escherichia coli, GI1787370, Length=212, Percent_Identity=29.2452830188679, Blast_Score=91, Evalue=8e-20, Organism=Escherichia coli, GI87081791, Length=202, Percent_Identity=29.7029702970297, Blast_Score=91, Evalue=8e-20, Organism=Escherichia coli, GI48994997, Length=223, Percent_Identity=30.4932735426009, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI1788506, Length=228, Percent_Identity=28.9473684210526, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI1790739, Length=219, Percent_Identity=28.7671232876712, Blast_Score=88, Evalue=4e-19, Organism=Escherichia coli, GI1787089, Length=213, Percent_Identity=30.5164319248826, Blast_Score=84, Evalue=6e-18, Organism=Escherichia coli, GI87081834, Length=200, Percent_Identity=29, Blast_Score=84, Evalue=9e-18, Organism=Escherichia coli, GI1787758, Length=222, Percent_Identity=23.8738738738739, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1789873, Length=209, Percent_Identity=29.1866028708134, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI87082267, Length=199, Percent_Identity=27.1356783919598, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1787029, Length=223, Percent_Identity=26.457399103139, Blast_Score=81, Evalue=7e-17, Organism=Escherichia coli, GI1786698, Length=196, Percent_Identity=28.0612244897959, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1786319, Length=213, Percent_Identity=26.7605633802817, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI1789864, Length=219, Percent_Identity=27.8538812785388, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1789962, Length=198, Percent_Identity=29.7979797979798, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1790467, Length=199, Percent_Identity=27.6381909547739, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1787712, Length=175, Percent_Identity=30.2857142857143, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI48995001, Length=205, Percent_Identity=31.219512195122, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1788225, Length=233, Percent_Identity=26.6094420600858, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1789672, Length=221, Percent_Identity=27.1493212669683, Blast_Score=75, Evalue=3e-15, Organism=Escherichia coli, GI1786253, Length=199, Percent_Identity=26.6331658291457, Blast_Score=74, Evalue=6e-15, Organism=Escherichia coli, GI1786703, Length=219, Percent_Identity=29.2237442922374, Blast_Score=74, Evalue=7e-15, Organism=Escherichia coli, GI1786563, Length=211, Percent_Identity=27.9620853080569, Blast_Score=74, Evalue=9e-15, Organism=Escherichia coli, GI1788450, Length=215, Percent_Identity=25.5813953488372, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1786398, Length=202, Percent_Identity=25.7425742574257, Blast_Score=73, Evalue=1e-14, Organism=Escherichia coli, GI1790525, Length=239, Percent_Identity=24.6861924686192, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI87082268, Length=227, Percent_Identity=24.6696035242291, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1789991, Length=252, Percent_Identity=26.984126984127, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI87081782, Length=188, Percent_Identity=32.4468085106383, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1789032, Length=205, Percent_Identity=24.390243902439, Blast_Score=68, Evalue=4e-13, Organism=Escherichia coli, GI145693107, Length=229, Percent_Identity=25.764192139738, Blast_Score=68, Evalue=4e-13, Organism=Escherichia coli, GI1788053, Length=198, Percent_Identity=28.2828282828283, Blast_Score=67, Evalue=7e-13, Organism=Escherichia coli, GI1790162, Length=252, Percent_Identity=26.1904761904762, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI2367384, Length=208, Percent_Identity=27.8846153846154, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI48994943, Length=198, Percent_Identity=25.2525252525253, Blast_Score=62, Evalue=2e-11, Organism=Escherichia coli, GI1786981, Length=211, Percent_Identity=29.3838862559242, Blast_Score=62, Evalue=4e-11, Organism=Escherichia coli, GI1787182, Length=176, Percent_Identity=32.3863636363636, Blast_Score=61, Evalue=6e-11, Organism=Escherichia coli, GI1788897, Length=210, Percent_Identity=22.3809523809524, Blast_Score=60, Evalue=9e-11, Organism=Caenorhabditis elegans, GI17555318, Length=200, Percent_Identity=29, Blast_Score=78, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17559834, Length=190, Percent_Identity=27.3684210526316, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI71992285, Length=198, Percent_Identity=29.7979797979798, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17532409, Length=219, Percent_Identity=31.0502283105023, Blast_Score=71, Evalue=5e-13, Organism=Caenorhabditis elegans, GI212646699, Length=193, Percent_Identity=27.979274611399, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI115533592, Length=234, Percent_Identity=26.0683760683761, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17510237, Length=193, Percent_Identity=23.3160621761658, Blast_Score=67, Evalue=6e-12, Organism=Caenorhabditis elegans, GI71992290, Length=212, Percent_Identity=26.8867924528302, Blast_Score=67, Evalue=7e-12, Organism=Caenorhabditis elegans, GI17555800, Length=202, Percent_Identity=26.2376237623762, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI193202349, Length=165, Percent_Identity=26.6666666666667, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17558664, Length=164, Percent_Identity=28.0487804878049, Blast_Score=65, Evalue=4e-11, Organism=Caenorhabditis elegans, GI193209708, Length=196, Percent_Identity=27.0408163265306, Blast_Score=64, Evalue=8e-11, Organism=Saccharomyces cerevisiae, GI6321121, Length=202, Percent_Identity=25.7425742574257, Blast_Score=82, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6324985, Length=192, Percent_Identity=30.2083333333333, Blast_Score=74, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6320296, Length=190, Percent_Identity=27.3684210526316, Blast_Score=66, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6325030, Length=184, Percent_Identity=26.6304347826087, Blast_Score=66, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6321720, Length=203, Percent_Identity=22.1674876847291, Blast_Score=64, Evalue=2e-11, Organism=Drosophila melanogaster, GI24653245, Length=158, Percent_Identity=29.1139240506329, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI281363262, Length=237, Percent_Identity=27.0042194092827, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24582014, Length=192, Percent_Identity=27.0833333333333, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI24582012, Length=192, Percent_Identity=27.0833333333333, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI24650853, Length=207, Percent_Identity=27.0531400966184, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24650855, Length=207, Percent_Identity=27.0531400966184, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI221474134, Length=208, Percent_Identity=29.3269230769231, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI281362751, Length=207, Percent_Identity=27.0531400966184, Blast_Score=68, Evalue=6e-12, Organism=Drosophila melanogaster, GI24643674, Length=191, Percent_Identity=26.1780104712042, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24666092, Length=199, Percent_Identity=27.1356783919598, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI85725262, Length=224, Percent_Identity=25.8928571428571, Blast_Score=65, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017882 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 26057; Mature: 25926
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEPLIAVQHLGIGFPNNQVFKDLNFNIEQGDFLTVIGENGVGKTTLIRALLGMLKPTAG CCCCHHHHHHHCCCCCCCHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCC QIKYYPNKKAIKIGYVPQFRNLDQEYPLTIEDFVGLNLKGWQPWLSRAEHRQVATALAVT CEEECCCCCEEEEECCCHHHCCCCCCCEEHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH NLKKLRQRPLGMASGGEKQRAYLAQAIVQQPQLLILDESTASLDNEMKYELLDLVQNLNQ HHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCHHCCCHHHHHHHHHHHHHCCC TSNITVFFVTHDLPLAKQYAKHYLALKPGHQQFGNIADMSIEQLKEATNVNV CCCEEEEEEECCCCHHHHHHHHHEEECCCHHHHCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure TEPLIAVQHLGIGFPNNQVFKDLNFNIEQGDFLTVIGENGVGKTTLIRALLGMLKPTAG CCCHHHHHHHCCCCCCCHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCC QIKYYPNKKAIKIGYVPQFRNLDQEYPLTIEDFVGLNLKGWQPWLSRAEHRQVATALAVT CEEECCCCCEEEEECCCHHHCCCCCCCEEHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH NLKKLRQRPLGMASGGEKQRAYLAQAIVQQPQLLILDESTASLDNEMKYELLDLVQNLNQ HHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCHHCCCHHHHHHHHHHHHHCCC TSNITVFFVTHDLPLAKQYAKHYLALKPGHQQFGNIADMSIEQLKEATNVNV CCCEEEEEEECCCCHHHHHHHHHEEECCCHHHHCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Zn (II) [Periplasm]; H2O; ATP [C]
Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA