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The map label for this gene is ypaA [H]

Identifier: 28377272

GI number: 28377272

Start: 325267

End: 325635

Strand: Direct

Name: ypaA [H]

Synonym: lp_0357

Alternate gene names: 28377272

Gene position: 325267-325635 (Clockwise)

Preceding gene: 28377271

Following gene: 28377275

Centisome position: 9.83

GC content: 45.26

Gene sequence:

>369_bases
ATGCACGTTGCAGCAATGATTATGGCGATCTTGGTTGCCGTTGAACATTTATTTATTTTGTGGCTGGAAATGTTTAATGC
GGATAGTGAAATGGCCGCAAAAGCGTTTGGAATTCCACGGCAAACGCTACAGTCGCCGTCAGTGCAATTATTGTTTAAAA
ATCAAGGGTTATATAACGGTTTCTTGGCCGTCGGTATTTTATACAGCTTGTTTGTGATTCCGGCCGTCGCGAGCGCCGGT
GCAACCCTGTTTTTCTTAGCCTGTGTGATGGTTGCCGCGGTTTATGGTAGTATTACTGTCAGTCGCGCGATCGTCGTGAT
TCAGGGGCTACCGGCATTAATTGCGTTTATTCTGATGTATTTTGCTTAG

Upstream 100 bases:

>100_bases
CGAATTAGCTCGTATAAAGACAAGTAAGTCTGTATTTCTACAGTTTAGGCGCAGTAACTGGTACAATTCAAGTAAGGACC
GAAAAAAGGAGGGGATTAGG

Downstream 100 bases:

>100_bases
CCGGTTCTTTGAAGTAATGCCATTATATTAGTGTTAATAAAAAACGTTGCTACGTGATTCTGTAGCAACGTTTTTGGTTG
TCTAAGCTATCCATATTATA

Product: integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MHVAAMIMAILVAVEHLFILWLEMFNADSEMAAKAFGIPRQTLQSPSVQLLFKNQGLYNGFLAVGILYSLFVIPAVASAG
ATLFFLACVMVAAVYGSITVSRAIVVIQGLPALIAFILMYFA

Sequences:

>Translated_122_residues
MHVAAMIMAILVAVEHLFILWLEMFNADSEMAAKAFGIPRQTLQSPSVQLLFKNQGLYNGFLAVGILYSLFVIPAVASAG
ATLFFLACVMVAAVYGSITVSRAIVVIQGLPALIAFILMYFA
>Mature_122_residues
MHVAAMIMAILVAVEHLFILWLEMFNADSEMAAKAFGIPRQTLQSPSVQLLFKNQGLYNGFLAVGILYSLFVIPAVASAG
ATLFFLACVMVAAVYGSITVSRAIVVIQGLPALIAFILMYFA

Specific function: Unknown

COG id: COG3759

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009732 [H]

Pfam domain/function: PF06993 DUF1304 [H]

EC number: NA

Molecular weight: Translated: 13145; Mature: 13145

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHVAAMIMAILVAVEHLFILWLEMFNADSEMAAKAFGIPRQTLQSPSVQLLFKNQGLYNG
CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHCCCCCEEEECCCCCHHH
FLAVGILYSLFVIPAVASAGATLFFLACVMVAAVYGSITVSRAIVVIQGLPALIAFILMY
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
FA
HC
>Mature Secondary Structure
MHVAAMIMAILVAVEHLFILWLEMFNADSEMAAKAFGIPRQTLQSPSVQLLFKNQGLYNG
CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHCCCCCEEEECCCCCHHH
FLAVGILYSLFVIPAVASAGATLFFLACVMVAAVYGSITVSRAIVVIQGLPALIAFILMY
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
FA
HC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1400208; 11337471 [H]