| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is sufI [H]
Identifier: 28377271
GI number: 28377271
Start: 323497
End: 325002
Strand: Direct
Name: sufI [H]
Synonym: lp_0355
Alternate gene names: 28377271
Gene position: 323497-325002 (Clockwise)
Preceding gene: 28377270
Following gene: 28377272
Centisome position: 9.78
GC content: 47.68
Gene sequence:
>1506_bases ATGGCAAAAAAAGTCTATACTGATTATTTTTTTGATGAACCTGCTTACAACACACATGACGGTGGCTATATTCCACTAGT TACACCGAAAGTCGAGCCACAACCGTTAGCGATTCCGCCGTTATTGAAGCCGGACCGCCAGACGGATACGGATGATTACT ATACCGTCACGGCGCAAGAAAGCGAAACTCAGTTTTTACCTGGTAAGAAGACTAAAACGTGGGGCTATAATGCGGGCTTC CTAGGCCAAACTATCGTCTTTCGTAATGGTAAGCAGACCCATATTGACTTGGAAAATAAACTCCCAGAATTGACGACTTT CCATTGGCACGGCTTGAATGTCCCAGGGCCCATTACCGATGGTGGCTGCCACGCACCGGTCTATCCCGGTGAAACGAATC ACATTGACTTTAAAGTACATCAACCAGCTGCGACTACGTGGTTACATGCTCATCCGTGCCCATCGACTGCGACGCAGGTC TGGAAAGGCCTAGCAACGATGGTGATTATTAAGGATGACGTTGAAGATCAGTTACCGTTACCACGTAATTATGGTGTGGA TGATATTCCGTTGGTATTACAAGACCGTGAATTTCACGATGATAACCAATTTGATTACCGGGCGGACTACGATCCAGATG GTGTTCAAGGGCATACGGCGTTAGTTAACGGGACGGTCAACCCATATTTTGATGTGACGACGCAGCGGGTGCGGCTACGA ATCTTGGATGGGTCGAACCGGCGCGAATGGCGTCTGCACTTCAATGACGATTTGGAATTTGCACAGGTCGCTTCCGATGG TGGCATTTTGCCGGCACCGGTTTATATGACTAAAGTGATGATGACCTGTGCGGAACGGGACGAAATTGTCGTTGATTTCG GTCAGTATCAGCCGGGCGATGAAGTCACGCTGATGACGGATGATACGCCGCTATGTCGCTTCCGAATCAAGTCGTTCGTA CCGGATGACACCAAACTACCAGAACATTTAGTTGATATTCCTGATGAAACCCCAACACCTGACTTACCTGTTCGCACAAT CACGATGGATGGGATGGATGATGAAGTCGCGCTGGATGGTAAGAAATTCGATATGAGTCGCATCGACGCTCGGCAGAAAG TTGGGGATGTCGCCATTTGGGAAATCCGCAACACCAACAGTACTGAAAACGGCATGGTTCATCCATTCCACGTTCATGGG ACTCAGTTTAGAGTTTTGGCACGGAATGATGGTCCAGTTTATCCTAATGAACATGGGCTGAAGGATACGGTCGGTGTCAA CCCTGGTGAAACGGTGCGGATCAAGGTCAAATTTGAGCTGACAGGAGTTTACATGTATCACTGCCATATCATCGAACATG AAGATGGTGGTATGATGGCCCAAATTGAATCATATGATCCCCAACACCCACAAACTTATCATTTAATGGATATGGACACC TTACGGAATGCTTTTGCGAAGGAACAAGGCATCAAGCCCGAAGATGTTTGGATGCCCGGTATGTAA
Upstream 100 bases:
>100_bases TTTGACACTTTTTTAAAATAATTCTAAACTGAAGGTGACGTATAAAAGCGCCACCATTTTTTGAATCTAAGTTATTTTAA ATATCTAAGGGGATGTCAAC
Downstream 100 bases:
>100_bases GTGTAGATTAAGCTAATTTAGTGATGAGATGTGAATAAAGTCCGGTTGCAACCAGCAAGTTATCTGCTTGGTCGTAGCCG GGCTTTATCATTTAAAAGCA
Product: cell division protein SufI
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 501; Mature: 500
Protein sequence:
>501_residues MAKKVYTDYFFDEPAYNTHDGGYIPLVTPKVEPQPLAIPPLLKPDRQTDTDDYYTVTAQESETQFLPGKKTKTWGYNAGF LGQTIVFRNGKQTHIDLENKLPELTTFHWHGLNVPGPITDGGCHAPVYPGETNHIDFKVHQPAATTWLHAHPCPSTATQV WKGLATMVIIKDDVEDQLPLPRNYGVDDIPLVLQDREFHDDNQFDYRADYDPDGVQGHTALVNGTVNPYFDVTTQRVRLR ILDGSNRREWRLHFNDDLEFAQVASDGGILPAPVYMTKVMMTCAERDEIVVDFGQYQPGDEVTLMTDDTPLCRFRIKSFV PDDTKLPEHLVDIPDETPTPDLPVRTITMDGMDDEVALDGKKFDMSRIDARQKVGDVAIWEIRNTNSTENGMVHPFHVHG TQFRVLARNDGPVYPNEHGLKDTVGVNPGETVRIKVKFELTGVYMYHCHIIEHEDGGMMAQIESYDPQHPQTYHLMDMDT LRNAFAKEQGIKPEDVWMPGM
Sequences:
>Translated_501_residues MAKKVYTDYFFDEPAYNTHDGGYIPLVTPKVEPQPLAIPPLLKPDRQTDTDDYYTVTAQESETQFLPGKKTKTWGYNAGF LGQTIVFRNGKQTHIDLENKLPELTTFHWHGLNVPGPITDGGCHAPVYPGETNHIDFKVHQPAATTWLHAHPCPSTATQV WKGLATMVIIKDDVEDQLPLPRNYGVDDIPLVLQDREFHDDNQFDYRADYDPDGVQGHTALVNGTVNPYFDVTTQRVRLR ILDGSNRREWRLHFNDDLEFAQVASDGGILPAPVYMTKVMMTCAERDEIVVDFGQYQPGDEVTLMTDDTPLCRFRIKSFV PDDTKLPEHLVDIPDETPTPDLPVRTITMDGMDDEVALDGKKFDMSRIDARQKVGDVAIWEIRNTNSTENGMVHPFHVHG TQFRVLARNDGPVYPNEHGLKDTVGVNPGETVRIKVKFELTGVYMYHCHIIEHEDGGMMAQIESYDPQHPQTYHLMDMDT LRNAFAKEQGIKPEDVWMPGM >Mature_500_residues AKKVYTDYFFDEPAYNTHDGGYIPLVTPKVEPQPLAIPPLLKPDRQTDTDDYYTVTAQESETQFLPGKKTKTWGYNAGFL GQTIVFRNGKQTHIDLENKLPELTTFHWHGLNVPGPITDGGCHAPVYPGETNHIDFKVHQPAATTWLHAHPCPSTATQVW KGLATMVIIKDDVEDQLPLPRNYGVDDIPLVLQDREFHDDNQFDYRADYDPDGVQGHTALVNGTVNPYFDVTTQRVRLRI LDGSNRREWRLHFNDDLEFAQVASDGGILPAPVYMTKVMMTCAERDEIVVDFGQYQPGDEVTLMTDDTPLCRFRIKSFVP DDTKLPEHLVDIPDETPTPDLPVRTITMDGMDDEVALDGKKFDMSRIDARQKVGDVAIWEIRNTNSTENGMVHPFHVHGT QFRVLARNDGPVYPNEHGLKDTVGVNPGETVRIKVKFELTGVYMYHCHIIEHEDGGMMAQIESYDPQHPQTYHLMDMDTL RNAFAKEQGIKPEDVWMPGM
Specific function: May be involved in copper homeostasis and oxidative stress response [H]
COG id: COG2132
COG function: function code Q; Putative multicopper oxidases
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the multicopper oxidase family [H]
Homologues:
Organism=Escherichia coli, GI1786314, Length=488, Percent_Identity=33.6065573770492, Blast_Score=245, Evalue=5e-66, Organism=Escherichia coli, GI1789394, Length=472, Percent_Identity=30.2966101694915, Blast_Score=205, Evalue=7e-54,
Paralogues:
None
Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011706 - InterPro: IPR011707 - InterPro: IPR002355 - InterPro: IPR008972 [H]
Pfam domain/function: PF07731 Cu-oxidase_2; PF07732 Cu-oxidase_3 [H]
EC number: NA
Molecular weight: Translated: 56846; Mature: 56715
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: PS00079 MULTICOPPER_OXIDASE1 ; PS00080 MULTICOPPER_OXIDASE2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKKVYTDYFFDEPAYNTHDGGYIPLVTPKVEPQPLAIPPLLKPDRQTDTDDYYTVTAQE CCCEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC SETQFLPGKKTKTWGYNAGFLGQTIVFRNGKQTHIDLENKLPELTTFHWHGLNVPGPITD CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEHHHCCCCEEEEEEECCCCCCCCCC GGCHAPVYPGETNHIDFKVHQPAATTWLHAHPCPSTATQVWKGLATMVIIKDDVEDQLPL CCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCHHHHHHHHCCEEEEEEECCCCCCCCC PRNYGVDDIPLVLQDREFHDDNQFDYRADYDPDGVQGHTALVNGTVNPYFDVTTQRVRLR CCCCCCCCCEEEEECCCCCCCCCCCEECCCCCCCCCCCEEEEECCCCCEEEEEEEEEEEE ILDGSNRREWRLHFNDDLEFAQVASDGGILPAPVYMTKVMMTCAERDEIVVDFGQYQPGD EEECCCCEEEEEEECCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCC EVTLMTDDTPLCRFRIKSFVPDDTKLPEHLVDIPDETPTPDLPVRTITMDGMDDEVALDG CEEEEECCCCCEEHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCEEEEEECCCCCCEEECC KKFDMSRIDARQKVGDVAIWEIRNTNSTENGMVHPFHVHGTQFRVLARNDGPVYPNEHGL CCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCC KDTVGVNPGETVRIKVKFELTGVYMYHCHIIEHEDGGMMAQIESYDPQHPQTYHLMDMDT CCCCCCCCCCEEEEEEEEEEEEEEEEEEEEEEECCCCEEEEEECCCCCCCCEEEEECHHH LRNAFAKEQGIKPEDVWMPGM HHHHHHHHHCCCHHHEECCCC >Mature Secondary Structure AKKVYTDYFFDEPAYNTHDGGYIPLVTPKVEPQPLAIPPLLKPDRQTDTDDYYTVTAQE CCEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC SETQFLPGKKTKTWGYNAGFLGQTIVFRNGKQTHIDLENKLPELTTFHWHGLNVPGPITD CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEHHHCCCCEEEEEEECCCCCCCCCC GGCHAPVYPGETNHIDFKVHQPAATTWLHAHPCPSTATQVWKGLATMVIIKDDVEDQLPL CCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCHHHHHHHHCCEEEEEEECCCCCCCCC PRNYGVDDIPLVLQDREFHDDNQFDYRADYDPDGVQGHTALVNGTVNPYFDVTTQRVRLR CCCCCCCCCEEEEECCCCCCCCCCCEECCCCCCCCCCCEEEEECCCCCEEEEEEEEEEEE ILDGSNRREWRLHFNDDLEFAQVASDGGILPAPVYMTKVMMTCAERDEIVVDFGQYQPGD EEECCCCEEEEEEECCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCC EVTLMTDDTPLCRFRIKSFVPDDTKLPEHLVDIPDETPTPDLPVRTITMDGMDDEVALDG CEEEEECCCCCEEHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCEEEEEECCCCCCEEECC KKFDMSRIDARQKVGDVAIWEIRNTNSTENGMVHPFHVHGTQFRVLARNDGPVYPNEHGL CCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCC KDTVGVNPGETVRIKVKFELTGVYMYHCHIIEHEDGGMMAQIESYDPQHPQTYHLMDMDT CCCCCCCCCCEEEEEEEEEEEEEEEEEEEEEEECCCCEEEEEECCCCCCCCEEEEECHHH LRNAFAKEQGIKPEDVWMPGM HHHHHHHHHCCCHHHEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA