Click here to switch to the map view.

The map label for this gene is 28377258

Identifier: 28377258

GI number: 28377258

Start: 309851

End: 310165

Strand: Direct

Name: 28377258

Synonym: lp_0338

Alternate gene names: NA

Gene position: 309851-310165 (Clockwise)

Preceding gene: 28377257

Following gene: 28377259

Centisome position: 9.37

GC content: 51.75

Gene sequence:

>315_bases
ATGACTGAGTGGGTACCAGTGATTTACGGCATCGGTTTAGACGCTGCCGGTCGGTGCCAACATTATCACCTTGAAACTGA
TATCGCGGCATTGTGGTGTCGGCGATGTCAACACTATTACGCGTGTTACCGGTGCCATGATACGTTGTGCCAGCATACTT
TTGTGGCCAGCGCTCCGACGGATTTAGCCGTGATGTGTGGTGCTTGTCGTTATCGAATGACGGTTGATCGGTATCATGAG
GGGCAATGCCCGCACTGTCACCGGCCATTTAACCCGCGGTGTCGGTTGCATGACCAGGTTTACTTTGAAAAGTAA

Upstream 100 bases:

>100_bases
CTGAAGATATCGATGAACATGGTGGCTTAGTGGTCCGCATGTTGACCGGGGAGCGGCGGACATTTACGAGTGGTGAAGTG
ATCAGGGTAGGGTTACCAGT

Downstream 100 bases:

>100_bases
AATTGAGACGTATTTTTGGTAGTTTTGGCTTAATTCAGTGATTAATCGAAAAACAATTAAAAAATTGACATATTCTAATT
GAAAACTCATAATTAGGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: Zinc Finger CHY Domain Protein; CHY Zinc Finger Protein; Zinc Finger Protein; Helper Of Tim Protein; CHY Zinc Finger Family; Zn-Finger Protein; Zinc Finger CHY Domain-Containing Protein

Number of amino acids: Translated: 104; Mature: 103

Protein sequence:

>104_residues
MTEWVPVIYGIGLDAAGRCQHYHLETDIAALWCRRCQHYYACYRCHDTLCQHTFVASAPTDLAVMCGACRYRMTVDRYHE
GQCPHCHRPFNPRCRLHDQVYFEK

Sequences:

>Translated_104_residues
MTEWVPVIYGIGLDAAGRCQHYHLETDIAALWCRRCQHYYACYRCHDTLCQHTFVASAPTDLAVMCGACRYRMTVDRYHE
GQCPHCHRPFNPRCRLHDQVYFEK
>Mature_103_residues
TEWVPVIYGIGLDAAGRCQHYHLETDIAALWCRRCQHYYACYRCHDTLCQHTFVASAPTDLAVMCGACRYRMTVDRYHEG
QCPHCHRPFNPRCRLHDQVYFEK

Specific function: Unknown

COG id: COG4357

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6322766, Length=106, Percent_Identity=38.6792452830189, Blast_Score=79, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12269; Mature: 12138

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

10.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
13.5 %Cys+Met (Translated Protein)
10.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
12.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEWVPVIYGIGLDAAGRCQHYHLETDIAALWCRRCQHYYACYRCHDTLCQHTFVASAPT
CCCCEEEEEECCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DLAVMCGACRYRMTVDRYHEGQCPHCHRPFNPRCRLHDQVYFEK
CHHHHHHHHHHCEECCCCCCCCCCCCCCCCCCCCEECCEEEECC
>Mature Secondary Structure 
TEWVPVIYGIGLDAAGRCQHYHLETDIAALWCRRCQHYYACYRCHDTLCQHTFVASAPT
CCCEEEEEECCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DLAVMCGACRYRMTVDRYHEGQCPHCHRPFNPRCRLHDQVYFEK
CHHHHHHHHHHCEECCCCCCCCCCCCCCCCCCCCEECCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA