| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is 28377208
Identifier: 28377208
GI number: 28377208
Start: 258029
End: 258325
Strand: Direct
Name: 28377208
Synonym: lp_0284
Alternate gene names: NA
Gene position: 258029-258325 (Clockwise)
Preceding gene: 28377205
Following gene: 28377209
Centisome position: 7.8
GC content: 47.14
Gene sequence:
>297_bases GTGAGTGACATGGGACTTTTTCGTGACGCCATGCAGGCACTGTATCACAGTGGTCATTATGGTTACAACATCAATGTAAA GAAGTCGGCTCCCGCCGTTGATCCAAAGGAAGTACCAGCGATTGCGGCGTTAGGACGTATTAATCGAACGCCCAACTTTA AGACGTGGTCCGTTGATTCGCCATATAAAACGGCCGAATTTACGGCTAAATTAACTGACGCAGTAGCAACTTGTGATTTG GAAATGCAGGATCTTGAGATCAAACCGCAGATCGATGGTCGGTGGGGCGATCAATAA
Upstream 100 bases:
>100_bases CGCTTTTCCGATATTTTGACTTATTTTTATGGATTTGTGTGAACTAAATGAAAGCGTCACCGGACTTATGCTAAAATTGG ACTATGAAAATGGAAGGTAA
Downstream 100 bases:
>100_bases GCGGAATTTGTTCCCATAAATTCTAATGGTCATATTAATTTAATGATAGACCAATTAATCAATAGTGACGGGGTGAGTCA ATGTTTTCGTACGATCAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MSDMGLFRDAMQALYHSGHYGYNINVKKSAPAVDPKEVPAIAALGRINRTPNFKTWSVDSPYKTAEFTAKLTDAVATCDL EMQDLEIKPQIDGRWGDQ
Sequences:
>Translated_98_residues MSDMGLFRDAMQALYHSGHYGYNINVKKSAPAVDPKEVPAIAALGRINRTPNFKTWSVDSPYKTAEFTAKLTDAVATCDL EMQDLEIKPQIDGRWGDQ >Mature_97_residues SDMGLFRDAMQALYHSGHYGYNINVKKSAPAVDPKEVPAIAALGRINRTPNFKTWSVDSPYKTAEFTAKLTDAVATCDLE MQDLEIKPQIDGRWGDQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10919; Mature: 10788
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDMGLFRDAMQALYHSGHYGYNINVKKSAPAVDPKEVPAIAALGRINRTPNFKTWSVDS CCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHCCHHHHHHCCCCCCCCEEECCCC PYKTAEFTAKLTDAVATCDLEMQDLEIKPQIDGRWGDQ CCCCHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCC >Mature Secondary Structure SDMGLFRDAMQALYHSGHYGYNINVKKSAPAVDPKEVPAIAALGRINRTPNFKTWSVDS CCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHCCHHHHHHCCCCCCCCEEECCCC PYKTAEFTAKLTDAVATCDLEMQDLEIKPQIDGRWGDQ CCCCHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA