| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
Click here to switch to the map view.
The map label for this gene is pts5ABC [H]
Identifier: 28377191
GI number: 28377191
Start: 239927
End: 241897
Strand: Direct
Name: pts5ABC [H]
Synonym: lp_0265
Alternate gene names: 28377191
Gene position: 239927-241897 (Clockwise)
Preceding gene: 28377190
Following gene: 28377193
Centisome position: 7.25
GC content: 49.01
Gene sequence:
>1971_bases ATGATGATTATGGGAAAAATCGATGAAGTATCCATTTTAGCACCAGTTACTGGTCAAGTATTGTCATTGGCAACGGTTCC GGATCCTGTTTTTGCGGCGGGAAGGGTAGGGCCGGGATTTGGTGTTCAGCCGACAGCTGGTCACATCTTGGCACCAGTTA GTGGTCGAATCACAGTAGTCGCAACAACCAAACATGCAATTGGCATGGTGACTACGACTGGCCTCGAAGTGTTGGTACAT CTGGGTGTCGATACGGTGGCACTCAATGGGGCACCGTTTGAAGTTCACGTGAAGGTCGGTGATGAGGTGACGGCTGGCAC ACTACTAGTCGACATGGATTTAGCTGCTATCGAGCAGGCCCACAAACCGACCACGGTGATCATTGTCGTGACGAACGCTC AGCGGGTACTCACTGACTTGACGCTAGCCCCACTGCCACAAGCTGTCGCGGCCGGTGCAGTCGTCGCAACGGCTCACTTG ATAACAGTGACAACAACCGCGTCACCGGTAGTGGCAGCGGTGACGCAGTCAACGACGCGTTACTCGGCATTAGCTACGGC AATTGTAGCCAATGTGGGCGGGCAACAAAATATTAATAGCGTGATTCATTGTATAACACGGTTGCGATTTTATTTGAAGG ATGAAGCACTAGCGCACGATGCGGTTATTGCGAACTTGGACGGCGTCATTGATGTTGCAAAGGCCGGTGGTCAGTATCAA GTTGTGATTGGTCCGGCAGTCAACGATGTTTTTGATGCAGTGATCGCACAACTAGGGCCTGAATTTGCGGACGGAGTGCC AGTACCACCGGTTCAGGAGGCATCAAGTGACGTTAATTGGCTAAGCCACGTGCGTAATGGCATTAGTGGTGTCATTGGTG TTATGACCGCGGCAATGATTCCGGTGATTGGCATTTTGGCAGGTTCAGGGATTTTAAAAGGAATCTTGGCCGCGTTAACG GGCTTCAAAGTCTTGGCGGTCACGAGTGGGACGTATATGGTATTTAACGCGGTAGCTGATGCAACGTTTTACTTTTTACC AGTTGTCCTAGGCTTTACTGCTGCCAAAAAGTTAGGTTCAGATCCAATCGTGCTGGCGATTGTCGGTGCTGTTCTTATCT ATCCAAGTCTGATAACGGCAGCTAGTAAGGGAGCCACGGCCCAAATCACGTTCTTAGGTGTTCCGACGCATTTAATGTCG TATTCGGCATCCGTGTTCCCGATGATTGTGGCTGCATGGCTAGGCGTGTACGTTGAGCGGGGGTTAAAACGAGTTGTTCC GCTGTATTTACGGAGCGTCTTTATTCCGATTATCGAAGCCCTGATTTTGGCGATAGTGGTATTAGTGGTGGTCGGTCCCT TAATTACGATTATCAGTAAGGGCTTGGCCAACGGTTTGGTCGCCGTCTATAATTTTAGCCCGGCCTTATCAGGATTGGTT ATTGGTGGTTTATACCAGACGATGGTCATTTTCGGGCTCCACTGGGGCATTATTCCCATTGTGATCAATGATATTGCGAC GAATGGGCACAGTTATTTGAATGCAATCCTCTCGATTACCATGGTCGCTCAGGGTGGTGCGGTGTTGGCCGTCTTCTTAA AGTCTAAGGATAAGCACCTAAAGGAGATCTCACTGGCAGCTGCAATTTCAGCCTTTTGTGGTGTTACCGAGCCGGCGCTA TACGGGGTCAACTTGAAATACAAACGGGTCTTTGTCGTTGCTAGCATTGCGAGTGGTCTAGGTGGCTTACTGACCGGTCT GTTACGCGTTAATAACTATGCTTTGTCAGGGTCGTTGATCGGTTTCCCCGCGTTTATCACCCCGGGTGTCGGCATCGGGT CAAATTTTTATGGTTATTTGATATCCCATTACGGGACACTAGTGATTGCAACGATGTTAGTTTATGTATTTGGCTTTTCG GATAAGTTGTTAGGTCCTAAGGAAAACTTAAAAGCGACTAATAATCAGTAA
Upstream 100 bases:
>100_bases TGGTCTAATTGTGATGATAGAATTTTAATGGATCATGATTGGACGTGAGACGGTCGTCTTAAGGATTTTTGAAGGTTAGG TTAAGGGTTTTACATGGGGG
Downstream 100 bases:
>100_bases CTAAAATAAGGCTCCTGCTGAACGTAGCGGGGGTCTTATTTTTATGAACTAATCGCTTGCAAGCGTGCTTGTTGTCGAAT CGCTTCAACATAAATGCGGA
Product: beta-glucosides PTS, EIIABC
Products: NA
Alternate protein names: EIIBCA-Bgl; EII-Bgl; Beta-glucoside-specific phosphotransferase enzyme IIB component; PTS system beta-glucoside-specific EIIB component; Beta-glucoside permease IIC component; PTS system beta-glucoside-specific EIIC component; Beta-glucoside-specific phosphotransferase enzyme IIA component; PTS system beta-glucoside-specific EIIA component [H]
Number of amino acids: Translated: 656; Mature: 656
Protein sequence:
>656_residues MMIMGKIDEVSILAPVTGQVLSLATVPDPVFAAGRVGPGFGVQPTAGHILAPVSGRITVVATTKHAIGMVTTTGLEVLVH LGVDTVALNGAPFEVHVKVGDEVTAGTLLVDMDLAAIEQAHKPTTVIIVVTNAQRVLTDLTLAPLPQAVAAGAVVATAHL ITVTTTASPVVAAVTQSTTRYSALATAIVANVGGQQNINSVIHCITRLRFYLKDEALAHDAVIANLDGVIDVAKAGGQYQ VVIGPAVNDVFDAVIAQLGPEFADGVPVPPVQEASSDVNWLSHVRNGISGVIGVMTAAMIPVIGILAGSGILKGILAALT GFKVLAVTSGTYMVFNAVADATFYFLPVVLGFTAAKKLGSDPIVLAIVGAVLIYPSLITAASKGATAQITFLGVPTHLMS YSASVFPMIVAAWLGVYVERGLKRVVPLYLRSVFIPIIEALILAIVVLVVVGPLITIISKGLANGLVAVYNFSPALSGLV IGGLYQTMVIFGLHWGIIPIVINDIATNGHSYLNAILSITMVAQGGAVLAVFLKSKDKHLKEISLAAAISAFCGVTEPAL YGVNLKYKRVFVVASIASGLGGLLTGLLRVNNYALSGSLIGFPAFITPGVGIGSNFYGYLISHYGTLVIATMLVYVFGFS DKLLGPKENLKATNNQ
Sequences:
>Translated_656_residues MMIMGKIDEVSILAPVTGQVLSLATVPDPVFAAGRVGPGFGVQPTAGHILAPVSGRITVVATTKHAIGMVTTTGLEVLVH LGVDTVALNGAPFEVHVKVGDEVTAGTLLVDMDLAAIEQAHKPTTVIIVVTNAQRVLTDLTLAPLPQAVAAGAVVATAHL ITVTTTASPVVAAVTQSTTRYSALATAIVANVGGQQNINSVIHCITRLRFYLKDEALAHDAVIANLDGVIDVAKAGGQYQ VVIGPAVNDVFDAVIAQLGPEFADGVPVPPVQEASSDVNWLSHVRNGISGVIGVMTAAMIPVIGILAGSGILKGILAALT GFKVLAVTSGTYMVFNAVADATFYFLPVVLGFTAAKKLGSDPIVLAIVGAVLIYPSLITAASKGATAQITFLGVPTHLMS YSASVFPMIVAAWLGVYVERGLKRVVPLYLRSVFIPIIEALILAIVVLVVVGPLITIISKGLANGLVAVYNFSPALSGLV IGGLYQTMVIFGLHWGIIPIVINDIATNGHSYLNAILSITMVAQGGAVLAVFLKSKDKHLKEISLAAAISAFCGVTEPAL YGVNLKYKRVFVVASIASGLGGLLTGLLRVNNYALSGSLIGFPAFITPGVGIGSNFYGYLISHYGTLVIATMLVYVFGFS DKLLGPKENLKATNNQ >Mature_656_residues MMIMGKIDEVSILAPVTGQVLSLATVPDPVFAAGRVGPGFGVQPTAGHILAPVSGRITVVATTKHAIGMVTTTGLEVLVH LGVDTVALNGAPFEVHVKVGDEVTAGTLLVDMDLAAIEQAHKPTTVIIVVTNAQRVLTDLTLAPLPQAVAAGAVVATAHL ITVTTTASPVVAAVTQSTTRYSALATAIVANVGGQQNINSVIHCITRLRFYLKDEALAHDAVIANLDGVIDVAKAGGQYQ VVIGPAVNDVFDAVIAQLGPEFADGVPVPPVQEASSDVNWLSHVRNGISGVIGVMTAAMIPVIGILAGSGILKGILAALT GFKVLAVTSGTYMVFNAVADATFYFLPVVLGFTAAKKLGSDPIVLAIVGAVLIYPSLITAASKGATAQITFLGVPTHLMS YSASVFPMIVAAWLGVYVERGLKRVVPLYLRSVFIPIIEALILAIVVLVVVGPLITIISKGLANGLVAVYNFSPALSGLV IGGLYQTMVIFGLHWGIIPIVINDIATNGHSYLNAILSITMVAQGGAVLAVFLKSKDKHLKEISLAAAISAFCGVTEPAL YGVNLKYKRVFVVASIASGLGGLLTGLLRVNNYALSGSLIGFPAFITPGVGIGSNFYGYLISHYGTLVIATMLVYVFGFS DKLLGPKENLKATNNQ
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1263
COG function: function code G; Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790159, Length=449, Percent_Identity=38.7527839643653, Blast_Score=301, Evalue=1e-82, Organism=Escherichia coli, GI48994906, Length=425, Percent_Identity=29.4117647058824, Blast_Score=180, Evalue=3e-46, Organism=Escherichia coli, GI2367362, Length=404, Percent_Identity=32.9207920792079, Blast_Score=177, Evalue=2e-45, Organism=Escherichia coli, GI1788769, Length=419, Percent_Identity=28.4009546539379, Blast_Score=111, Evalue=1e-25, Organism=Escherichia coli, GI1788757, Length=127, Percent_Identity=34.6456692913386, Blast_Score=92, Evalue=8e-20, Organism=Escherichia coli, GI1786894, Length=122, Percent_Identity=36.8852459016393, Blast_Score=91, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011055 - InterPro: IPR018113 - InterPro: IPR001127 - InterPro: IPR001996 - InterPro: IPR003352 - InterPro: IPR013013 - InterPro: IPR011297 [H]
Pfam domain/function: PF00358 PTS_EIIA_1; PF00367 PTS_EIIB; PF02378 PTS_EIIC [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 67846; Mature: 67846
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: PS00371 PTS_EIIA_TYPE_1_HIS ; PS51093 PTS_EIIA_TYPE_1 ; PS01035 PTS_EIIB_TYPE_1_CYS ; PS51098 PTS_EIIB_TYPE_1 ; PS51103 PTS_EIIC_TYPE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMIMGKIDEVSILAPVTGQVLSLATVPDPVFAAGRVGPGFGVQPTAGHILAPVSGRITVV CEEECCCCCEEEECCCCCCCEEEECCCCCHHCCCCCCCCCCCCCCCCCEEECCCCCEEEE ATTKHAIGMVTTTGLEVLVHLGVDTVALNGAPFEVHVKVGDEVTAGTLLVDMDLAAIEQA EECCCHHHEEEHHHHHHHHHCCCCEEEECCCCEEEEEEECCCEEECEEEEECCHHHHHHC HKPTTVIIVVTNAQRVLTDLTLAPLPQAVAAGAVVATAHLITVTTTASPVVAAVTQSTTR CCCEEEEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHEEEEEEEECCCCHHHHHHHCHHH YSALATAIVANVGGQQNINSVIHCITRLRFYLKDEALAHDAVIANLDGVIDVAKAGGQYQ HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCEEE VVIGPAVNDVFDAVIAQLGPEFADGVPVPPVQEASSDVNWLSHVRNGISGVIGVMTAAMI EEECCCHHHHHHHHHHHHCCHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH PVIGILAGSGILKGILAALTGFKVLAVTSGTYMVFNAVADATFYFLPVVLGFTAAKKLGS HHHHHHHCCHHHHHHHHHHCCCEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCC DPIVLAIVGAVLIYPSLITAASKGATAQITFLGVPTHLMSYSASVFPMIVAAWLGVYVER CCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHCCCHHHHHHHHHHHHHHHHH GLKRVVPLYLRSVFIPIIEALILAIVVLVVVGPLITIISKGLANGLVAVYNFSPALSGLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHH IGGLYQTMVIFGLHWGIIPIVINDIATNGHSYLNAILSITMVAQGGAVLAVFLKSKDKHL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCHHH KEISLAAAISAFCGVTEPALYGVNLKYKRVFVVASIASGLGGLLTGLLRVNNYALSGSLI HHHHHHHHHHHHHCCCCCCEECCCEEEEHEEEEHHHHHHHHHHHHHHHHHCCEEECCCCC GFPAFITPGVGIGSNFYGYLISHYGTLVIATMLVYVFGFSDKLLGPKENLKATNNQ CCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCC >Mature Secondary Structure MMIMGKIDEVSILAPVTGQVLSLATVPDPVFAAGRVGPGFGVQPTAGHILAPVSGRITVV CEEECCCCCEEEECCCCCCCEEEECCCCCHHCCCCCCCCCCCCCCCCCEEECCCCCEEEE ATTKHAIGMVTTTGLEVLVHLGVDTVALNGAPFEVHVKVGDEVTAGTLLVDMDLAAIEQA EECCCHHHEEEHHHHHHHHHCCCCEEEECCCCEEEEEEECCCEEECEEEEECCHHHHHHC HKPTTVIIVVTNAQRVLTDLTLAPLPQAVAAGAVVATAHLITVTTTASPVVAAVTQSTTR CCCEEEEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHEEEEEEEECCCCHHHHHHHCHHH YSALATAIVANVGGQQNINSVIHCITRLRFYLKDEALAHDAVIANLDGVIDVAKAGGQYQ HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCEEE VVIGPAVNDVFDAVIAQLGPEFADGVPVPPVQEASSDVNWLSHVRNGISGVIGVMTAAMI EEECCCHHHHHHHHHHHHCCHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH PVIGILAGSGILKGILAALTGFKVLAVTSGTYMVFNAVADATFYFLPVVLGFTAAKKLGS HHHHHHHCCHHHHHHHHHHCCCEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCC DPIVLAIVGAVLIYPSLITAASKGATAQITFLGVPTHLMSYSASVFPMIVAAWLGVYVER CCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHCCCHHHHHHHHHHHHHHHHH GLKRVVPLYLRSVFIPIIEALILAIVVLVVVGPLITIISKGLANGLVAVYNFSPALSGLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHH IGGLYQTMVIFGLHWGIIPIVINDIATNGHSYLNAILSITMVAQGGAVLAVFLKSKDKHL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCHHH KEISLAAAISAFCGVTEPALYGVNLKYKRVFVVASIASGLGGLLTGLLRVNNYALSGSLI HHHHHHHHHHHHHCCCCCCEECCCEEEEHEEEEHHHHHHHHHHHHHHHHHCCEEECCCCC GFPAFITPGVGIGSNFYGYLISHYGTLVIATMLVYVFGFSDKLLGPKENLKATNNQ CCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]