| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is pts4ABC [H]
Identifier: 28377190
GI number: 28377190
Start: 237710
End: 239707
Strand: Direct
Name: pts4ABC [H]
Synonym: lp_0264
Alternate gene names: 28377190
Gene position: 237710-239707 (Clockwise)
Preceding gene: 28377189
Following gene: 28377191
Centisome position: 7.19
GC content: 47.7
Gene sequence:
>1998_bases ATGGCAAAGGCACAAACAGTAACAATTTTGTCGCCGGTCAATGGGGACGTTATTGCGTTAAATAAGGTTAAAGACCCGGT CTTTTCAGCCGGTATGATGGGACTGGGCTTTGGCGTTCAACCTTCAAGTGGAGAAGTTGTTGCACCAGTCAGTGGTCAGG TCACGATGGTGGCTGAGACGAAACACGCGATTGGGTTCACAACGCCTGATGATCATTTGGAAGTATTAGTGCATCTCGGA ATCGACACGGTCGACTTAAAGGGTGCCCCGTTCACGGTCAAAGTGGCCGCGGGCGATGATGTTCAGGCGGGGGACGTGAT TGCCACCATGGATTTAGCTGCTATTCAAGCCGCTAATCGTCAGACCACAGTGATTTTAGCAGTGACTAACACTAGTGATA AATTAGAATCGTTGGACGTCGTTACGGGGGCAAAAGCTGCCGGTGACGTGACAGCTACGGGCCGTCTGAACGCCAACACA TTTAATGCTAAGCGGCAGAATCGATTACCAAAAGCGGGTAAATATGATCAGTTAGCCGCGGACATCGTGGCTAATGTTGG TGGTGTCGAGAATGTTAGTAGTTTGATTCACTGCATTACTCGCTTGCGTTTTTATTTGAAAGATGAGAGTAAAGCCAATG ATGACGTCGTGCGGGACTTAAAAGGGGTCATCGACGTAGCAAAAGCGGGCGGTCAATATCAGGTCGTGATTGGTCCTGCT GTCACGGATGTCTATGATGCGATCATCAAGCAAATCGGACCGGGATTTTCAAATGATTCGGAGACGGCTAAAGCTGTTGC TGAGACTGCCGCAGCAGCTCAGCGGCCAACGACGCCGTGGGGCAAAGTTAAATGGGGTATCAGTAATTTAATTGGTGTTA TCACGGGTTCAATGATTCCCGTCATTGGATTATTAGCAGCCTCTGGTATTTTAAAAGGAATTCTTGCGTTACTTACCACG TTTAATTTAGTTAGCCCGACCGCACCAACGTACGTGATTATTAATGCGATGGGCGACTCGGTCTTTTACTTCCTGCCAAT CTTCGTCGGTTTTACGGCTGGTAAAAAGTTAGGGGCAGATCCGGTGATTATGGGAATCATCGGTGGGGTGCTGACTTATC CAGCTATTGTAACGATGGCAAGTGGTAAAGCGACGAGTACGCTTTTAGGAATGGGGATCAACGCGAACTTCTTTGGCTTG CCGGTACACGTTGCCTCGTATACGTATTCAATTTTCCCGATGATTGCGGGGGCCTGGCTAGCAAGTAAGTTGGAACCATG GCTAAAACGGGTGATTCCAACGGTATTACGAATGATTTTTGTGCCATTATTTGAAGTTGTGATTGTTTCCGGTGCGATTC TATTATTCCTTGGTCCAATTATTACTGTGCTTTCAACGGGATTGGCAAATATTATTGTGTGGGTCTACAATTTGAGCCCT GCGATTTCTGGCTTAATCATTGGTGGCTTCTATCAAGTATTGGTGATCTTCGGGTTGCACTGGGCGGTTATTCCGATTGT GGCCAACGATATTGCAACGACGGGTCACAGTTACTTGAACGCGATTGTTTCAGCGACGATGGTTGCCCAGGGGGGCGCAG TATTCGCAATCGCCTTAAAGTCAAAGCTGGCTAACATTCAAGAACTTGCTTGGCCAGCAACGATTTCAGCCTTCTGTGGT GTTACCGAACCAGCCATGTACGGGATCAACTTGAAATATGGTCGGGCCTTTGTGACTGCCAGTATTGGGGCGGCAGTTGG TGGCTTCTTGACCGGCTTGATGAATGTCAATATGTGGGGCTTTACGGGTTCACTGATTGGCTTCACGTCCTTTGTTAATC CGAAGGGCTTGGACTTTAGTTTTTATGGTTTCTTGATTGCATCCGCAGCCACGATTGTCGTGTCCTTCGCTTTAACTTGG ATGTTTGGTTTTAAGGATGAGGATGCAAATGCAGTTAAAGTAGCGCCTAAAAAGCGACACTTAGGTGCAACCGCCTAG
Upstream 100 bases:
>100_bases TTACTTTCCAATTATCAAGATGTTAATGTCACAGCACAATTGACGATGCAACCCTATCAAGCGGTTGCGCTGTTGTTAGG TTAAGAATGGAGGAATGGGT
Downstream 100 bases:
>100_bases TTAATGGCGACGTCAAATAATTAATCAACGTTAGGATAAACAAGTATTTTTCCGATTCGGAAAAATGCTTGTTTTTGATA TTTAGTCGCCCTAACGAAGT
Product: beta-glucosides PTS, EIIABC
Products: NA
Alternate protein names: EIIBCA-Bgl; EII-Bgl; Beta-glucoside-specific phosphotransferase enzyme IIB component; PTS system beta-glucoside-specific EIIB component; Beta-glucoside permease IIC component; PTS system beta-glucoside-specific EIIC component; Beta-glucoside-specific phosphotransferase enzyme IIA component; PTS system beta-glucoside-specific EIIA component [H]
Number of amino acids: Translated: 665; Mature: 664
Protein sequence:
>665_residues MAKAQTVTILSPVNGDVIALNKVKDPVFSAGMMGLGFGVQPSSGEVVAPVSGQVTMVAETKHAIGFTTPDDHLEVLVHLG IDTVDLKGAPFTVKVAAGDDVQAGDVIATMDLAAIQAANRQTTVILAVTNTSDKLESLDVVTGAKAAGDVTATGRLNANT FNAKRQNRLPKAGKYDQLAADIVANVGGVENVSSLIHCITRLRFYLKDESKANDDVVRDLKGVIDVAKAGGQYQVVIGPA VTDVYDAIIKQIGPGFSNDSETAKAVAETAAAAQRPTTPWGKVKWGISNLIGVITGSMIPVIGLLAASGILKGILALLTT FNLVSPTAPTYVIINAMGDSVFYFLPIFVGFTAGKKLGADPVIMGIIGGVLTYPAIVTMASGKATSTLLGMGINANFFGL PVHVASYTYSIFPMIAGAWLASKLEPWLKRVIPTVLRMIFVPLFEVVIVSGAILLFLGPIITVLSTGLANIIVWVYNLSP AISGLIIGGFYQVLVIFGLHWAVIPIVANDIATTGHSYLNAIVSATMVAQGGAVFAIALKSKLANIQELAWPATISAFCG VTEPAMYGINLKYGRAFVTASIGAAVGGFLTGLMNVNMWGFTGSLIGFTSFVNPKGLDFSFYGFLIASAATIVVSFALTW MFGFKDEDANAVKVAPKKRHLGATA
Sequences:
>Translated_665_residues MAKAQTVTILSPVNGDVIALNKVKDPVFSAGMMGLGFGVQPSSGEVVAPVSGQVTMVAETKHAIGFTTPDDHLEVLVHLG IDTVDLKGAPFTVKVAAGDDVQAGDVIATMDLAAIQAANRQTTVILAVTNTSDKLESLDVVTGAKAAGDVTATGRLNANT FNAKRQNRLPKAGKYDQLAADIVANVGGVENVSSLIHCITRLRFYLKDESKANDDVVRDLKGVIDVAKAGGQYQVVIGPA VTDVYDAIIKQIGPGFSNDSETAKAVAETAAAAQRPTTPWGKVKWGISNLIGVITGSMIPVIGLLAASGILKGILALLTT FNLVSPTAPTYVIINAMGDSVFYFLPIFVGFTAGKKLGADPVIMGIIGGVLTYPAIVTMASGKATSTLLGMGINANFFGL PVHVASYTYSIFPMIAGAWLASKLEPWLKRVIPTVLRMIFVPLFEVVIVSGAILLFLGPIITVLSTGLANIIVWVYNLSP AISGLIIGGFYQVLVIFGLHWAVIPIVANDIATTGHSYLNAIVSATMVAQGGAVFAIALKSKLANIQELAWPATISAFCG VTEPAMYGINLKYGRAFVTASIGAAVGGFLTGLMNVNMWGFTGSLIGFTSFVNPKGLDFSFYGFLIASAATIVVSFALTW MFGFKDEDANAVKVAPKKRHLGATA >Mature_664_residues AKAQTVTILSPVNGDVIALNKVKDPVFSAGMMGLGFGVQPSSGEVVAPVSGQVTMVAETKHAIGFTTPDDHLEVLVHLGI DTVDLKGAPFTVKVAAGDDVQAGDVIATMDLAAIQAANRQTTVILAVTNTSDKLESLDVVTGAKAAGDVTATGRLNANTF NAKRQNRLPKAGKYDQLAADIVANVGGVENVSSLIHCITRLRFYLKDESKANDDVVRDLKGVIDVAKAGGQYQVVIGPAV TDVYDAIIKQIGPGFSNDSETAKAVAETAAAAQRPTTPWGKVKWGISNLIGVITGSMIPVIGLLAASGILKGILALLTTF NLVSPTAPTYVIINAMGDSVFYFLPIFVGFTAGKKLGADPVIMGIIGGVLTYPAIVTMASGKATSTLLGMGINANFFGLP VHVASYTYSIFPMIAGAWLASKLEPWLKRVIPTVLRMIFVPLFEVVIVSGAILLFLGPIITVLSTGLANIIVWVYNLSPA ISGLIIGGFYQVLVIFGLHWAVIPIVANDIATTGHSYLNAIVSATMVAQGGAVFAIALKSKLANIQELAWPATISAFCGV TEPAMYGINLKYGRAFVTASIGAAVGGFLTGLMNVNMWGFTGSLIGFTSFVNPKGLDFSFYGFLIASAATIVVSFALTWM FGFKDEDANAVKVAPKKRHLGATA
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1263
COG function: function code G; Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790159, Length=485, Percent_Identity=35.4639175257732, Blast_Score=298, Evalue=7e-82, Organism=Escherichia coli, GI48994906, Length=488, Percent_Identity=26.844262295082, Blast_Score=181, Evalue=2e-46, Organism=Escherichia coli, GI2367362, Length=436, Percent_Identity=28.8990825688073, Blast_Score=158, Evalue=1e-39, Organism=Escherichia coli, GI1788769, Length=454, Percent_Identity=27.3127753303965, Blast_Score=114, Evalue=2e-26, Organism=Escherichia coli, GI1788757, Length=144, Percent_Identity=31.25, Blast_Score=85, Evalue=1e-17, Organism=Escherichia coli, GI1786894, Length=125, Percent_Identity=36.8, Blast_Score=83, Evalue=6e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011055 - InterPro: IPR018113 - InterPro: IPR001127 - InterPro: IPR001996 - InterPro: IPR003352 - InterPro: IPR013013 - InterPro: IPR011297 [H]
Pfam domain/function: PF00358 PTS_EIIA_1; PF00367 PTS_EIIB; PF02378 PTS_EIIC [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 69491; Mature: 69360
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: PS51093 PTS_EIIA_TYPE_1 ; PS01035 PTS_EIIB_TYPE_1_CYS ; PS51098 PTS_EIIB_TYPE_1 ; PS51103 PTS_EIIC_TYPE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKAQTVTILSPVNGDVIALNKVKDPVFSAGMMGLGFGVQPSSGEVVAPVSGQVTMVAET CCCCEEEEEEECCCCCEEEEECCCCHHHHCCHHHCCCCCCCCCCCEEEECCCCEEEEEEC KHAIGFTTPDDHLEVLVHLGIDTVDLKGAPFTVKVAAGDDVQAGDVIATMDLAAIQAANR CCCCCCCCCCHHHHHHHHCCCCEEECCCCCEEEEEECCCCCCCCCEEEHHHHHHHHHCCC QTTVILAVTNTSDKLESLDVVTGAKAAGDVTATGRLNANTFNAKRQNRLPKAGKYDQLAA CEEEEEEEECCCHHHHHHHHHCCCCCCCCEEECCEECCCCCCCHHHHCCCCCCCHHHHHH DIVANVGGVENVSSLIHCITRLRFYLKDESKANDDVVRDLKGVIDVAKAGGQYQVVIGPA HHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCH VTDVYDAIIKQIGPGFSNDSETAKAVAETAAAAQRPTTPWGKVKWGISNLIGVITGSMIP HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH VIGLLAASGILKGILALLTTFNLVSPTAPTYVIINAMGDSVFYFLPIFVGFTAGKKLGAD HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCC PVIMGIIGGVLTYPAIVTMASGKATSTLLGMGINANFFGLPVHVASYTYSIFPMIAGAWL HHHHHHHHHHHHHHHHEEECCCCCHHHHEECCCCCCEEECEEEHHHHHHHHHHHHHHHHH ASKLEPWLKRVIPTVLRMIFVPLFEVVIVSGAILLFLGPIITVLSTGLANIIVWVYNLSP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCH AISGLIIGGFYQVLVIFGLHWAVIPIVANDIATTGHSYLNAIVSATMVAQGGAVFAIALK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCEEEEEHH SKLANIQELAWPATISAFCGVTEPAMYGINLKYGRAFVTASIGAAVGGFLTGLMNVNMWG HHHHHHHHHHCHHHHHHHCCCCCCCEEEEEEECCCEEEEHHHHHHHHHHHHHHHHCEECC FTGSLIGFTSFVNPKGLDFSFYGFLIASAATIVVSFALTWMFGFKDEDANAVKVAPKKRH CCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCC LGATA CCCCC >Mature Secondary Structure AKAQTVTILSPVNGDVIALNKVKDPVFSAGMMGLGFGVQPSSGEVVAPVSGQVTMVAET CCCEEEEEEECCCCCEEEEECCCCHHHHCCHHHCCCCCCCCCCCEEEECCCCEEEEEEC KHAIGFTTPDDHLEVLVHLGIDTVDLKGAPFTVKVAAGDDVQAGDVIATMDLAAIQAANR CCCCCCCCCCHHHHHHHHCCCCEEECCCCCEEEEEECCCCCCCCCEEEHHHHHHHHHCCC QTTVILAVTNTSDKLESLDVVTGAKAAGDVTATGRLNANTFNAKRQNRLPKAGKYDQLAA CEEEEEEEECCCHHHHHHHHHCCCCCCCCEEECCEECCCCCCCHHHHCCCCCCCHHHHHH DIVANVGGVENVSSLIHCITRLRFYLKDESKANDDVVRDLKGVIDVAKAGGQYQVVIGPA HHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCH VTDVYDAIIKQIGPGFSNDSETAKAVAETAAAAQRPTTPWGKVKWGISNLIGVITGSMIP HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH VIGLLAASGILKGILALLTTFNLVSPTAPTYVIINAMGDSVFYFLPIFVGFTAGKKLGAD HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCC PVIMGIIGGVLTYPAIVTMASGKATSTLLGMGINANFFGLPVHVASYTYSIFPMIAGAWL HHHHHHHHHHHHHHHHEEECCCCCHHHHEECCCCCCEEECEEEHHHHHHHHHHHHHHHHH ASKLEPWLKRVIPTVLRMIFVPLFEVVIVSGAILLFLGPIITVLSTGLANIIVWVYNLSP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCH AISGLIIGGFYQVLVIFGLHWAVIPIVANDIATTGHSYLNAIVSATMVAQGGAVFAIALK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCEEEEEHH SKLANIQELAWPATISAFCGVTEPAMYGINLKYGRAFVTASIGAAVGGFLTGLMNVNMWG HHHHHHHHHHCHHHHHHHCCCCCCCEEEEEEECCCEEEEHHHHHHHHHHHHHHHHCEECC FTGSLIGFTSFVNPKGLDFSFYGFLIASAATIVVSFALTWMFGFKDEDANAVKVAPKKRH CCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCC LGATA CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]