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The map label for this gene is ybxG [H]

Identifier: 28377069

GI number: 28377069

Start: 106392

End: 107756

Strand: Direct

Name: ybxG [H]

Synonym: lp_0120

Alternate gene names: 28377069

Gene position: 106392-107756 (Clockwise)

Preceding gene: 28377067

Following gene: 28377070

Centisome position: 3.22

GC content: 44.32

Gene sequence:

>1365_bases
ATGCAGAGAAAATTAAGTACGGGCCAGATGCAAATGATTGCACTGGGCGGCACGATCGGAGTGGGCCTATTTATGGGATC
CAGCTCAACGATCAAGTGGACCGGGCCGTCAGTGCTAATTGCGTACATCGTATCAGGGGCCTTTCTATACCTGATTATGC
GGGCACTAGGTGAGATGCTGTATGTCGATCCGAATACCGGTTCGTTTGCCAAGTTTGCTTCTGAATATATTCACCCCGTT
TTTGGATACTTGACGGCTTGGAGCAACATTTTTCAGTTCGTCGTTGTTGGGATGAGTGAAATGATTGCACTAGGCGGCTA
CTGCCGGTATTGGTGGCCGAACTTGCCAGATTGGATTCCGGGCCTAATTGCCATTGTATTCTTATGTGCGGCCAACCTTA
TCTCGGTTAAAATGTTTGGGACACTGGAAACCTGGTTCTCACTTATTAAAGTGGTGACGATTATTCTGATGATTATTGCC
GGTTTAGGTCTGATTATTTTTGGTATTGGTAACGGCGGTCATCCAATTGGAATCAGTAACCTGTGGACCCATGGTGGTTT
CTTCACTGGTGGGGTGAAGGGCTTTGTCTTCGCACTAGCAATTGTGTTGGCGTCGTATCAAGGGATTGAATTGATTGGAG
TCACAGCTGGTGAAGCTGAAAATCCACAAAGCACGATCGTTAAAGCGATTCGTTCAACGGTTGCCCGGATTTTAATCTTT
TACGTGGGTGCCATCTTCGTAATTGTCAGCATTTACCCCTGGGATAAGTTAAGCCAGATTGGTTCACCGTTTGTACAGAC
ATTTGCCAAAATTGGGATTACCGCTGCGGCTTCGATTATCAACTTCGTGGTTATTACGGCTTCCTTATCGGGAACAAATT
CTGGAATTTATAGTGCGAGTCGAATGACTTACACGTTGGCGGAAAGTCACCAGTTACCAAGGAAGATGACTTTATTAAAT
CGTCATGGAGTACCATTTTATTCCGTTATTGCGATTGCGACTGGGATTCTAATTGGAGTCGTCTTGAATGTTGTGTTACC
AATGTTTTTCAAGGATGCTAGCGAGATTTTCGTGATGGTTTACAGTTCGAGTGTCTTGCCCGGTATGGTACCGTGGTTTG
TTATTCTAGTGAGTCAAATTGCGTTCCGTAAGCAAAACGCAGCCAAGATGGCGAACCATCCTTTTAAAATGCCATTATCA
CCCTATTCAAATTATTTAACGTTGGCCTTCCTCGCGTTAACACTGGTCTTCATGTTTATTAATCCGGAAACGCGCTACTC
AATTTTAGTCGGTGTTGTATTTCTGGTCATCATGACATTGATTTATTTCCGTAAATACGCCGGTAACAAGGAAGAAACGT
TGTAA

Upstream 100 bases:

>100_bases
AATCCGTTTGCGTCGGTGCACTTTTTTAGCTAAGATAAAAGCTATATACTGTCAGCCGTGATAGTGTGAGTTCTTTGATT
TTATGAAAAGAGAGTAATTT

Downstream 100 bases:

>100_bases
TCAAGAGTACTTGCCAGTAAATGGTAAGTGCTTTTATTTTGGGCTTTTATTGCGTTAAAATTAGATATCAATATAATTAT
CAGGAAAAGTGGTGGCACGA

Product: amino acid transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 454; Mature: 454

Protein sequence:

>454_residues
MQRKLSTGQMQMIALGGTIGVGLFMGSSSTIKWTGPSVLIAYIVSGAFLYLIMRALGEMLYVDPNTGSFAKFASEYIHPV
FGYLTAWSNIFQFVVVGMSEMIALGGYCRYWWPNLPDWIPGLIAIVFLCAANLISVKMFGTLETWFSLIKVVTIILMIIA
GLGLIIFGIGNGGHPIGISNLWTHGGFFTGGVKGFVFALAIVLASYQGIELIGVTAGEAENPQSTIVKAIRSTVARILIF
YVGAIFVIVSIYPWDKLSQIGSPFVQTFAKIGITAAASIINFVVITASLSGTNSGIYSASRMTYTLAESHQLPRKMTLLN
RHGVPFYSVIAIATGILIGVVLNVVLPMFFKDASEIFVMVYSSSVLPGMVPWFVILVSQIAFRKQNAAKMANHPFKMPLS
PYSNYLTLAFLALTLVFMFINPETRYSILVGVVFLVIMTLIYFRKYAGNKEETL

Sequences:

>Translated_454_residues
MQRKLSTGQMQMIALGGTIGVGLFMGSSSTIKWTGPSVLIAYIVSGAFLYLIMRALGEMLYVDPNTGSFAKFASEYIHPV
FGYLTAWSNIFQFVVVGMSEMIALGGYCRYWWPNLPDWIPGLIAIVFLCAANLISVKMFGTLETWFSLIKVVTIILMIIA
GLGLIIFGIGNGGHPIGISNLWTHGGFFTGGVKGFVFALAIVLASYQGIELIGVTAGEAENPQSTIVKAIRSTVARILIF
YVGAIFVIVSIYPWDKLSQIGSPFVQTFAKIGITAAASIINFVVITASLSGTNSGIYSASRMTYTLAESHQLPRKMTLLN
RHGVPFYSVIAIATGILIGVVLNVVLPMFFKDASEIFVMVYSSSVLPGMVPWFVILVSQIAFRKQNAAKMANHPFKMPLS
PYSNYLTLAFLALTLVFMFINPETRYSILVGVVFLVIMTLIYFRKYAGNKEETL
>Mature_454_residues
MQRKLSTGQMQMIALGGTIGVGLFMGSSSTIKWTGPSVLIAYIVSGAFLYLIMRALGEMLYVDPNTGSFAKFASEYIHPV
FGYLTAWSNIFQFVVVGMSEMIALGGYCRYWWPNLPDWIPGLIAIVFLCAANLISVKMFGTLETWFSLIKVVTIILMIIA
GLGLIIFGIGNGGHPIGISNLWTHGGFFTGGVKGFVFALAIVLASYQGIELIGVTAGEAENPQSTIVKAIRSTVARILIF
YVGAIFVIVSIYPWDKLSQIGSPFVQTFAKIGITAAASIINFVVITASLSGTNSGIYSASRMTYTLAESHQLPRKMTLLN
RHGVPFYSVIAIATGILIGVVLNVVLPMFFKDASEIFVMVYSSSVLPGMVPWFVILVSQIAFRKQNAAKMANHPFKMPLS
PYSNYLTLAFLALTLVFMFINPETRYSILVGVVFLVIMTLIYFRKYAGNKEETL

Specific function: Probable amino-acid or metabolite transport protein [H]

COG id: COG1113

COG function: function code E; Gamma-aminobutyrate permease and related permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Escherichia coli, GI48994972, Length=442, Percent_Identity=57.0135746606335, Blast_Score=504, Evalue=1e-144,
Organism=Escherichia coli, GI1786602, Length=452, Percent_Identity=43.8053097345133, Blast_Score=340, Evalue=2e-94,
Organism=Escherichia coli, GI1786789, Length=442, Percent_Identity=38.9140271493213, Blast_Score=318, Evalue=5e-88,
Organism=Escherichia coli, GI1790653, Length=431, Percent_Identity=37.8190255220418, Blast_Score=308, Evalue=6e-85,
Organism=Escherichia coli, GI1786302, Length=450, Percent_Identity=36.4444444444444, Blast_Score=304, Evalue=7e-84,
Organism=Escherichia coli, GI87081708, Length=459, Percent_Identity=33.1154684095861, Blast_Score=244, Evalue=9e-66,
Organism=Escherichia coli, GI87081915, Length=431, Percent_Identity=33.8747099767981, Blast_Score=243, Evalue=1e-65,
Organism=Escherichia coli, GI1788480, Length=419, Percent_Identity=36.2768496420048, Blast_Score=231, Evalue=6e-62,
Organism=Escherichia coli, GI1789017, Length=427, Percent_Identity=32.3185011709602, Blast_Score=214, Evalue=9e-57,
Organism=Escherichia coli, GI87081869, Length=266, Percent_Identity=21.0526315789474, Blast_Score=64, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6324061, Length=442, Percent_Identity=32.1266968325792, Blast_Score=189, Evalue=1e-48,
Organism=Saccharomyces cerevisiae, GI6324924, Length=441, Percent_Identity=29.9319727891156, Blast_Score=168, Evalue=2e-42,
Organism=Saccharomyces cerevisiae, GI6320772, Length=440, Percent_Identity=30.2272727272727, Blast_Score=166, Evalue=5e-42,
Organism=Saccharomyces cerevisiae, GI6322892, Length=439, Percent_Identity=30.5239179954442, Blast_Score=164, Evalue=2e-41,
Organism=Saccharomyces cerevisiae, GI6324059, Length=441, Percent_Identity=30.6122448979592, Blast_Score=152, Evalue=1e-37,
Organism=Saccharomyces cerevisiae, GI6324990, Length=442, Percent_Identity=29.4117647058824, Blast_Score=152, Evalue=1e-37,
Organism=Saccharomyces cerevisiae, GI6319824, Length=399, Percent_Identity=26.8170426065163, Blast_Score=133, Evalue=7e-32,
Organism=Saccharomyces cerevisiae, GI6321629, Length=402, Percent_Identity=26.6169154228856, Blast_Score=129, Evalue=9e-31,
Organism=Saccharomyces cerevisiae, GI6324553, Length=390, Percent_Identity=27.9487179487179, Blast_Score=121, Evalue=2e-28,
Organism=Saccharomyces cerevisiae, GI6321053, Length=457, Percent_Identity=23.8512035010941, Blast_Score=121, Evalue=2e-28,
Organism=Saccharomyces cerevisiae, GI6322967, Length=402, Percent_Identity=27.1144278606965, Blast_Score=120, Evalue=4e-28,
Organism=Saccharomyces cerevisiae, GI6319543, Length=401, Percent_Identity=25.6857855361596, Blast_Score=119, Evalue=1e-27,
Organism=Saccharomyces cerevisiae, GI6320251, Length=399, Percent_Identity=27.0676691729323, Blast_Score=118, Evalue=2e-27,
Organism=Saccharomyces cerevisiae, GI6320717, Length=401, Percent_Identity=24.4389027431421, Blast_Score=118, Evalue=2e-27,
Organism=Saccharomyces cerevisiae, GI6319542, Length=400, Percent_Identity=25.75, Blast_Score=117, Evalue=4e-27,
Organism=Saccharomyces cerevisiae, GI6319608, Length=357, Percent_Identity=25.7703081232493, Blast_Score=112, Evalue=2e-25,
Organism=Saccharomyces cerevisiae, GI6324981, Length=395, Percent_Identity=29.1139240506329, Blast_Score=111, Evalue=3e-25,
Organism=Saccharomyces cerevisiae, GI6320364, Length=501, Percent_Identity=23.1536926147705, Blast_Score=82, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293
- InterPro:   IPR004840 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 49617; Mature: 49617

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: PS00579 RIBOSOMAL_L29 ; PS00218 AMINO_ACID_PERMEASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRKLSTGQMQMIALGGTIGVGLFMGSSSTIKWTGPSVLIAYIVSGAFLYLIMRALGEML
CCCCCCCCCEEEEEECCHHHHHEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCEE
YVDPNTGSFAKFASEYIHPVFGYLTAWSNIFQFVVVGMSEMIALGGYCRYWWPNLPDWIP
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
GLIAIVFLCAANLISVKMFGTLETWFSLIKVVTIILMIIAGLGLIIFGIGNGGHPIGISN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCHH
LWTHGGFFTGGVKGFVFALAIVLASYQGIELIGVTAGEAENPQSTIVKAIRSTVARILIF
HHHCCCEECCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
YVGAIFVIVSIYPWDKLSQIGSPFVQTFAKIGITAAASIINFVVITASLSGTNSGIYSAS
HHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEHH
RMTYTLAESHQLPRKMTLLNRHGVPFYSVIAIATGILIGVVLNVVLPMFFKDASEIFVMV
HHEEEHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEE
YSSSVLPGMVPWFVILVSQIAFRKQNAAKMANHPFKMPLSPYSNYLTLAFLALTLVFMFI
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
NPETRYSILVGVVFLVIMTLIYFRKYAGNKEETL
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MQRKLSTGQMQMIALGGTIGVGLFMGSSSTIKWTGPSVLIAYIVSGAFLYLIMRALGEML
CCCCCCCCCEEEEEECCHHHHHEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCEE
YVDPNTGSFAKFASEYIHPVFGYLTAWSNIFQFVVVGMSEMIALGGYCRYWWPNLPDWIP
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
GLIAIVFLCAANLISVKMFGTLETWFSLIKVVTIILMIIAGLGLIIFGIGNGGHPIGISN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCHH
LWTHGGFFTGGVKGFVFALAIVLASYQGIELIGVTAGEAENPQSTIVKAIRSTVARILIF
HHHCCCEECCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
YVGAIFVIVSIYPWDKLSQIGSPFVQTFAKIGITAAASIINFVVITASLSGTNSGIYSAS
HHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEHH
RMTYTLAESHQLPRKMTLLNRHGVPFYSVIAIATGILIGVVLNVVLPMFFKDASEIFVMV
HHEEEHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEE
YSSSVLPGMVPWFVILVSQIAFRKQNAAKMANHPFKMPLSPYSNYLTLAFLALTLVFMFI
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
NPETRYSILVGVVFLVIMTLIYFRKYAGNKEETL
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377; 9016963 [H]