Click here to switch to the map view.

The map label for this gene is 28377067

Identifier: 28377067

GI number: 28377067

Start: 103981

End: 105573

Strand: Direct

Name: 28377067

Synonym: lp_0118

Alternate gene names: NA

Gene position: 103981-105573 (Clockwise)

Preceding gene: 28377066

Following gene: 28377069

Centisome position: 3.14

GC content: 49.22

Gene sequence:

>1593_bases
ATGGAACGAATTGAAGCTGGCATGAGCGTAATGACGTTGAAGAAGCAGACCTATCGGGTTATCGCTGTGATTAATCAGGG
GCAAGAACTGTTAGTTCGCGCCCACGAACCAGAAACAGCTGACATTGAAATAATTCCAGTGACCACAGTTGTTCAAGTAA
CTGAACAAAATTCAACAGGCGATGCAGCCGTCGCATTGGATACAGTCACGGTCGTTGGCGAACGGTATGTCGATGATATT
GTGGCAACGTTAACGACGCTCAGAGTGGGTATGGCGGTGTTGCTCCAGCGAGAAAGTGGCAATCAATACGATGATAATGC
CATCTCAGTGTGGACGTTGCAACATGCTAAGTTAGGCTACATTGCCCGGTATCAGAACCAGCCGTACGCGACACTGATGG
ATCAGGGGCAACGATTGTATGGCATCGTGACGGTATTGGATCAGCAAAAACAGCATCTTGAATTGATGCTATGGCGGACT
ACTGCAGTCCCAAGTCCGATTGAGGCGTTGCAAATCCGCCAACGATTGGCTAAGCCGAGGACAAATTTAGGGGCGGTGCC
AACGCATTCGTTACAGACACCGTTAGGAACAATTGTCATGATGTGCAATGGTCACCCGATTAAGTATCAGCAGGTTCCGT
TATCGCCATGGTTGACGCCCGCTGATGAATTACACGTCACCAAACGTTATCTATTAACGCCTGATTGGTCACAAGTGCCG
CCGGACAGCCTCATTACTTGTCAAGTGACGGCGAAGGCCGACGTGGTTCAGCGGTGGCAAAATGAACACATTTCAGCAGC
GGTCTTAACGAACGCTAGTAGCTTTTATGTGGTTGGTATCAGTGCTCAAACCAAGACGGGGCTGAATGATAACTTGGTCG
ATGATGCTGCGCAACCCGCGGTTATTTACCGAGTTGGCCAGGTTAGTGCACATATGCAGGCCGGCTTCATGGTCAGCTGG
GCGCCGTTTGGTGATCCGCGCGTACAACCAGCACTGAAATTAGCATTGCACTTCTCCTCACAACCGCTAGTTCCTTACCA
TCCAGTAACACCTAGTCGCACCAACGCGACGTTTACGCAGCAAGAGTTGGCAGCCTTGTTAGTCTCCGCATTACCAAATT
ATCAGGGTGGTCAACGCCTAGAACCAAGTGTGACAACGATAACGGTAGAAAAATTGCGGCAGACGTTAGGTGATCAGACG
TATCATGCGCTGGCGAATTATCAGCGTCATGTTCAGCTAGTTGCGGGTAGTACGGAAGGTGTCAACGAGACCTTGTTACA
GGCGTTGATTCATGCAGTCACGTATCATGAGTTGACGACCATGCACTACTACCAGCCGACTGTAGGGATGGTCGACCAGG
TTATTTATCCGATTCAATTATTTAGCACCACGACTAAGGATGAGGATGATGCGCAATTAGTGGGTTGCTTAGCGCTTTAC
AATTACGAAACGTTTGAAATCCAACAGGTGCCGCTGACGGCAATTGCTCGTATCGCAATTATTGCCGATCCGGAGCATCC
CCAGACAACACCGGAGACGGAAAGTCCGGATTGGTTACGCATATTTTTACATGGGTGGAATGACGATTTTTGA

Upstream 100 bases:

>100_bases
AAGATATTGTAAGCTGACGTGTAAAACAATTCGTAAAGCTGTTAATACTGGCAACGCTTTCGTATAATGGAATAAAGTTA
TTGTTAAGGGGGTGACCGCT

Downstream 100 bases:

>100_bases
ACGAACAGTCAAAAATTAATTTGCTTACGACTTATAAGTATTCGTGATACAAGCCAGATTGAATTCGATAAAAAATCCCG
CTGAGGCTTTAAACTCAGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 530; Mature: 530

Protein sequence:

>530_residues
MERIEAGMSVMTLKKQTYRVIAVINQGQELLVRAHEPETADIEIIPVTTVVQVTEQNSTGDAAVALDTVTVVGERYVDDI
VATLTTLRVGMAVLLQRESGNQYDDNAISVWTLQHAKLGYIARYQNQPYATLMDQGQRLYGIVTVLDQQKQHLELMLWRT
TAVPSPIEALQIRQRLAKPRTNLGAVPTHSLQTPLGTIVMMCNGHPIKYQQVPLSPWLTPADELHVTKRYLLTPDWSQVP
PDSLITCQVTAKADVVQRWQNEHISAAVLTNASSFYVVGISAQTKTGLNDNLVDDAAQPAVIYRVGQVSAHMQAGFMVSW
APFGDPRVQPALKLALHFSSQPLVPYHPVTPSRTNATFTQQELAALLVSALPNYQGGQRLEPSVTTITVEKLRQTLGDQT
YHALANYQRHVQLVAGSTEGVNETLLQALIHAVTYHELTTMHYYQPTVGMVDQVIYPIQLFSTTTKDEDDAQLVGCLALY
NYETFEIQQVPLTAIARIAIIADPEHPQTTPETESPDWLRIFLHGWNDDF

Sequences:

>Translated_530_residues
MERIEAGMSVMTLKKQTYRVIAVINQGQELLVRAHEPETADIEIIPVTTVVQVTEQNSTGDAAVALDTVTVVGERYVDDI
VATLTTLRVGMAVLLQRESGNQYDDNAISVWTLQHAKLGYIARYQNQPYATLMDQGQRLYGIVTVLDQQKQHLELMLWRT
TAVPSPIEALQIRQRLAKPRTNLGAVPTHSLQTPLGTIVMMCNGHPIKYQQVPLSPWLTPADELHVTKRYLLTPDWSQVP
PDSLITCQVTAKADVVQRWQNEHISAAVLTNASSFYVVGISAQTKTGLNDNLVDDAAQPAVIYRVGQVSAHMQAGFMVSW
APFGDPRVQPALKLALHFSSQPLVPYHPVTPSRTNATFTQQELAALLVSALPNYQGGQRLEPSVTTITVEKLRQTLGDQT
YHALANYQRHVQLVAGSTEGVNETLLQALIHAVTYHELTTMHYYQPTVGMVDQVIYPIQLFSTTTKDEDDAQLVGCLALY
NYETFEIQQVPLTAIARIAIIADPEHPQTTPETESPDWLRIFLHGWNDDF
>Mature_530_residues
MERIEAGMSVMTLKKQTYRVIAVINQGQELLVRAHEPETADIEIIPVTTVVQVTEQNSTGDAAVALDTVTVVGERYVDDI
VATLTTLRVGMAVLLQRESGNQYDDNAISVWTLQHAKLGYIARYQNQPYATLMDQGQRLYGIVTVLDQQKQHLELMLWRT
TAVPSPIEALQIRQRLAKPRTNLGAVPTHSLQTPLGTIVMMCNGHPIKYQQVPLSPWLTPADELHVTKRYLLTPDWSQVP
PDSLITCQVTAKADVVQRWQNEHISAAVLTNASSFYVVGISAQTKTGLNDNLVDDAAQPAVIYRVGQVSAHMQAGFMVSW
APFGDPRVQPALKLALHFSSQPLVPYHPVTPSRTNATFTQQELAALLVSALPNYQGGQRLEPSVTTITVEKLRQTLGDQT
YHALANYQRHVQLVAGSTEGVNETLLQALIHAVTYHELTTMHYYQPTVGMVDQVIYPIQLFSTTTKDEDDAQLVGCLALY
NYETFEIQQVPLTAIARIAIIADPEHPQTTPETESPDWLRIFLHGWNDDF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58973; Mature: 58973

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERIEAGMSVMTLKKQTYRVIAVINQGQELLVRAHEPETADIEIIPVTTVVQVTEQNSTG
CCHHHHCCEEEEEHHCCEEEEEEEECCCEEEEEECCCCCCCEEEEEEEEEEEEECCCCCC
DAAVALDTVTVVGERYVDDIVATLTTLRVGMAVLLQRESGNQYDDNAISVWTLQHAKLGY
CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCEEEEEEECCCCCE
IARYQNQPYATLMDQGQRLYGIVTVLDQQKQHLELMLWRTTAVPSPIEALQIRQRLAKPR
EEEECCCCHHHHHHCCCEEEEEHHHHHCHHHCEEEEEEEECCCCCHHHHHHHHHHHCCCC
TNLGAVPTHSLQTPLGTIVMMCNGHPIKYQQVPLSPWLTPADELHVTKRYLLTPDWSQVP
CCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCHHHHEEEEEEEECCCCCCCC
PDSLITCQVTAKADVVQRWQNEHISAAVLTNASSFYVVGISAQTKTGLNDNLVDDAAQPA
CCCEEEEEEECHHHHHHHHHCCCCEEEEEECCCEEEEEEEECCCCCCCCCCCHHCCCCCE
VIYRVGQVSAHMQAGFMVSWAPFGDPRVQPALKLALHFSSQPLVPYHPVTPSRTNATFTQ
EEEEECCHHHHHCCCEEEEECCCCCCCCCHHHEEEEEECCCCCCCCCCCCCCCCCCCCCH
QELAALLVSALPNYQGGQRLEPSVTTITVEKLRQTLGDQTYHALANYQRHVQLVAGSTEG
HHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHCCHHHHHHHHHHHEEEEEECCCCC
VNETLLQALIHAVTYHELTTMHYYQPTVGMVDQVIYPIQLFSTTTKDEDDAQLVGCLALY
HHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHEEEECCCCCCCCHHHEEEHHHC
NYETFEIQQVPLTAIARIAIIADPEHPQTTPETESPDWLRIFLHGWNDDF
CCCEEEEEECCHHHEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCC
>Mature Secondary Structure
MERIEAGMSVMTLKKQTYRVIAVINQGQELLVRAHEPETADIEIIPVTTVVQVTEQNSTG
CCHHHHCCEEEEEHHCCEEEEEEEECCCEEEEEECCCCCCCEEEEEEEEEEEEECCCCCC
DAAVALDTVTVVGERYVDDIVATLTTLRVGMAVLLQRESGNQYDDNAISVWTLQHAKLGY
CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCEEEEEEECCCCCE
IARYQNQPYATLMDQGQRLYGIVTVLDQQKQHLELMLWRTTAVPSPIEALQIRQRLAKPR
EEEECCCCHHHHHHCCCEEEEEHHHHHCHHHCEEEEEEEECCCCCHHHHHHHHHHHCCCC
TNLGAVPTHSLQTPLGTIVMMCNGHPIKYQQVPLSPWLTPADELHVTKRYLLTPDWSQVP
CCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCHHHHEEEEEEEECCCCCCCC
PDSLITCQVTAKADVVQRWQNEHISAAVLTNASSFYVVGISAQTKTGLNDNLVDDAAQPA
CCCEEEEEEECHHHHHHHHHCCCCEEEEEECCCEEEEEEEECCCCCCCCCCCHHCCCCCE
VIYRVGQVSAHMQAGFMVSWAPFGDPRVQPALKLALHFSSQPLVPYHPVTPSRTNATFTQ
EEEEECCHHHHHCCCEEEEECCCCCCCCCHHHEEEEEECCCCCCCCCCCCCCCCCCCCCH
QELAALLVSALPNYQGGQRLEPSVTTITVEKLRQTLGDQTYHALANYQRHVQLVAGSTEG
HHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHCCHHHHHHHHHHHEEEEEECCCCC
VNETLLQALIHAVTYHELTTMHYYQPTVGMVDQVIYPIQLFSTTTKDEDDAQLVGCLALY
HHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHEEEECCCCCCCCHHHEEEHHHC
NYETFEIQQVPLTAIARIAIIADPEHPQTTPETESPDWLRIFLHGWNDDF
CCCEEEEEECCHHHEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA