| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is arsR [C]
Identifier: 28377044
GI number: 28377044
Start: 79467
End: 79775
Strand: Direct
Name: arsR [C]
Synonym: lp_0083
Alternate gene names: 28377044
Gene position: 79467-79775 (Clockwise)
Preceding gene: 28377041
Following gene: 28377046
Centisome position: 2.4
GC content: 44.66
Gene sequence:
>309_bases ATGGCAATATTTAAGAAGGGTGTTCCGATTTTTACAATTCTTCAAGACGAAAATCGGCAACGGATTTTGGTGATGCTGTG CCGGACTGATCAGATGACGGTTAACCAAATTACAGCGCAAATCGCCTTATCACGACCGGCCGTATCGCACCATTTGAAGT TGATGCTGGATGCCGGCATTTTAGCGGTTAGCAAAACAGGTACTGAACGTTATTACCGCGCTAACATGACGGCGACTCTA AAATTATTGAAGGCACTCACTGCGTCATTAGAAGCCGATTTAGCCCATACTCAGTCTGTAGACGAATAA
Upstream 100 bases:
>100_bases AGTCAACGATTAATTCTTGACTTTCAATTTTAGCAAGCGTTAAATGGTTTAAGAATACGAACCGTAATTGGAAAGGTGTG ATTTTTTGGCAGAACGAACG
Downstream 100 bases:
>100_bases AAAAATGAATCAGAGTGAAAAAAGCTGGTACTTTTGGAATGACGCCTCTCATTCCAAAAGTACCAGCTTTTAGTTCACTT ATGCAGTTCAGCGCACTGAA
Product: transcription regulator
Products: NA
Alternate protein names: Transcriptional Regulator ArsR Family; Transcriptional Regulator ArsR Family Protein; Transcription Regulator; Transcriptional Regulator; Glutamine ABC Transporter; Transcriptional Repressor
Number of amino acids: Translated: 102; Mature: 101
Protein sequence:
>102_residues MAIFKKGVPIFTILQDENRQRILVMLCRTDQMTVNQITAQIALSRPAVSHHLKLMLDAGILAVSKTGTERYYRANMTATL KLLKALTASLEADLAHTQSVDE
Sequences:
>Translated_102_residues MAIFKKGVPIFTILQDENRQRILVMLCRTDQMTVNQITAQIALSRPAVSHHLKLMLDAGILAVSKTGTERYYRANMTATL KLLKALTASLEADLAHTQSVDE >Mature_101_residues AIFKKGVPIFTILQDENRQRILVMLCRTDQMTVNQITAQIALSRPAVSHHLKLMLDAGILAVSKTGTERYYRANMTATLK LLKALTASLEADLAHTQSVDE
Specific function: Transcriptional Repressor For The Arsefg Operon. Arse Is A Trans-Acting Regulatory Protein Which Controls Its Own Expression. The Repressive Effect Of Arse Is Alleviated By Oxyions Of +III Oxidation State Of Arsenic, Antimony, And Bismuth, As Well As Arse
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11355; Mature: 11223
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: PS50987 HTH_ARSR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIFKKGVPIFTILQDENRQRILVMLCRTDQMTVNQITAQIALSRPAVSHHLKLMLDAGI CCCCCCCCCEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHEECCCE LAVSKTGTERYYRANMTATLKLLKALTASLEADLAHTQSVDE EEEECCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AIFKKGVPIFTILQDENRQRILVMLCRTDQMTVNQITAQIALSRPAVSHHLKLMLDAGI CCCCCCCCEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHEECCCE LAVSKTGTERYYRANMTATLKLLKALTASLEADLAHTQSVDE EEEECCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA