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The map label for this gene is 28377026

Identifier: 28377026

GI number: 28377026

Start: 62200

End: 63735

Strand: Direct

Name: 28377026

Synonym: lp_0063

Alternate gene names: NA

Gene position: 62200-63735 (Clockwise)

Preceding gene: 28377025

Following gene: 28377028

Centisome position: 1.88

GC content: 45.96

Gene sequence:

>1536_bases
ATGCAATTAAAGCCGTTATTGCGGCAGTTAGCCACAACGTTTGAGGTGACTGTCGATCCAACATTTACACATAATCCCGA
AGTTACTCACGTCCAATTTGTTGATCCGACGGAAGCGTTAGCAAGCCACCGGTTATATTTGTCCCCCGACTCGAGTCAGC
TAGTTCAACTTACTTATAGTTGGCACGGCCATCGTCAGTCGGTCGGACTAGTAAATCTGGGAACCGGTCTGACTACAATC
ATTGCGGCGCAAAATCAGTTATTGAAATTATTAATGACGCTTGGTCAGTGTTTACACCACGATGTTCAAATTCAAGCAGC
CATCAATCAGCTCGCTATCCAAGCAATCACGGCGGATTTTGATACCACACTGGCCCAAGCAGTACGCTTATTAGAGAATC
CGCTGGCGATTATTGATCTGAACGGGGAAATTCTGACACGGTCGCATACGACGCAACTCAATGGGACTAGTATTCACGCC
GCAGTTGAGACGAATCGAGTCGGACGCTGGCTGTTAGACCACGGATTTGCACCGGATACGCCGGATTTTTTAACGCAAGT
CTATGTGGCGGAAGATCAGTTGTCGGCGGGGCCCATGCTAATTACGCCGTTAGCAAATGGCACCGAGCCGCTCGGTTATT
TGGTGATGCCAGCACTCAATAAACCACTGAATGATCGACAAGCACTACTGATCAATTCGATTGGTCAGGTTATCGCTGGC
TCGTTAGTTAAAAATCAGATTATGCCAACAGCCGAATCGCAACGGGACCGGTTATTAAACTTATTATTGACGGAACATCA
AGGGGGAACGTTTGCTGATCAGTTTGCTGAACAACACGTGCAATTACCGACAGCCATGGTGTTAATCCGCTGCGAACCAC
TAGCTGATCAAGCACCGATGATTTTACAGCAGCGACTACAGTACTTGATGATGCCACGATTCAAACAAGTGTTGGTTTCG
ACTTATCAGCAACAATGTGTGGCACTGATCCCAATTAGTCTGGTCGCATATAATCAGAATCAATTTAAACTAACGTTGCA
GCAAATTACGAAGCAAGCGGATTGCCGCTTGATCGTGTCTCAGCACTACGTTAATCCGGAAGATACCTTTGCCGCGTATA
CAGTTTGTGAACGAACGGCGCAACTGAAGACTGGCCGTGGTCGGGTGATTTTTTGTGAAGACCAATTCTATAACCTTGCG
TTGGCACGAGTTAATCACCTTGAGATCTTACCGTTCTTTATTAATCCAGCCTTACGTTTGTTGTTGGCCTATGATCAGCA
AAACCATACAGAACTGGTACCAACATTAGATGTCTACTTACGGGCGACTTGTAATTTGACCCGCACGGCTAAGCAATTAT
ACGTTCATCCAAATACACTGCGTAATCGACTGCACCATATCACAACACTGACCGGATGCGATTTACGGGATGCGGAAACG
TGCTTTAAATTGGCTGCTAGTTTTAAATTACGGCAATTTTTAACCCAGCATCAGTACCAGTATCGACCGGATATTCCAAT
TCCGACCCAAGATTAA

Upstream 100 bases:

>100_bases
CTTTCGAGGGTGGTGGGGGGTTATCAGTAGGCCTCTTTACAAAAGCGCTTACATTATTTATGATGAAGGCGACAAGCGTG
AATAAGGAGGTTACTTGAGT

Downstream 100 bases:

>100_bases
GCGGGGCATAAAAGCGTGCAACCGTTTGTGGAAAAATGGCTGGATCAGTCATTATTAGTAAATCCGTAAATTCAGGATGG
ACGGCAGTAATGGGGCCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator CdaR; Regulatory Protein; Transcriptional Regulator; Regulator Of Polyketide Synthase Expression; Polyketide Synthase Expression Regulator

Number of amino acids: Translated: 511; Mature: 511

Protein sequence:

>511_residues
MQLKPLLRQLATTFEVTVDPTFTHNPEVTHVQFVDPTEALASHRLYLSPDSSQLVQLTYSWHGHRQSVGLVNLGTGLTTI
IAAQNQLLKLLMTLGQCLHHDVQIQAAINQLAIQAITADFDTTLAQAVRLLENPLAIIDLNGEILTRSHTTQLNGTSIHA
AVETNRVGRWLLDHGFAPDTPDFLTQVYVAEDQLSAGPMLITPLANGTEPLGYLVMPALNKPLNDRQALLINSIGQVIAG
SLVKNQIMPTAESQRDRLLNLLLTEHQGGTFADQFAEQHVQLPTAMVLIRCEPLADQAPMILQQRLQYLMMPRFKQVLVS
TYQQQCVALIPISLVAYNQNQFKLTLQQITKQADCRLIVSQHYVNPEDTFAAYTVCERTAQLKTGRGRVIFCEDQFYNLA
LARVNHLEILPFFINPALRLLLAYDQQNHTELVPTLDVYLRATCNLTRTAKQLYVHPNTLRNRLHHITTLTGCDLRDAET
CFKLAASFKLRQFLTQHQYQYRPDIPIPTQD

Sequences:

>Translated_511_residues
MQLKPLLRQLATTFEVTVDPTFTHNPEVTHVQFVDPTEALASHRLYLSPDSSQLVQLTYSWHGHRQSVGLVNLGTGLTTI
IAAQNQLLKLLMTLGQCLHHDVQIQAAINQLAIQAITADFDTTLAQAVRLLENPLAIIDLNGEILTRSHTTQLNGTSIHA
AVETNRVGRWLLDHGFAPDTPDFLTQVYVAEDQLSAGPMLITPLANGTEPLGYLVMPALNKPLNDRQALLINSIGQVIAG
SLVKNQIMPTAESQRDRLLNLLLTEHQGGTFADQFAEQHVQLPTAMVLIRCEPLADQAPMILQQRLQYLMMPRFKQVLVS
TYQQQCVALIPISLVAYNQNQFKLTLQQITKQADCRLIVSQHYVNPEDTFAAYTVCERTAQLKTGRGRVIFCEDQFYNLA
LARVNHLEILPFFINPALRLLLAYDQQNHTELVPTLDVYLRATCNLTRTAKQLYVHPNTLRNRLHHITTLTGCDLRDAET
CFKLAASFKLRQFLTQHQYQYRPDIPIPTQD
>Mature_511_residues
MQLKPLLRQLATTFEVTVDPTFTHNPEVTHVQFVDPTEALASHRLYLSPDSSQLVQLTYSWHGHRQSVGLVNLGTGLTTI
IAAQNQLLKLLMTLGQCLHHDVQIQAAINQLAIQAITADFDTTLAQAVRLLENPLAIIDLNGEILTRSHTTQLNGTSIHA
AVETNRVGRWLLDHGFAPDTPDFLTQVYVAEDQLSAGPMLITPLANGTEPLGYLVMPALNKPLNDRQALLINSIGQVIAG
SLVKNQIMPTAESQRDRLLNLLLTEHQGGTFADQFAEQHVQLPTAMVLIRCEPLADQAPMILQQRLQYLMMPRFKQVLVS
TYQQQCVALIPISLVAYNQNQFKLTLQQITKQADCRLIVSQHYVNPEDTFAAYTVCERTAQLKTGRGRVIFCEDQFYNLA
LARVNHLEILPFFINPALRLLLAYDQQNHTELVPTLDVYLRATCNLTRTAKQLYVHPNTLRNRLHHITTLTGCDLRDAET
CFKLAASFKLRQFLTQHQYQYRPDIPIPTQD

Specific function: Unknown

COG id: COG2508

COG function: function code TQ; Regulator of polyketide synthase expression

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57526; Mature: 57526

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLKPLLRQLATTFEVTVDPTFTHNPEVTHVQFVDPTEALASHRLYLSPDSSQLVQLTYS
CCHHHHHHHHHHHEEEEECCCCCCCCCEEEEEEECHHHHHHCCEEEECCCCCCEEEEEEE
WHGHRQSVGLVNLGTGLTTIIAAQNQLLKLLMTLGQCLHHDVQIQAAINQLAIQAITADF
ECCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCH
DTTLAQAVRLLENPLAIIDLNGEILTRSHTTQLNGTSIHAAVETNRVGRWLLDHGFAPDT
HHHHHHHHHHHCCCEEEEECCCCEEECCCCCCCCCCEEEEEEECCCCHHHHHHCCCCCCC
PDFLTQVYVAEDQLSAGPMLITPLANGTEPLGYLVMPALNKPLNDRQALLINSIGQVIAG
HHHHHEEEEECCCCCCCCEEEEECCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHH
SLVKNQIMPTAESQRDRLLNLLLTEHQGGTFADQFAEQHVQLPTAMVLIRCEPLADQAPM
HHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCHH
ILQQRLQYLMMPRFKQVLVSTYQQQCVALIPISLVAYNQNQFKLTLQQITKQADCRLIVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCEEEEHHHHCCCCCCEEEEH
QHYVNPEDTFAAYTVCERTAQLKTGRGRVIFCEDQFYNLALARVNHLEILPFFINPALRL
HHCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHEECCCEEEHHHHCHHHHH
LLAYDQQNHTELVPTLDVYLRATCNLTRTAKQLYVHPNTLRNRLHHITTLTGCDLRDAET
HHHCCCCCCCCCCCHHEEHHHHHCCHHHHHHHEEECCHHHHHHHHHHHEECCCCCCCHHH
CFKLAASFKLRQFLTQHQYQYRPDIPIPTQD
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQLKPLLRQLATTFEVTVDPTFTHNPEVTHVQFVDPTEALASHRLYLSPDSSQLVQLTYS
CCHHHHHHHHHHHEEEEECCCCCCCCCEEEEEEECHHHHHHCCEEEECCCCCCEEEEEEE
WHGHRQSVGLVNLGTGLTTIIAAQNQLLKLLMTLGQCLHHDVQIQAAINQLAIQAITADF
ECCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCH
DTTLAQAVRLLENPLAIIDLNGEILTRSHTTQLNGTSIHAAVETNRVGRWLLDHGFAPDT
HHHHHHHHHHHCCCEEEEECCCCEEECCCCCCCCCCEEEEEEECCCCHHHHHHCCCCCCC
PDFLTQVYVAEDQLSAGPMLITPLANGTEPLGYLVMPALNKPLNDRQALLINSIGQVIAG
HHHHHEEEEECCCCCCCCEEEEECCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHH
SLVKNQIMPTAESQRDRLLNLLLTEHQGGTFADQFAEQHVQLPTAMVLIRCEPLADQAPM
HHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCHH
ILQQRLQYLMMPRFKQVLVSTYQQQCVALIPISLVAYNQNQFKLTLQQITKQADCRLIVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCEEEEHHHHCCCCCCEEEEH
QHYVNPEDTFAAYTVCERTAQLKTGRGRVIFCEDQFYNLALARVNHLEILPFFINPALRL
HHCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHEECCCEEEHHHHCHHHHH
LLAYDQQNHTELVPTLDVYLRATCNLTRTAKQLYVHPNTLRNRLHHITTLTGCDLRDAET
HHHCCCCCCCCCCCHHEEHHHHHCCHHHHHHHEEECCHHHHHHHHHHHEECCCCCCCHHH
CFKLAASFKLRQFLTQHQYQYRPDIPIPTQD
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA