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The map label for this gene is yycJ [H]

Identifier: 28377008

GI number: 28377008

Start: 42895

End: 43710

Strand: Direct

Name: yycJ [H]

Synonym: lp_0041

Alternate gene names: 28377008

Gene position: 42895-43710 (Clockwise)

Preceding gene: 28377007

Following gene: 28377009

Centisome position: 1.3

GC content: 44.12

Gene sequence:

>816_bases
ATGGTATTAAAATTAGCAACGGATGATATGAAAGTAAGCATTCTGGCATCGGGTAGTACGGGTAACGTGACGTACATCGA
AACGCCAGAGCACAAAGTATTGGTTGATGCGGGGCTAAGTGGCAAAAAAATTGCTAATTTAATGGCGTCGATCGATCGTG
ATATTAATGAAGTCGATAGTTTATTTATTAGTCATGAACACACTGATCACTGTCATTCTGCGGGGATTTTAGCGCGGAAG
TATGGCATGGATGTTTATGCTAATCAGGGGACCTGGGACGCAATGGCGCATAAAATCGGCAACGTTCCTGCCGAATTATG
TCATGTCTTTGACCCGAACACGACGCTCGGACTAGGTGATCTCGACGTGGAATCATTTAGTGTGTCACATGATGCGGCCG
AGCCACAATTTTATGAACTACATCATGCCGGAAAATCGTTTGTCATCATTACGGATACGGGCTACGTTTCAGAGCACGTT
GAAGGTGTAATCAAAGACGCTGACGGCTATTTATTTGAATGTAATCATGACTTAGAAATGTTGCGGATGGGTCGGTATCC
ATGGCCATTAAAGCAGCGAATTATTGGTGATGAGGGCCATTTATCGAATGAAGATGGTGCGAACGCCTTGATGGATGTGA
TTGGCCGGCATACCAAGCGGATTTACTTAGGGCATCGTAGTCAAGATAATAACTTGAAGTCCTTGGCGCATTTAACGGTT
GCTTCCATGATGACGGAACGAGATTTTGGCGTTGAGCATGATTTTCAATTGTACGATACGGAGCCAGAACAAGCGACTAA
GTTAATCACGTTATAG

Upstream 100 bases:

>100_bases
TAAGTTTGAGCACTTGCAGGTGGCTTGCTTTTCAACCCTGCTAAAAGCGTGTATCATATGAAGATAGTAATGGATTTCAG
AGATAGGAAGAGCCTAAATA

Downstream 100 bases:

>100_bases
GTTAGCTTTAATGTTTCACAACGCTTCAGTCATAAAAAAATCACACTTTTTCGCTAAAATAAACTTAAAATAAGCATTAG
TAGGGAGGGATCGCGTTTCG

Product: hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MVLKLATDDMKVSILASGSTGNVTYIETPEHKVLVDAGLSGKKIANLMASIDRDINEVDSLFISHEHTDHCHSAGILARK
YGMDVYANQGTWDAMAHKIGNVPAELCHVFDPNTTLGLGDLDVESFSVSHDAAEPQFYELHHAGKSFVIITDTGYVSEHV
EGVIKDADGYLFECNHDLEMLRMGRYPWPLKQRIIGDEGHLSNEDGANALMDVIGRHTKRIYLGHRSQDNNLKSLAHLTV
ASMMTERDFGVEHDFQLYDTEPEQATKLITL

Sequences:

>Translated_271_residues
MVLKLATDDMKVSILASGSTGNVTYIETPEHKVLVDAGLSGKKIANLMASIDRDINEVDSLFISHEHTDHCHSAGILARK
YGMDVYANQGTWDAMAHKIGNVPAELCHVFDPNTTLGLGDLDVESFSVSHDAAEPQFYELHHAGKSFVIITDTGYVSEHV
EGVIKDADGYLFECNHDLEMLRMGRYPWPLKQRIIGDEGHLSNEDGANALMDVIGRHTKRIYLGHRSQDNNLKSLAHLTV
ASMMTERDFGVEHDFQLYDTEPEQATKLITL
>Mature_271_residues
MVLKLATDDMKVSILASGSTGNVTYIETPEHKVLVDAGLSGKKIANLMASIDRDINEVDSLFISHEHTDHCHSAGILARK
YGMDVYANQGTWDAMAHKIGNVPAELCHVFDPNTTLGLGDLDVESFSVSHDAAEPQFYELHHAGKSFVIITDTGYVSEHV
EGVIKDADGYLFECNHDLEMLRMGRYPWPLKQRIIGDEGHLSNEDGANALMDVIGRHTKRIYLGHRSQDNNLKSLAHLTV
ASMMTERDFGVEHDFQLYDTEPEQATKLITL

Specific function: Unknown

COG id: COG1235

COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily I

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 30106; Mature: 30106

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLKLATDDMKVSILASGSTGNVTYIETPEHKVLVDAGLSGKKIANLMASIDRDINEVDS
CEEEEECCCEEEEEEEECCCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHCCHHHHHH
LFISHEHTDHCHSAGILARKYGMDVYANQGTWDAMAHKIGNVPAELCHVFDPNTTLGLGD
HHHCCCCCCHHHHHCHHHHHHCCEEEECCCCHHHHHHHHCCCCHHHHEEECCCCEEECCC
LDVESFSVSHDAAEPQFYELHHAGKSFVIITDTGYVSEHVEGVIKDADGYLFECNHDLEM
CCCCCEECCCCCCCCCEEEHHHCCCEEEEEECCCHHHHHHHHHHCCCCCEEEEECCCHHH
LRMGRYPWPLKQRIIGDEGHLSNEDGANALMDVIGRHTKRIYLGHRSQDNNLKSLAHLTV
HHCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHH
ASMMTERDFGVEHDFQLYDTEPEQATKLITL
HHHHHHHCCCCCCCCEEEECCHHHHHEEECC
>Mature Secondary Structure
MVLKLATDDMKVSILASGSTGNVTYIETPEHKVLVDAGLSGKKIANLMASIDRDINEVDS
CEEEEECCCEEEEEEEECCCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHHCCHHHHHH
LFISHEHTDHCHSAGILARKYGMDVYANQGTWDAMAHKIGNVPAELCHVFDPNTTLGLGD
HHHCCCCCCHHHHHCHHHHHHCCEEEECCCCHHHHHHHHCCCCHHHHEEECCCCEEECCC
LDVESFSVSHDAAEPQFYELHHAGKSFVIITDTGYVSEHVEGVIKDADGYLFECNHDLEM
CCCCCEECCCCCCCCCEEEHHHCCCEEEEEECCCHHHHHHHHHHCCCCCEEEEECCCHHH
LRMGRYPWPLKQRIIGDEGHLSNEDGANALMDVIGRHTKRIYLGHRSQDNNLKSLAHLTV
HHCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHH
ASMMTERDFGVEHDFQLYDTEPEQATKLITL
HHHHHHHCCCCCCCCEEEECCHHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]