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The map label for this gene is yycI [H]

Identifier: 28377007

GI number: 28377007

Start: 41683

End: 42537

Strand: Direct

Name: yycI [H]

Synonym: lp_0039

Alternate gene names: 28377007

Gene position: 41683-42537 (Clockwise)

Preceding gene: 28377006

Following gene: 28377008

Centisome position: 1.26

GC content: 45.03

Gene sequence:

>855_bases
ATGAATTTTCGGAGAATTGAGTGGATTTTCCTACTAGCATTTGTTGTTCTAGATATCTTCTTGGGTTTTATGTTCGTGCA
AACGAGCTCTAAGTCGACACAAACGACTGGTGATACGGCGACTACGATAATTCGTGAAATGCGCGCAGATAATATTAGCT
TTAAAAACCCGGACACGAGCGAAGGGACGGGTTACTATATTGCGGGCAGTAACGAGAGTGGTCTCAAACAATTGTTGAGT
CAGTTAACTGAACAGACAGCCCGGGTGCAAAGTGGCGGTAAGCTCGTGAGCACACTACGGGCAACCACCACTATCGATAC
CCGCAATCCTAAAGCGGACTTGACGACGTTTATGAGTCAGCGGACCAATGTAATCCATGGAACCGAGTACGTCTATGATG
CGGATTTGTCGTCTAACGGCGATTACGTTTTTGTTCAAAAGGTTGCGGATGGCGAGATCATGACTGGCGCTGGGCAAGTC
CACCTATTTGTTAATAAAAACAAGCAGCTGACAAGTTATACTCAGACGTACGTCAATCACGTCAAAACTTTACGCGAAAA
GGCTGTTACGATCAGTGAAAAAAAGGCCTTGGTTGCGTTGTATCAATATAATCAGGTGGCAAGTAGTTCCCGGATCGTTT
GGGCAAAGCTTGGGTATTCTCGGTTATTGAAATTGAAGGATAGTAGTGTTTACGTCCCAACGTGGATCTTTGCGGTCCGG
GGTAAGAATAGTTCTAACGTTACACTGCACCGTATCAATGCCTTTACTGGTTCTTCAATGAAGAACGGTAGTACGGCTAG
TGATACGAGTAGTTTAGATGCGACGGTCGGAATGATGTGGAATGCAATTGATTAG

Upstream 100 bases:

>100_bases
CCAAACTCGTGATCGACCTGACGCCGACGTATTATGTCTACTATAATGGCACTTGGCGGACATATACGTCAATGTTAAGT
GGATCTTAGGAGGTGGCCGC

Downstream 100 bases:

>100_bases
TGAAACCAATTTAACGACTAGGTGTCGTTGTCGAATAACGGGTGCTGTGAAGAAGAGTGTTTTTCCTAACAGGCCCGTTT
TTTGGTGACTAGATTTTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MNFRRIEWIFLLAFVVLDIFLGFMFVQTSSKSTQTTGDTATTIIREMRADNISFKNPDTSEGTGYYIAGSNESGLKQLLS
QLTEQTARVQSGGKLVSTLRATTTIDTRNPKADLTTFMSQRTNVIHGTEYVYDADLSSNGDYVFVQKVADGEIMTGAGQV
HLFVNKNKQLTSYTQTYVNHVKTLREKAVTISEKKALVALYQYNQVASSSRIVWAKLGYSRLLKLKDSSVYVPTWIFAVR
GKNSSNVTLHRINAFTGSSMKNGSTASDTSSLDATVGMMWNAID

Sequences:

>Translated_284_residues
MNFRRIEWIFLLAFVVLDIFLGFMFVQTSSKSTQTTGDTATTIIREMRADNISFKNPDTSEGTGYYIAGSNESGLKQLLS
QLTEQTARVQSGGKLVSTLRATTTIDTRNPKADLTTFMSQRTNVIHGTEYVYDADLSSNGDYVFVQKVADGEIMTGAGQV
HLFVNKNKQLTSYTQTYVNHVKTLREKAVTISEKKALVALYQYNQVASSSRIVWAKLGYSRLLKLKDSSVYVPTWIFAVR
GKNSSNVTLHRINAFTGSSMKNGSTASDTSSLDATVGMMWNAID
>Mature_284_residues
MNFRRIEWIFLLAFVVLDIFLGFMFVQTSSKSTQTTGDTATTIIREMRADNISFKNPDTSEGTGYYIAGSNESGLKQLLS
QLTEQTARVQSGGKLVSTLRATTTIDTRNPKADLTTFMSQRTNVIHGTEYVYDADLSSNGDYVFVQKVADGEIMTGAGQV
HLFVNKNKQLTSYTQTYVNHVKTLREKAVTISEKKALVALYQYNQVASSSRIVWAKLGYSRLLKLKDSSVYVPTWIFAVR
GKNSSNVTLHRINAFTGSSMKNGSTASDTSSLDATVGMMWNAID

Specific function: Together with yycH, regulates the activity of the two- component system yycF/yycG [H]

COG id: COG4853

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018604 [H]

Pfam domain/function: PF09648 YycI [H]

EC number: NA

Molecular weight: Translated: 31477; Mature: 31477

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFRRIEWIFLLAFVVLDIFLGFMFVQTSSKSTQTTGDTATTIIREMRADNISFKNPDTS
CCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
EGTGYYIAGSNESGLKQLLSQLTEQTARVQSGGKLVSTLRATTTIDTRNPKADLTTFMSQ
CCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEEECCCCCHHHHHHHHHH
RTNVIHGTEYVYDADLSSNGDYVFVQKVADGEIMTGAGQVHLFVNKNKQLTSYTQTYVNH
CCCEEECCCEEEECCCCCCCCEEEEEEECCCEEEECCCEEEEEEECCCCHHHHHHHHHHH
VKTLREKAVTISEKKALVALYQYNQVASSSRIVWAKLGYSRLLKLKDSSVYVPTWIFAVR
HHHHHHHHHEECCCCEEEEEEHHHHHCCCCCEEEEECCHHHHEEECCCCEEEEEEEEEEE
GKNSSNVTLHRINAFTGSSMKNGSTASDTSSLDATVGMMWNAID
CCCCCCEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHEECCC
>Mature Secondary Structure
MNFRRIEWIFLLAFVVLDIFLGFMFVQTSSKSTQTTGDTATTIIREMRADNISFKNPDTS
CCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
EGTGYYIAGSNESGLKQLLSQLTEQTARVQSGGKLVSTLRATTTIDTRNPKADLTTFMSQ
CCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEEECCCCCHHHHHHHHHH
RTNVIHGTEYVYDADLSSNGDYVFVQKVADGEIMTGAGQVHLFVNKNKQLTSYTQTYVNH
CCCEEECCCEEEECCCCCCCCEEEEEEECCCEEEECCCEEEEEEECCCCHHHHHHHHHHH
VKTLREKAVTISEKKALVALYQYNQVASSSRIVWAKLGYSRLLKLKDSSVYVPTWIFAVR
HHHHHHHHHEECCCCEEEEEEHHHHHCCCCCEEEEECCHHHHEEECCCCEEEEEEEEEEE
GKNSSNVTLHRINAFTGSSMKNGSTASDTSSLDATVGMMWNAID
CCCCCCEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]