| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is 28377003
Identifier: 28377003
GI number: 28377003
Start: 36963
End: 37196
Strand: Direct
Name: 28377003
Synonym: lp_0032
Alternate gene names: NA
Gene position: 36963-37196 (Clockwise)
Preceding gene: 28377002
Following gene: 28377004
Centisome position: 1.12
GC content: 45.3
Gene sequence:
>234_bases GTGGTCGGAATGGATTTTGTAGATGTTTACGGCATTAAGCATGAGAATTGTACGTTAGTTGCACCTGCGCGTGAATATCA GCGGGTCGTTATTTTTATGGACGCATTGGGCCGGCGCTTTGTTGCAATGGGACCGGATCCACAACCAACTAAATATGGAA GTAGTAGCCAACATTGGCATCAAGCACAGCCGAGTGCAGCTCCTGAAGGTTATTTCCATATTGATCAAGAATAA
Upstream 100 bases:
>100_bases AACGTTCAACCACAATAGTAACTGTTGGGCCGAACCATTATCATTAACTGGTTCGGTTTTTATTTGAAGTGACGGGTTGT CAGCTAAACAAGAAAGCTAA
Downstream 100 bases:
>100_bases CCCTAGCAATTGAGTTACTTAGCTACGCTGATGGTAAACATTAGATCGTTAGAAAAAGCCTCAGGGACGTCACACGCACT TTGCGTTGTGCTTCCTGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 77; Mature: 77
Protein sequence:
>77_residues MVGMDFVDVYGIKHENCTLVAPAREYQRVVIFMDALGRRFVAMGPDPQPTKYGSSSQHWHQAQPSAAPEGYFHIDQE
Sequences:
>Translated_77_residues MVGMDFVDVYGIKHENCTLVAPAREYQRVVIFMDALGRRFVAMGPDPQPTKYGSSSQHWHQAQPSAAPEGYFHIDQE >Mature_77_residues MVGMDFVDVYGIKHENCTLVAPAREYQRVVIFMDALGRRFVAMGPDPQPTKYGSSSQHWHQAQPSAAPEGYFHIDQE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8711; Mature: 8711
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGMDFVDVYGIKHENCTLVAPAREYQRVVIFMDALGRRFVAMGPDPQPTKYGSSSQHWH CCCCCCEEEECCCCCCEEEECCCHHHEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCC QAQPSAAPEGYFHIDQE CCCCCCCCCCEEEECCC >Mature Secondary Structure MVGMDFVDVYGIKHENCTLVAPAREYQRVVIFMDALGRRFVAMGPDPQPTKYGSSSQHWH CCCCCCEEEECCCCCCEEEECCCHHHEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCC QAQPSAAPEGYFHIDQE CCCCCCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA