| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28211958
Identifier: 28211958
GI number: 28211958
Start: 2504881
End: 2505288
Strand: Direct
Name: 28211958
Synonym: CTC02365
Alternate gene names: NA
Gene position: 2504881-2505288 (Clockwise)
Preceding gene: 28211956
Following gene: 28211963
Centisome position: 89.48
GC content: 24.26
Gene sequence:
>408_bases GTGTATTCATCTATAGCTAATTTTATTAATTCTAATGAATGTTTATCTTTAATATCCAGATATATATTTAATTTATTTTC TTTTTCTTCTAAATCTTTTTTTTCTAAGGTTCTACAACCTACAGGAAGAAATAAAAGAATAATTGATATAAATATTATTA TTCTTTTGATTTTCAAGGTTTTTATCATATGTATTACCTCCAAGATAAATTTTTACCACATTTATTCTATAATTAAGTAT TATCTATTATTTATATTTTTACCAACTTCTAAAAAACTAGTCATTTTCAAAAACAAAAAAAGGGACCGACTACCGGTCCC AAGGGGGATGGGGGGTTCTAGCACTAAATTAAGTTTCTTACTTTATTTAGTACTAAGGAGATTATATCTCCTTTTACATT TATTATGA
Upstream 100 bases:
>100_bases ATTTGTAAATATTAAATCCATTTTCTTTTCTGATATATCTTTTTTACTACTATCTCCTATAGAGTTAATTGTATTAATTT TTACTTTTGAGTTCTCTTTT
Downstream 100 bases:
>100_bases TACCCATTTTATAATCTTTTATTCACTTTTTATTAAATATTTATATATAAAAAGAGAAAGACAAAAGTCTTCCTTTTTTT ATTTTTTGCTTATCAATCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MYSSIANFINSNECLSLISRYIFNLFSFSSKSFFSKVLQPTGRNKRIIDINIIILLIFKVFIICITSKINFYHIYSIIKY YLLFIFLPTSKKLVIFKNKKRDRLPVPRGMGGSSTKLSFLLYLVLRRLYLLLHLL
Sequences:
>Translated_135_residues MYSSIANFINSNECLSLISRYIFNLFSFSSKSFFSKVLQPTGRNKRIIDINIIILLIFKVFIICITSKINFYHIYSIIKY YLLFIFLPTSKKLVIFKNKKRDRLPVPRGMGGSSTKLSFLLYLVLRRLYLLLHLL >Mature_135_residues MYSSIANFINSNECLSLISRYIFNLFSFSSKSFFSKVLQPTGRNKRIIDINIIILLIFKVFIICITSKINFYHIYSIIKY YLLFIFLPTSKKLVIFKNKKRDRLPVPRGMGGSSTKLSFLLYLVLRRLYLLLHLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15902; Mature: 15902
Theoretical pI: Translated: 10.92; Mature: 10.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSSIANFINSNECLSLISRYIFNLFSFSSKSFFSKVLQPTGRNKRIIDINIIILLIFKV CCHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEHHHHHHHHHHHH FIICITSKINFYHIYSIIKYYLLFIFLPTSKKLVIFKNKKRDRLPVPRGMGGSSTKLSFL HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHH LYLVLRRLYLLLHLL HHHHHHHHHHHHHCC >Mature Secondary Structure MYSSIANFINSNECLSLISRYIFNLFSFSSKSFFSKVLQPTGRNKRIIDINIIILLIFKV CCHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEHHHHHHHHHHHH FIICITSKINFYHIYSIIKYYLLFIFLPTSKKLVIFKNKKRDRLPVPRGMGGSSTKLSFL HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHH LYLVLRRLYLLLHLL HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA