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The map label for this gene is perR [H]

Identifier: 28211956

GI number: 28211956

Start: 2503382

End: 2503804

Strand: Direct

Name: perR [H]

Synonym: CTC02363

Alternate gene names: 28211956

Gene position: 2503382-2503804 (Clockwise)

Preceding gene: 28211955

Following gene: 28211958

Centisome position: 89.43

GC content: 25.77

Gene sequence:

>423_bases
ATGAATAATATTACTGCTATTTTCAAAGAAAAAAAATTGAAACTTACACCTCAACGTATTGCAGTATATAAATATTTAAA
ATCTACTAATGAACATCCCTCTGCAGAAACTATATATAAATCTTTGCAACCAGAATATCCTACTATGAGTTTAGCTACGG
TATATAAAACATTAAAAACTTTAGTAGAAGTAGATTTAATTCAAGAAATCAATGTAGGAGAAGGTAATTTCAGATATGAT
GCAAAAATGAATCCTCATTCTCATATTCAATGCCTTAGTTGTGGAAAAGTAGATGATATAAACAATATAAACTTTGAAAG
TTTAAATGATAAGATTAAATCTTATACAGATTATGATGTTTTAAGCAATCAAGTATATTTTTATGGCATATGTAGTTGTT
GTAAGAAAAGTAATTCCCATTAA

Upstream 100 bases:

>100_bases
ACTGTTTTATAATATTGAATAGCATTTGAAAATAATTGACAAAAGATAATTTTTATTATATAATAATAGAAATTGTATTT
AATTAAAAGGATAATGTATA

Downstream 100 bases:

>100_bases
AAAACAGTAGAAATATTTCTACTGTTTTTTAATTCACTTATTTAATTTCTTCTAATATTTCATCGTACTCTTTTCCTGTA
TAATTACCTGATAATATTTT

Product: putative Zinc uptake regulation protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MNNITAIFKEKKLKLTPQRIAVYKYLKSTNEHPSAETIYKSLQPEYPTMSLATVYKTLKTLVEVDLIQEINVGEGNFRYD
AKMNPHSHIQCLSCGKVDDINNINFESLNDKIKSYTDYDVLSNQVYFYGICSCCKKSNSH

Sequences:

>Translated_140_residues
MNNITAIFKEKKLKLTPQRIAVYKYLKSTNEHPSAETIYKSLQPEYPTMSLATVYKTLKTLVEVDLIQEINVGEGNFRYD
AKMNPHSHIQCLSCGKVDDINNINFESLNDKIKSYTDYDVLSNQVYFYGICSCCKKSNSH
>Mature_140_residues
MNNITAIFKEKKLKLTPQRIAVYKYLKSTNEHPSAETIYKSLQPEYPTMSLATVYKTLKTLVEVDLIQEINVGEGNFRYD
AKMNPHSHIQCLSCGKVDDINNINFESLNDKIKSYTDYDVLSNQVYFYGICSCCKKSNSH

Specific function: Manganese-dependent repressor that controls a regulon of oxidative stress resistance and iron-storage proteins. May act as a hydrogen peroxide and organic hydroperoxide sensor [H]

COG id: COG0735

COG function: function code P; Fe2+/Zn2+ uptake regulation proteins

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Fur family [H]

Homologues:

Organism=Escherichia coli, GI1786899, Length=145, Percent_Identity=26.8965517241379, Blast_Score=62, Evalue=1e-11,

Paralogues:

None

Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002481 [H]

Pfam domain/function: PF01475 FUR [H]

EC number: NA

Molecular weight: Translated: 16087; Mature: 16087

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNITAIFKEKKLKLTPQRIAVYKYLKSTNEHPSAETIYKSLQPEYPTMSLATVYKTLKT
CCCCHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHH
LVEVDLIQEINVGEGNFRYDAKMNPHSHIQCLSCGKVDDINNINFESLNDKIKSYTDYDV
HHHHHHHHHCCCCCCCEEEECCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCHHH
LSNQVYFYGICSCCKKSNSH
HHCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNNITAIFKEKKLKLTPQRIAVYKYLKSTNEHPSAETIYKSLQPEYPTMSLATVYKTLKT
CCCCHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHH
LVEVDLIQEINVGEGNFRYDAKMNPHSHIQCLSCGKVDDINNINFESLNDKIKSYTDYDV
HHHHHHHHHCCCCCCCEEEECCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCHHH
LSNQVYFYGICSCCKKSNSH
HHCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA