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The map label for this gene is ykwD [H]

Identifier: 28211946

GI number: 28211946

Start: 2493120

End: 2493731

Strand: Direct

Name: ykwD [H]

Synonym: CTC02353

Alternate gene names: 28211946

Gene position: 2493120-2493731 (Clockwise)

Preceding gene: 28211934

Following gene: 28211952

Centisome position: 89.06

GC content: 33.33

Gene sequence:

>612_bases
ATGTTAAAAAAATTAATTGTTCCATTAAGTTTAAGCTTAGCGCTAACATTTCCAGTAGCAGCAAAGGCCCAAGGTACATA
TACTGTTCAAAAAGGTGACAGCCTTTGGAAAATAGCAGTGAAAAATCAGGTTGGATTGGACGAGCTAATAAGTTCTAATC
CACAGCTAAAAAATCCTAGCTTAATCTATCCTGGTGCAAAAATATCCATTCCAAGTTCAAACGAAACTAAATCTATGGAA
ACAGAAGTTGTAAGACTAGTTAATATTGAAAGAGCCAATAATGGTTTGGCTCCATTAAAGGAAAATTGGGAGCTTTCTAG
AGTAGCAAGATTTAAATCTAACGACATGATAGCTAAAAACTATTTTTCTCATACTTCACCTACTTACGGATCTCCATTTA
AAATGATGAATTCATTTGGATTAAAATACTCATCTGCTGGTGAAAATATTGCCATGGGTCAAAGAACTCCAAAAGAAGTT
GTACAAGGTTGGATGAATTCTCCAGGACATAGACGTAATATTTTAAATAAAAACTTTACAGAAATTGGAGTGGGTGTATC
TAAAGATTCTAAAGGAAATCCTTATTGGACACAAATGTTTATAAGACCATAA

Upstream 100 bases:

>100_bases
TTAACTTATAGGAATAATATACATATTAAACACATTATCTCATTATTTGATTATTGTTCGTAAAAAAAATTTATGCCATA
CTTAATATCGAGGTGATTTT

Downstream 100 bases:

>100_bases
TATAGATTGTAACTAAAAGAGAGTTAAAATATAATTTTAGCTCTCTTCTTTATTTTATGTTTTTAAACTATTTTTTTTTA
AACAATACCATTTTAGCTTC

Product: transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MLKKLIVPLSLSLALTFPVAAKAQGTYTVQKGDSLWKIAVKNQVGLDELISSNPQLKNPSLIYPGAKISIPSSNETKSME
TEVVRLVNIERANNGLAPLKENWELSRVARFKSNDMIAKNYFSHTSPTYGSPFKMMNSFGLKYSSAGENIAMGQRTPKEV
VQGWMNSPGHRRNILNKNFTEIGVGVSKDSKGNPYWTQMFIRP

Sequences:

>Translated_203_residues
MLKKLIVPLSLSLALTFPVAAKAQGTYTVQKGDSLWKIAVKNQVGLDELISSNPQLKNPSLIYPGAKISIPSSNETKSME
TEVVRLVNIERANNGLAPLKENWELSRVARFKSNDMIAKNYFSHTSPTYGSPFKMMNSFGLKYSSAGENIAMGQRTPKEV
VQGWMNSPGHRRNILNKNFTEIGVGVSKDSKGNPYWTQMFIRP
>Mature_203_residues
MLKKLIVPLSLSLALTFPVAAKAQGTYTVQKGDSLWKIAVKNQVGLDELISSNPQLKNPSLIYPGAKISIPSSNETKSME
TEVVRLVNIERANNGLAPLKENWELSRVARFKSNDMIAKNYFSHTSPTYGSPFKMMNSFGLKYSSAGENIAMGQRTPKEV
VQGWMNSPGHRRNILNKNFTEIGVGVSKDSKGNPYWTQMFIRP

Specific function: Unknown

COG id: COG2340

COG function: function code S; Uncharacterized protein with SCP/PR1 domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SCP domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014044
- InterPro:   IPR014258 [H]

Pfam domain/function: PF00188 SCP [H]

EC number: NA

Molecular weight: Translated: 22565; Mature: 22565

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKLIVPLSLSLALTFPVAAKAQGTYTVQKGDSLWKIAVKNQVGLDELISSNPQLKNPS
CCCCEEECEEEEEEEECCEEECCCCCEEEECCCCEEEEEECCCCCHHHHHCCCCCCCCCC
LIYPGAKISIPSSNETKSMETEVVRLVNIERANNGLAPLKENWELSRVARFKSNDMIAKN
EECCCCEEECCCCCCCHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHHHHCCCCCHHHH
YFSHTSPTYGSPFKMMNSFGLKYSSAGENIAMGQRTPKEVVQGWMNSPGHRRNILNKNFT
HCCCCCCCCCCHHHHHHHHCCEECCCCCEEECCCCCHHHHHHHHHCCCCHHHHHCCCCCH
EIGVGVSKDSKGNPYWTQMFIRP
HHCCCCCCCCCCCCEEEEEEECC
>Mature Secondary Structure
MLKKLIVPLSLSLALTFPVAAKAQGTYTVQKGDSLWKIAVKNQVGLDELISSNPQLKNPS
CCCCEEECEEEEEEEECCEEECCCCCEEEECCCCEEEEEECCCCCHHHHHCCCCCCCCCC
LIYPGAKISIPSSNETKSMETEVVRLVNIERANNGLAPLKENWELSRVARFKSNDMIAKN
EECCCCEEECCCCCCCHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHHHHCCCCCHHHH
YFSHTSPTYGSPFKMMNSFGLKYSSAGENIAMGQRTPKEVVQGWMNSPGHRRNILNKNFT
HCCCCCCCCCCHHHHHHHHCCEECCCCCEEECCCCCHHHHHHHHHCCCCHHHHHCCCCCH
EIGVGVSKDSKGNPYWTQMFIRP
HHCCCCCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]