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The map label for this gene is dcrH

Identifier: 28211952

GI number: 28211952

Start: 2499675

End: 2500088

Strand: Direct

Name: dcrH

Synonym: CTC02359

Alternate gene names: NA

Gene position: 2499675-2500088 (Clockwise)

Preceding gene: 28211946

Following gene: 28211954

Centisome position: 89.3

GC content: 25.6

Gene sequence:

>414_bases
ATGTTTAACTGGAAAGAAGATTTTTCTTGTAATATTGCAAGTATAGATGCTCAGCATAAGAAATTATTTGAATTAGCTAA
TGAACTCTATAATTTACTTTCTCTAAAAGATGAGTATGACAGATATGATGATATTTTAAATACTCTATCTGAACTTCAAA
AATATACAGTGTATCATTTTGGCTATGAAGAGGATTTAATGAAGAGCGTAAATTATCCTAATTTTGAATGTCATAAAAAA
CAACATGATAACTTTGTAAAAAAAGTAACCAATATAGATAAAGCTTATATAGATGAAAATCAAAAGGAAGTTTTAAGGGA
TTTATTACTTTTTATTGTGGATTGGATAGAAGGACATATACTAAAAATAGATATGCAGTACAAAGAGCTTTTTAAGGAAA
AGTGTATAAAATAG

Upstream 100 bases:

>100_bases
GATAAAGTCAAGTGTATTTTATAAGAAAACAAATTTCAATTTTATAGAAACCTATTCAATATGCTATAATGTTAATATAC
CAATTTAAAGGGGGACTAAA

Downstream 100 bases:

>100_bases
GATAGTAAATTAGGCATGTACAATTGCGTACATGCCTAATTTACTATCCTATTGTCAAAGGAATAAAATCATCGTATCTT
TCTAACATATGAGAATTATA

Product: hemerythrin-like domain-containing protein DcrH

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MFNWKEDFSCNIASIDAQHKKLFELANELYNLLSLKDEYDRYDDILNTLSELQKYTVYHFGYEEDLMKSVNYPNFECHKK
QHDNFVKKVTNIDKAYIDENQKEVLRDLLLFIVDWIEGHILKIDMQYKELFKEKCIK

Sequences:

>Translated_137_residues
MFNWKEDFSCNIASIDAQHKKLFELANELYNLLSLKDEYDRYDDILNTLSELQKYTVYHFGYEEDLMKSVNYPNFECHKK
QHDNFVKKVTNIDKAYIDENQKEVLRDLLLFIVDWIEGHILKIDMQYKELFKEKCIK
>Mature_137_residues
MFNWKEDFSCNIASIDAQHKKLFELANELYNLLSLKDEYDRYDDILNTLSELQKYTVYHFGYEEDLMKSVNYPNFECHKK
QHDNFVKKVTNIDKAYIDENQKEVLRDLLLFIVDWIEGHILKIDMQYKELFKEKCIK

Specific function: Oxygen-binding protein. May be involved in a storage mechanism or for delivery to oxygen-requiring enzymes. The oxygen- binding site contains two iron atoms [H]

COG id: COG2703

COG function: function code P; Hemerythrin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hemerythrin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012827
- InterPro:   IPR012312
- InterPro:   IPR016131 [H]

Pfam domain/function: PF01814 Hemerythrin [H]

EC number: NA

Molecular weight: Translated: 16644; Mature: 16644

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: PS00550 HEMERYTHRINS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNWKEDFSCNIASIDAQHKKLFELANELYNLLSLKDEYDRYDDILNTLSELQKYTVYHF
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GYEEDLMKSVNYPNFECHKKQHDNFVKKVTNIDKAYIDENQKEVLRDLLLFIVDWIEGHI
CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCE
LKIDMQYKELFKEKCIK
EEEEHHHHHHHHHHCCC
>Mature Secondary Structure
MFNWKEDFSCNIASIDAQHKKLFELANELYNLLSLKDEYDRYDDILNTLSELQKYTVYHF
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GYEEDLMKSVNYPNFECHKKQHDNFVKKVTNIDKAYIDENQKEVLRDLLLFIVDWIEGHI
CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCE
LKIDMQYKELFKEKCIK
EEEEHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11466286 [H]