Definition Clostridium tetani E88 chromosome, complete genome.
Accession NC_004557
Length 2,799,251

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The map label for this gene is 28211886

Identifier: 28211886

GI number: 28211886

Start: 2413829

End: 2414548

Strand: Direct

Name: 28211886

Synonym: CTC02288

Alternate gene names: NA

Gene position: 2413829-2414548 (Clockwise)

Preceding gene: 28211881

Following gene: 28211890

Centisome position: 86.23

GC content: 26.94

Gene sequence:

>720_bases
TTGCTAGGTGATGTAGTTATGAAATATTTATTTGTAGATGGAAGAATATCTATAGAAGAAGAATACAATTTAATGTCATT
AGAGTACAATATTATAAAATGCCCTATATTCTCTTTATTATACTATGCTATTTCTGGTCATCCTGACATCCTTATCCATG
TGTTAGACGAAAAGAATTTAATCTTGCACAAAGATATAGATAAAGAGTTTATAAAAAAATTAAAAAATTTAAATTTTAAT
ATAAAACTATCTAAAAACTCACTATCTTCTAATTACCCCATGAACATAGGGTTAAATGCAGTAAACTTAAGTAATGTTTT
TATACATAATTTAAAATACACCGATCCTGTTTTAATAGAAAATGTTAAAGACAAGAATTTAATAAATGTAAAACAAGGCT
ATACTAAATGTTCTGTAGCAGTAGTTAGCGATAATGCAATAATAACTTCGGATAAAATTATTGCACAGAAAGCTAAAGAA
GTTTCTATTGATGTTCTATTAATTCCTCCTGGGGACATAATTTTACCTGGATTAGACTATGGATTTATAGGGGGGTGCTG
TGGACTTATAGAAAAGGATTTGATGGCATTTTTCGGTGATTTGAATTATTTTAATTATGGCAATGAAATAAAAGAATTTT
TATATAAACATAATGTAACACCTATTTACTTAAAAAAAGGAAAGCTCATAGACAGAGGAAGCATTTTGTGTAATGAATAA

Upstream 100 bases:

>100_bases
TTTAAATATTGCCATATATTTCACTCCCTTCTGTCATAGTATGTGTTTTATTTTTATGTATATTCATATTGAAATTATTA
AAAATTTGATATAGAATTTA

Downstream 100 bases:

>100_bases
TTATGGATAGCTTTTCTCCATTGTCATTTCGAAAAGTTTTTAATTTTATAAAATCTTTTCGTTTAGTTAATGCTAAACTT
TTCTAATCTCCATACAGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MLGDVVMKYLFVDGRISIEEEYNLMSLEYNIIKCPIFSLLYYAISGHPDILIHVLDEKNLILHKDIDKEFIKKLKNLNFN
IKLSKNSLSSNYPMNIGLNAVNLSNVFIHNLKYTDPVLIENVKDKNLINVKQGYTKCSVAVVSDNAIITSDKIIAQKAKE
VSIDVLLIPPGDIILPGLDYGFIGGCCGLIEKDLMAFFGDLNYFNYGNEIKEFLYKHNVTPIYLKKGKLIDRGSILCNE

Sequences:

>Translated_239_residues
MLGDVVMKYLFVDGRISIEEEYNLMSLEYNIIKCPIFSLLYYAISGHPDILIHVLDEKNLILHKDIDKEFIKKLKNLNFN
IKLSKNSLSSNYPMNIGLNAVNLSNVFIHNLKYTDPVLIENVKDKNLINVKQGYTKCSVAVVSDNAIITSDKIIAQKAKE
VSIDVLLIPPGDIILPGLDYGFIGGCCGLIEKDLMAFFGDLNYFNYGNEIKEFLYKHNVTPIYLKKGKLIDRGSILCNE
>Mature_239_residues
MLGDVVMKYLFVDGRISIEEEYNLMSLEYNIIKCPIFSLLYYAISGHPDILIHVLDEKNLILHKDIDKEFIKKLKNLNFN
IKLSKNSLSSNYPMNIGLNAVNLSNVFIHNLKYTDPVLIENVKDKNLINVKQGYTKCSVAVVSDNAIITSDKIIAQKAKE
VSIDVLLIPPGDIILPGLDYGFIGGCCGLIEKDLMAFFGDLNYFNYGNEIKEFLYKHNVTPIYLKKGKLIDRGSILCNE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27045; Mature: 27045

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGDVVMKYLFVDGRISIEEEYNLMSLEYNIIKCPIFSLLYYAISGHPDILIHVLDEKNL
CHHHHEEHHHEECCEEEECCCCCEEEEEEEEEECHHHHHHHHHHCCCCEEEEEEECCCCE
ILHKDIDKEFIKKLKNLNFNIKLSKNSLSSNYPMNIGLNAVNLSNVFIHNLKYTDPVLIE
EEEECCCHHHHHHHHCCCEEEEECCCCCCCCCCEEECCEEEEECEEEEEECCCCCCCEEE
NVKDKNLINVKQGYTKCSVAVVSDNAIITSDKIIAQKAKEVSIDVLLIPPGDIILPGLDY
CCCCCCEEEECCCCCEEEEEEEECCEEEECCHHHHHHHHHCEEEEEEECCCCEEECCCCC
GFIGGCCGLIEKDLMAFFGDLNYFNYGNEIKEFLYKHNVTPIYLKKGKLIDRGSILCNE
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEECCCEEECCCEEECC
>Mature Secondary Structure
MLGDVVMKYLFVDGRISIEEEYNLMSLEYNIIKCPIFSLLYYAISGHPDILIHVLDEKNL
CHHHHEEHHHEECCEEEECCCCCEEEEEEEEEECHHHHHHHHHHCCCCEEEEEEECCCCE
ILHKDIDKEFIKKLKNLNFNIKLSKNSLSSNYPMNIGLNAVNLSNVFIHNLKYTDPVLIE
EEEECCCHHHHHHHHCCCEEEEECCCCCCCCCCEEECCEEEEECEEEEEECCCCCCCEEE
NVKDKNLINVKQGYTKCSVAVVSDNAIITSDKIIAQKAKEVSIDVLLIPPGDIILPGLDY
CCCCCCEEEECCCCCEEEEEEEECCEEEECCHHHHHHHHHCEEEEEEECCCCEEECCCCC
GFIGGCCGLIEKDLMAFFGDLNYFNYGNEIKEFLYKHNVTPIYLKKGKLIDRGSILCNE
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEECCCEEECCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA