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The map label for this gene is bioY [H]

Identifier: 28211709

GI number: 28211709

Start: 2222188

End: 2222742

Strand: Direct

Name: bioY [H]

Synonym: CTC02091

Alternate gene names: 28211709

Gene position: 2222188-2222742 (Clockwise)

Preceding gene: 28211707

Following gene: 28211722

Centisome position: 79.39

GC content: 30.27

Gene sequence:

>555_bases
ATGAAAAATAAATTTTCAGTAAGAGATTTAAGTATAGTAGCTACTTTTACTGCTCTAACAGCAGTTATGTCTCAAATTTC
TATTCCCATTCCCTTTAGTCCTGTACCTATAACTCTTCAAATTTTTGCTATATATTTAGCCGCAATTATTTTAGGAAGTA
GACTTGCCACATTATCACAAATTATTTATCTATTGCTTGGAGCAATAGGTGCTCCTGTATTTTCTCATTTCTCTGGTGGG
CTTCAATCTTTAGTAGGCCCTACAGGTGGATTTTTAATAAGTTTTCCTATAGTTGCATTTATTGTTGGAAAAATTTCAGA
AAAGGATAGAGGATTTTTTGCATTAACTTTTGGACTAATAATCTCATTAATACTTTGTTACAGCATGGGAACATTACAAT
TATCCTTTGTTGCAAAAATTTCTATAAATAAAGCTATAATGGTGGGCGCTGTTCCCTTCATTCCTTTAGATTTAGCAAAA
ATATTTACAGCTTACTTAATAGGTACAAAAGTTAAAAGTTCCCTTATTAAATCCAATCTTTTAAATACAAAATAA

Upstream 100 bases:

>100_bases
TAATTAGTCCAATGTTGACAAATGAAAATATTTAAAATATAATTTATTTGTCATCTTAATATATATTAATGGTTAACAAT
TAAATTATGGAGGTTTTATT

Downstream 100 bases:

>100_bases
AAAAGCTGCAACAAGCAGCTTTTTATTGATGTATAATGAACAACCAACAATGAATTATTATGGATATTTTTCTCCATTAT
CATTACGAAAAAATTTTAAT

Product: bioY protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MKNKFSVRDLSIVATFTALTAVMSQISIPIPFSPVPITLQIFAIYLAAIILGSRLATLSQIIYLLLGAIGAPVFSHFSGG
LQSLVGPTGGFLISFPIVAFIVGKISEKDRGFFALTFGLIISLILCYSMGTLQLSFVAKISINKAIMVGAVPFIPLDLAK
IFTAYLIGTKVKSSLIKSNLLNTK

Sequences:

>Translated_184_residues
MKNKFSVRDLSIVATFTALTAVMSQISIPIPFSPVPITLQIFAIYLAAIILGSRLATLSQIIYLLLGAIGAPVFSHFSGG
LQSLVGPTGGFLISFPIVAFIVGKISEKDRGFFALTFGLIISLILCYSMGTLQLSFVAKISINKAIMVGAVPFIPLDLAK
IFTAYLIGTKVKSSLIKSNLLNTK
>Mature_184_residues
MKNKFSVRDLSIVATFTALTAVMSQISIPIPFSPVPITLQIFAIYLAAIILGSRLATLSQIIYLLLGAIGAPVFSHFSGG
LQSLVGPTGGFLISFPIVAFIVGKISEKDRGFFALTFGLIISLILCYSMGTLQLSFVAKISINKAIMVGAVPFIPLDLAK
IFTAYLIGTKVKSSLIKSNLLNTK

Specific function: Probable biotin transporter [H]

COG id: COG1268

COG function: function code R; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BioY family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003784 [H]

Pfam domain/function: PF02632 BioY [H]

EC number: NA

Molecular weight: Translated: 19631; Mature: 19631

Theoretical pI: Translated: 10.69; Mature: 10.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNKFSVRDLSIVATFTALTAVMSQISIPIPFSPVPITLQIFAIYLAAIILGSRLATLSQ
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IIYLLLGAIGAPVFSHFSGGLQSLVGPTGGFLISFPIVAFIVGKISEKDRGFFALTFGLI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
ISLILCYSMGTLQLSFVAKISINKAIMVGAVPFIPLDLAKIFTAYLIGTKVKSSLIKSNL
HHHHHHHCCCHHHHHHHHHHHCCHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
LNTK
CCCC
>Mature Secondary Structure
MKNKFSVRDLSIVATFTALTAVMSQISIPIPFSPVPITLQIFAIYLAAIILGSRLATLSQ
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IIYLLLGAIGAPVFSHFSGGLQSLVGPTGGFLISFPIVAFIVGKISEKDRGFFALTFGLI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
ISLILCYSMGTLQLSFVAKISINKAIMVGAVPFIPLDLAKIFTAYLIGTKVKSSLIKSNL
HHHHHHHCCCHHHHHHHHHHHCCHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
LNTK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]