| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28211722
Identifier: 28211722
GI number: 28211722
Start: 2241760
End: 2242416
Strand: Direct
Name: 28211722
Synonym: CTC02105
Alternate gene names: NA
Gene position: 2241760-2242416 (Clockwise)
Preceding gene: 28211709
Following gene: 28211750
Centisome position: 80.08
GC content: 26.03
Gene sequence:
>657_bases ATGCATAAATTAGAATACGAATTTGTAAACAATACTCCTATTTTTAAATGCAATTATTGTGGACATTGCAGCAAAGAAAT AGAGGCAACATCATTTACTTCAGTAAAAAATAGAGGTTGCTGTTGGTATTTTCCAAAGTATACCTTATTAAACATAAAAA ATATTCTAAATATTGGTAAAGAAAATTTCATAATTTCTCTTCTAAACAATAAAAATTCAAATATATCCAGTTATTTCATA GAAGTTAAAGGTTCCTTTGAAGAAGAAGAATATTACAAATTTATGAGAGAAAATGAATATACTGAAAGTTCTTTTGACTA TAAATTATTTTTTAGAAAATGTTCTTTTGTTACAGATAAAGGATGTTCTTTAGATTTTTCTCTAAGACCTCATCCTTGTA ATCTGTATCTATGTAGAAATATTATTAACACCTGTGATAAAGACTACTCATCTTTTTCAAGAGAACGAAAGGATTATTTT TCATATTGTAATTATTACAATGAATACTTAAAATATGCCCTTATGGATAAAAATCTAGATTTAATTTCAGCTCCACTAGC TACTTTAGAATTTTTAAAAACCATCTCTATACCTAATTTTGAGCCTAGTGAAATTAAGTCTATAGTTTTCAATCCCTATG GAGATGTAGCAAGCTAA
Upstream 100 bases:
>100_bases TTCTACCTTTAATTTATATTTATTTTTTATTATATATACATATTGTAATTTACATTTTATTGAATTAAATTTATATTATT AAATTTTTTGGAGGTGTAAT
Downstream 100 bases:
>100_bases ATATTATGAAAAATGAGAGGGCTTCCCTCTCATTTAAGTTAGCAATATTTTTTATCAAATTCTTCTAAGTTCTTTATCTC TTTTTTCTTTTCAACTATCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MHKLEYEFVNNTPIFKCNYCGHCSKEIEATSFTSVKNRGCCWYFPKYTLLNIKNILNIGKENFIISLLNNKNSNISSYFI EVKGSFEEEEYYKFMRENEYTESSFDYKLFFRKCSFVTDKGCSLDFSLRPHPCNLYLCRNIINTCDKDYSSFSRERKDYF SYCNYYNEYLKYALMDKNLDLISAPLATLEFLKTISIPNFEPSEIKSIVFNPYGDVAS
Sequences:
>Translated_218_residues MHKLEYEFVNNTPIFKCNYCGHCSKEIEATSFTSVKNRGCCWYFPKYTLLNIKNILNIGKENFIISLLNNKNSNISSYFI EVKGSFEEEEYYKFMRENEYTESSFDYKLFFRKCSFVTDKGCSLDFSLRPHPCNLYLCRNIINTCDKDYSSFSRERKDYF SYCNYYNEYLKYALMDKNLDLISAPLATLEFLKTISIPNFEPSEIKSIVFNPYGDVAS >Mature_218_residues MHKLEYEFVNNTPIFKCNYCGHCSKEIEATSFTSVKNRGCCWYFPKYTLLNIKNILNIGKENFIISLLNNKNSNISSYFI EVKGSFEEEEYYKFMRENEYTESSFDYKLFFRKCSFVTDKGCSLDFSLRPHPCNLYLCRNIINTCDKDYSSFSRERKDYF SYCNYYNEYLKYALMDKNLDLISAPLATLEFLKTISIPNFEPSEIKSIVFNPYGDVAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25757; Mature: 25757
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 5.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKLEYEFVNNTPIFKCNYCGHCSKEIEATSFTSVKNRGCCWYFPKYTLLNIKNILNIGK CCCEEEEEECCCCEEEECCCCCCCCCCCHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCC ENFIISLLNNKNSNISSYFIEVKGSFEEEEYYKFMRENEYTESSFDYKLFFRKCSFVTDK CCEEEEEECCCCCCCEEEEEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCC GCSLDFSLRPHPCNLYLCRNIINTCDKDYSSFSRERKDYFSYCNYYNEYLKYALMDKNLD CCEEEEECCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH LISAPLATLEFLKTISIPNFEPSEIKSIVFNPYGDVAS HHHHHHHHHHHHHHHCCCCCCHHHHHHEEECCCCCCCC >Mature Secondary Structure MHKLEYEFVNNTPIFKCNYCGHCSKEIEATSFTSVKNRGCCWYFPKYTLLNIKNILNIGK CCCEEEEEECCCCEEEECCCCCCCCCCCHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCC ENFIISLLNNKNSNISSYFIEVKGSFEEEEYYKFMRENEYTESSFDYKLFFRKCSFVTDK CCEEEEEECCCCCCCEEEEEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCC GCSLDFSLRPHPCNLYLCRNIINTCDKDYSSFSRERKDYFSYCNYYNEYLKYALMDKNLD CCEEEEECCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH LISAPLATLEFLKTISIPNFEPSEIKSIVFNPYGDVAS HHHHHHHHHHHHHHHCCCCCCHHHHHHEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA