| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28211577
Identifier: 28211577
GI number: 28211577
Start: 2073188
End: 2074369
Strand: Direct
Name: 28211577
Synonym: CTC01949
Alternate gene names: NA
Gene position: 2073188-2074369 (Clockwise)
Preceding gene: 28211574
Following gene: 28211581
Centisome position: 74.06
GC content: 32.23
Gene sequence:
>1182_bases ATGACAAGAACATTAGGAACGGAAGTTAAGGGTATAAGAGCCCCTATAGTAAAAAAAGGAGACAATTTAGTTAAAATAGT AGTAGATTCTATATTAACCTCTTCAGAAAAGGAAGGTTACCTTCTAAGAGATAAAGACGTAATAGGGGTAACTGAGTCTC TTGTAGCTAGGGCTCAAGGAAACTATGTAACCATTGATGAGGTTGCAGCTGACATAAATAGAAAGTTTAAAGGGGACATC GGTGTTGTTTTCCCTATTCTAAGTAGAAATAGATTTTCTATAATACTAAAGGCAATTGCAAAAACAGGAAAGAAAATACA CATACTGCTAAGTTATCCTTCAGATGAAGTTGGTAACCCTCTTATGGACATAGAAAAAATGTATGATTTAAATATTAATC CACATTCAGACATATTAACTGAAGAAAAATACAGAGAGCTTTTTGGTGAAAAAGTATCTCATAATTTTACAGGTATAGAT TATATAGAATTTTATAAAAGCTTAGGTGATAATATAAGTATATATCTTGCTAATGATCCAAGAGTCATTTTAAATTATAC AAAGGAAGTTTTAGTAGCGGATATTCACTCAAGAAAAAGAACTAAAAGAATTCTTAAAAAGGCTGGAGCAGAAACTGTAT ATGCTTTAGACGAAATTTGTACGGAATCAATTAATGGAAGTGGTTTTAACTCTAATTATGGACTTTTAGGATCTAATAAA TCTACAGAAGAAAAAATAAAACTTTTCCCAAGAGATTGTCAAGTCTTTGTAGAACAGGTTCAAAAAGAACTAAATGAGAA AACTGGCAAAAATGTAGAAGTTATGATTTATGGAGACGGAGCTTTTAAAGACCCTGTAGGTAAGATTTGGGAGCTAGCTG ATCCTGTGGTATCCCCTGGATACACATCTGGATTACATGGAACCCCAAATGAATTAAAATTAAAATATATAGCGGATACA GAGTTAACTAATATGAATAATGAAGATGCTTTAATGGTACTTAAAGATAAAATCAAACACAAAAATGATACCTTAGTTGG TTCAATGGAGGCTCAAGGCACAACTCCAAGGCAAATTACAGATCTTTTAGGAAGTCTATGTGATTTGACTAGTGGGAGTG GTGATAAAGGCACTCCCATAATATTAATTCAAGGTTATTTTGATAATCTTGCTACAGATTAA
Upstream 100 bases:
>100_bases AAATGTATATAGCCTTATATTAATTTTTCAATGAATATTTTATCTAAAGTTTGTAAAATACTAGATTAAAAGACTTTTTA TATTTAGGAGGATTAAAAGT
Downstream 100 bases:
>100_bases AAAGTAATTTGTAATAAACTTTTAATCTTTAGTAACCGTTTTGTTAATATTAGTATATTTTATTATGATATATTAAATAC ATAGCAAATATAACCCTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 393; Mature: 392
Protein sequence:
>393_residues MTRTLGTEVKGIRAPIVKKGDNLVKIVVDSILTSSEKEGYLLRDKDVIGVTESLVARAQGNYVTIDEVAADINRKFKGDI GVVFPILSRNRFSIILKAIAKTGKKIHILLSYPSDEVGNPLMDIEKMYDLNINPHSDILTEEKYRELFGEKVSHNFTGID YIEFYKSLGDNISIYLANDPRVILNYTKEVLVADIHSRKRTKRILKKAGAETVYALDEICTESINGSGFNSNYGLLGSNK STEEKIKLFPRDCQVFVEQVQKELNEKTGKNVEVMIYGDGAFKDPVGKIWELADPVVSPGYTSGLHGTPNELKLKYIADT ELTNMNNEDALMVLKDKIKHKNDTLVGSMEAQGTTPRQITDLLGSLCDLTSGSGDKGTPIILIQGYFDNLATD
Sequences:
>Translated_393_residues MTRTLGTEVKGIRAPIVKKGDNLVKIVVDSILTSSEKEGYLLRDKDVIGVTESLVARAQGNYVTIDEVAADINRKFKGDI GVVFPILSRNRFSIILKAIAKTGKKIHILLSYPSDEVGNPLMDIEKMYDLNINPHSDILTEEKYRELFGEKVSHNFTGID YIEFYKSLGDNISIYLANDPRVILNYTKEVLVADIHSRKRTKRILKKAGAETVYALDEICTESINGSGFNSNYGLLGSNK STEEKIKLFPRDCQVFVEQVQKELNEKTGKNVEVMIYGDGAFKDPVGKIWELADPVVSPGYTSGLHGTPNELKLKYIADT ELTNMNNEDALMVLKDKIKHKNDTLVGSMEAQGTTPRQITDLLGSLCDLTSGSGDKGTPIILIQGYFDNLATD >Mature_392_residues TRTLGTEVKGIRAPIVKKGDNLVKIVVDSILTSSEKEGYLLRDKDVIGVTESLVARAQGNYVTIDEVAADINRKFKGDIG VVFPILSRNRFSIILKAIAKTGKKIHILLSYPSDEVGNPLMDIEKMYDLNINPHSDILTEEKYRELFGEKVSHNFTGIDY IEFYKSLGDNISIYLANDPRVILNYTKEVLVADIHSRKRTKRILKKAGAETVYALDEICTESINGSGFNSNYGLLGSNKS TEEKIKLFPRDCQVFVEQVQKELNEKTGKNVEVMIYGDGAFKDPVGKIWELADPVVSPGYTSGLHGTPNELKLKYIADTE LTNMNNEDALMVLKDKIKHKNDTLVGSMEAQGTTPRQITDLLGSLCDLTSGSGDKGTPIILIQGYFDNLATD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43590; Mature: 43459
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRTLGTEVKGIRAPIVKKGDNLVKIVVDSILTSSEKEGYLLRDKDVIGVTESLVARAQG CCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHCCC NYVTIDEVAADINRKFKGDIGVVFPILSRNRFSIILKAIAKTGKKIHILLSYPSDEVGNP CEEEHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEEECCCHHHCCH LMDIEKMYDLNINPHSDILTEEKYRELFGEKVSHNFTGIDYIEFYKSLGDNISIYLANDP HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEECCCC RVILNYTKEVLVADIHSRKRTKRILKKAGAETVYALDEICTESINGSGFNSNYGLLGSNK EEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC STEEKIKLFPRDCQVFVEQVQKELNEKTGKNVEVMIYGDGAFKDPVGKIWELADPVVSPG CCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCC YTSGLHGTPNELKLKYIADTELTNMNNEDALMVLKDKIKHKNDTLVGSMEAQGTTPRQIT CCCCCCCCCCCEEEEEEECCHHCCCCCCCCEEEEHHHHCCCCCCEEEECCCCCCCHHHHH DLLGSLCDLTSGSGDKGTPIILIQGYFDNLATD HHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCC >Mature Secondary Structure TRTLGTEVKGIRAPIVKKGDNLVKIVVDSILTSSEKEGYLLRDKDVIGVTESLVARAQG CCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHCCC NYVTIDEVAADINRKFKGDIGVVFPILSRNRFSIILKAIAKTGKKIHILLSYPSDEVGNP CEEEHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEEECCCHHHCCH LMDIEKMYDLNINPHSDILTEEKYRELFGEKVSHNFTGIDYIEFYKSLGDNISIYLANDP HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEECCCC RVILNYTKEVLVADIHSRKRTKRILKKAGAETVYALDEICTESINGSGFNSNYGLLGSNK EEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC STEEKIKLFPRDCQVFVEQVQKELNEKTGKNVEVMIYGDGAFKDPVGKIWELADPVVSPG CCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCC YTSGLHGTPNELKLKYIADTELTNMNNEDALMVLKDKIKHKNDTLVGSMEAQGTTPRQIT CCCCCCCCCCCEEEEEEECCHHCCCCCCCCEEEEHHHHCCCCCCEEEECCCCCCCHHHHH DLLGSLCDLTSGSGDKGTPIILIQGYFDNLATD HHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA