| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28211574
Identifier: 28211574
GI number: 28211574
Start: 2070500
End: 2071393
Strand: Direct
Name: 28211574
Synonym: CTC01946
Alternate gene names: NA
Gene position: 2070500-2071393 (Clockwise)
Preceding gene: 28211571
Following gene: 28211577
Centisome position: 73.97
GC content: 22.15
Gene sequence:
>894_bases ATGGAACTAACTAAAATCAAGGGAAGCACTTACTATATAAATGCTCCAACAAATATAGGTGTATATGTCTTTAAAAATAA AAATTGTTTAATAATAGATACAGGTATAAATAATACACAGGCTAGAAAAATAGAAGAAGTTTTGATTAATAATAACCTTC ATCCTAAATATATAATAAATACTCATAGTCACATAGACCATTGTGGTGGAAATAATTATTTTAAAAATAATTATACTGGA TGTCTATTTTATAGTTCAAATAAAGAAAAAGTTTATATGGAAAATATAGAACTTTGTTTTGAAATGTTGTCTGGATCTAA ACCTTTAAAAGAACTAATTAGAACAAATAAGTCTATTAATATAGATTTTGTATTGGATTATGGTATAAACAAAATAAATG ATGAAAAATTTGAAATAATATCGTTAAAGGGTCATACAAAAGAACAAATAGGAATTATAACTCCTGAAAAAGTTTGTTTT TTAGGTGATTCAATATTTAGCTGTGAAACTATGAAAAAATATTCAATACCATATTTGTATGATATTGAAGAAAGTATAAA TACCTTAAATATTATAAAAGATATTGATGCAGATTATTTTGTTTTGGGACATAGTGAAAATATTATAGAAAAAAGTGATT TAAATTCATTAGTAGATAAAAATTTAGATAATATAAAAAATTATATAAATCAAATTTTAGAACTTTTAGATCAACCTTTA ACAAAGGAAGATATACTTCAAAACTTAGCTATATTAAATGATATACCTATGAATTTTACTCAATATCATGTAGATCTTTC AACTGTAGGTTCATTTATAACTTATCTTTATGACAAAGATTATATAGACTCATCTCTTCAAGATGGAAAATTATATTTTT TTAAAAAAGCTTAA
Upstream 100 bases:
>100_bases TTTATTGTTCATTATTAGTTGTTCACTAATATAAGCTTGTATTGACCTTTCAAATGATATATTATTTTATTAAGTATACT ACTCAAAGGATGGGATAGAA
Downstream 100 bases:
>100_bases AAAAGAGAGACTCCTATAAGTAGTCTCTCTAAAAATTTATCTATTTTTATCCTATGCCATTGTATATTACACCAAGTATA AGTACAAGTATAGATGATAT
Product: zinc metallohydrolase
Products: NA
Alternate protein names: Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Family Protein; Metallo-Beta-Lactamase Domain Protein; Hydrolase; Zinc Metallohydrolase; Beta-Lactamase-Like; Zn-Dependent Hydrolase Glyoxylase II Family; Metallo-Beta-Lactamase Superfamily Protein; Zinc-Dependent Hydrolase; Metallo-Beta-Lactamase; Zn-Dependent Hydrolase Including Glyoxylase; Zinc Metallohydrolase Glyoxalase II Family
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MELTKIKGSTYYINAPTNIGVYVFKNKNCLIIDTGINNTQARKIEEVLINNNLHPKYIINTHSHIDHCGGNNYFKNNYTG CLFYSSNKEKVYMENIELCFEMLSGSKPLKELIRTNKSINIDFVLDYGINKINDEKFEIISLKGHTKEQIGIITPEKVCF LGDSIFSCETMKKYSIPYLYDIEESINTLNIIKDIDADYFVLGHSENIIEKSDLNSLVDKNLDNIKNYINQILELLDQPL TKEDILQNLAILNDIPMNFTQYHVDLSTVGSFITYLYDKDYIDSSLQDGKLYFFKKA
Sequences:
>Translated_297_residues MELTKIKGSTYYINAPTNIGVYVFKNKNCLIIDTGINNTQARKIEEVLINNNLHPKYIINTHSHIDHCGGNNYFKNNYTG CLFYSSNKEKVYMENIELCFEMLSGSKPLKELIRTNKSINIDFVLDYGINKINDEKFEIISLKGHTKEQIGIITPEKVCF LGDSIFSCETMKKYSIPYLYDIEESINTLNIIKDIDADYFVLGHSENIIEKSDLNSLVDKNLDNIKNYINQILELLDQPL TKEDILQNLAILNDIPMNFTQYHVDLSTVGSFITYLYDKDYIDSSLQDGKLYFFKKA >Mature_297_residues MELTKIKGSTYYINAPTNIGVYVFKNKNCLIIDTGINNTQARKIEEVLINNNLHPKYIINTHSHIDHCGGNNYFKNNYTG CLFYSSNKEKVYMENIELCFEMLSGSKPLKELIRTNKSINIDFVLDYGINKINDEKFEIISLKGHTKEQIGIITPEKVCF LGDSIFSCETMKKYSIPYLYDIEESINTLNIIKDIDADYFVLGHSENIIEKSDLNSLVDKNLDNIKNYINQILELLDQPL TKEDILQNLAILNDIPMNFTQYHVDLSTVGSFITYLYDKDYIDSSLQDGKLYFFKKA
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34265; Mature: 34265
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELTKIKGSTYYINAPTNIGVYVFKNKNCLIIDTGINNTQARKIEEVLINNNLHPKYIIN CCCEEECCCEEEEECCCCEEEEEEECCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEE THSHIDHCGGNNYFKNNYTGCLFYSSNKEKVYMENIELCFEMLSGSKPLKELIRTNKSIN CCCCHHHCCCCCCCCCCCCEEEEECCCCCEEEHHHHHHHHHHHCCCHHHHHHHHCCCCCE IDFVLDYGINKINDEKFEIISLKGHTKEQIGIITPEKVCFLGDSIFSCETMKKYSIPYLY EEEEEECCCCCCCCCEEEEEEECCCCCHHEEEECCCCEEEECCCHHHHHHHHHCCCCEEE DIEESINTLNIIKDIDADYFVLGHSENIIEKSDLNSLVDKNLDNIKNYINQILELLDQPL EHHHCCCHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC TKEDILQNLAILNDIPMNFTQYHVDLSTVGSFITYLYDKDYIDSSLQDGKLYFFKKA CHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHCHHHHCCCCCCCEEEEEECC >Mature Secondary Structure MELTKIKGSTYYINAPTNIGVYVFKNKNCLIIDTGINNTQARKIEEVLINNNLHPKYIIN CCCEEECCCEEEEECCCCEEEEEEECCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEE THSHIDHCGGNNYFKNNYTGCLFYSSNKEKVYMENIELCFEMLSGSKPLKELIRTNKSIN CCCCHHHCCCCCCCCCCCCEEEEECCCCCEEEHHHHHHHHHHHCCCHHHHHHHHCCCCCE IDFVLDYGINKINDEKFEIISLKGHTKEQIGIITPEKVCFLGDSIFSCETMKKYSIPYLY EEEEEECCCCCCCCCEEEEEEECCCCCHHEEEECCCCEEEECCCHHHHHHHHHCCCCEEE DIEESINTLNIIKDIDADYFVLGHSENIIEKSDLNSLVDKNLDNIKNYINQILELLDQPL EHHHCCCHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC TKEDILQNLAILNDIPMNFTQYHVDLSTVGSFITYLYDKDYIDSSLQDGKLYFFKKA CHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHCHHHHCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA