| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28211305
Identifier: 28211305
GI number: 28211305
Start: 1763976
End: 1764383
Strand: Direct
Name: 28211305
Synonym: CTC01645
Alternate gene names: NA
Gene position: 1763976-1764383 (Clockwise)
Preceding gene: 28211299
Following gene: 28211307
Centisome position: 63.02
GC content: 26.96
Gene sequence:
>408_bases ATGGGATTTACTGATAAGTTAAATAAATACTATGCTGAAAACTATATTAAGAAATATGGAGATAGATTATCTCAAGTACA AGGAAACATCGTTTCCGTAAAAGTTGAAGAAAAAACTATTCTCTGGATTTTTCATAAAATAACAGCGGTTTTATTAGTTA AACCAGAAAGAAGTAAAAATATTGTAAGATGCGTGTATAAAAAGAAAAGATGGTTTAAAAAAATAGATTTTATACCACTA TCTCAAGGAAATTTTGTGTTAGTACAAGGACTTAAAGGGAAAAAAGGAAAAGAAAATAGAGAAGAAATAGAAATAATGAA CATAAGAAATCTTACAACTAAAAGAGATTTAATTCCTCTTGAAGAAGAACCAAAAGTTCAAAGGGTTAAACAAACTAGAT ACAAGTAG
Upstream 100 bases:
>100_bases AAAACTAAATATTACCATAGTATTAATATGTATTAATTTATATAATAATTTTTATTCAATGTGGAATCATAAATAAATAT ATTGCAAAGGAGTTATTTAT
Downstream 100 bases:
>100_bases TTACAAATGAATAATTAATGAGGTTCTTCCTCCTATCATCGGAAGAACTTTAATTTTATTTTGTAGACTCGTTAACATCA CTTGTTTTAGTGAAGAGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MGFTDKLNKYYAENYIKKYGDRLSQVQGNIVSVKVEEKTILWIFHKITAVLLVKPERSKNIVRCVYKKKRWFKKIDFIPL SQGNFVLVQGLKGKKGKENREEIEIMNIRNLTTKRDLIPLEEEPKVQRVKQTRYK
Sequences:
>Translated_135_residues MGFTDKLNKYYAENYIKKYGDRLSQVQGNIVSVKVEEKTILWIFHKITAVLLVKPERSKNIVRCVYKKKRWFKKIDFIPL SQGNFVLVQGLKGKKGKENREEIEIMNIRNLTTKRDLIPLEEEPKVQRVKQTRYK >Mature_134_residues GFTDKLNKYYAENYIKKYGDRLSQVQGNIVSVKVEEKTILWIFHKITAVLLVKPERSKNIVRCVYKKKRWFKKIDFIPLS QGNFVLVQGLKGKKGKENREEIEIMNIRNLTTKRDLIPLEEEPKVQRVKQTRYK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16073; Mature: 15942
Theoretical pI: Translated: 10.66; Mature: 10.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFTDKLNKYYAENYIKKYGDRLSQVQGNIVSVKVEEKTILWIFHKITAVLLVKPERSKN CCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEHHHHHHHEEEEECCCCCCH IVRCVYKKKRWFKKIDFIPLSQGNFVLVQGLKGKKGKENREEIEIMNIRNLTTKRDLIPL HHHHHHHHHHHHHHCCCEECCCCCEEEEECCCCCCCCCCCHHEEEEECCCCCCCCCCCCC EEEPKVQRVKQTRYK CCCCHHHHHHHHCCC >Mature Secondary Structure GFTDKLNKYYAENYIKKYGDRLSQVQGNIVSVKVEEKTILWIFHKITAVLLVKPERSKN CCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEHHHHHHHEEEEECCCCCCH IVRCVYKKKRWFKKIDFIPLSQGNFVLVQGLKGKKGKENREEIEIMNIRNLTTKRDLIPL HHHHHHHHHHHHHHCCCEECCCCCEEEEECCCCCCCCCCCHHEEEEECCCCCCCCCCCCC EEEPKVQRVKQTRYK CCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA