| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28211152
Identifier: 28211152
GI number: 28211152
Start: 1598678
End: 1599271
Strand: Direct
Name: 28211152
Synonym: CTC01476
Alternate gene names: NA
Gene position: 1598678-1599271 (Clockwise)
Preceding gene: 28211151
Following gene: 28211154
Centisome position: 57.11
GC content: 26.94
Gene sequence:
>594_bases ATGATTAAAAAAATTAGTGTAATACTAGCCCTAACAGGTGTTATTAATACTAATAGTGCACTATCAACACCACCAAGTAA AGTTAATGAACCTATAAAACCCAAAGCATCAGCTTCATATATGGAGATAGATGGATTAAAAGAATTAAAAGCTAAATCAG ATATCATAGTTGAAGTAGAAGGAACAGATAAGTTTGAATTAATAGATTATAAAGGTATAAAAATGAGAAAAACTACTGTG AAAATATTAGATGTTATGAAAGGAAATCCAACCCTTAAAGAAATAACAGTAGTACAAACAGAAGGGTTGGAAAGTGAAGA ACCTCCAATGAAAAATGAAAAACTATTGATGTTTTTAAGAAAAGGAATAGATATAACAGATTCCTATGTACCTATAGGAG GTAACCAAGGAATATACAAAATAATAACTAAAAAAACTAAGAAAAATAGTATGACACCTAAAAAATTACCACATCTTAAT GCTCCAAAGGACGATGCCATAAAAATTGTTACACCAACTTCATTAATAAACAATAAAATTTTAAGAGATTTAAATGGAAA TTATGATGATATAAAAAAGAAATTAATTGAATAA
Upstream 100 bases:
>100_bases AAATAGCATATCTTATGGATTTACTCCAGTAAATTATAGAACCATTACTGATGATGTTACTACTTTACTTAAAAATAGAT ATAATGAAGAGGTGAAATAA
Downstream 100 bases:
>100_bases AACAACAAACCTATAACTTTTTCTCAAGAATTACTCTCTTAAAAGTATCCAAAGGTTCTTCATTTTCTTTACTTACAATA TCTGGAGGTAGTCCAAATTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MIKKISVILALTGVINTNSALSTPPSKVNEPIKPKASASYMEIDGLKELKAKSDIIVEVEGTDKFELIDYKGIKMRKTTV KILDVMKGNPTLKEITVVQTEGLESEEPPMKNEKLLMFLRKGIDITDSYVPIGGNQGIYKIITKKTKKNSMTPKKLPHLN APKDDAIKIVTPTSLINNKILRDLNGNYDDIKKKLIE
Sequences:
>Translated_197_residues MIKKISVILALTGVINTNSALSTPPSKVNEPIKPKASASYMEIDGLKELKAKSDIIVEVEGTDKFELIDYKGIKMRKTTV KILDVMKGNPTLKEITVVQTEGLESEEPPMKNEKLLMFLRKGIDITDSYVPIGGNQGIYKIITKKTKKNSMTPKKLPHLN APKDDAIKIVTPTSLINNKILRDLNGNYDDIKKKLIE >Mature_197_residues MIKKISVILALTGVINTNSALSTPPSKVNEPIKPKASASYMEIDGLKELKAKSDIIVEVEGTDKFELIDYKGIKMRKTTV KILDVMKGNPTLKEITVVQTEGLESEEPPMKNEKLLMFLRKGIDITDSYVPIGGNQGIYKIITKKTKKNSMTPKKLPHLN APKDDAIKIVTPTSLINNKILRDLNGNYDDIKKKLIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21919; Mature: 21919
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKKISVILALTGVINTNSALSTPPSKVNEPIKPKASASYMEIDGLKELKAKSDIIVEVE CCCCEEEEEEEEECCCCCCCCCCCHHHCCCCCCCCCCCCEEECCCHHHHHCCCCEEEEEC GTDKFELIDYKGIKMRKTTVKILDVMKGNPTLKEITVVQTEGLESEEPPMKNEKLLMFLR CCCCEEEEECCCCEEEHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHH KGIDITDSYVPIGGNQGIYKIITKKTKKNSMTPKKLPHLNAPKDDAIKIVTPTSLINNKI CCCCCCCCEEEECCCCCEEEEEECHHCCCCCCHHHCCCCCCCCCCCEEEECCHHHHHHHH LRDLNGNYDDIKKKLIE HHHCCCCHHHHHHHHCC >Mature Secondary Structure MIKKISVILALTGVINTNSALSTPPSKVNEPIKPKASASYMEIDGLKELKAKSDIIVEVE CCCCEEEEEEEEECCCCCCCCCCCHHHCCCCCCCCCCCCEEECCCHHHHHCCCCEEEEEC GTDKFELIDYKGIKMRKTTVKILDVMKGNPTLKEITVVQTEGLESEEPPMKNEKLLMFLR CCCCEEEEECCCCEEEHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHH KGIDITDSYVPIGGNQGIYKIITKKTKKNSMTPKKLPHLNAPKDDAIKIVTPTSLINNKI CCCCCCCCEEEECCCCCEEEEEECHHCCCCCCHHHCCCCCCCCCCCEEEECCHHHHHHHH LRDLNGNYDDIKKKLIE HHHCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA