| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28211151
Identifier: 28211151
GI number: 28211151
Start: 1598120
End: 1598677
Strand: Direct
Name: 28211151
Synonym: CTC01475
Alternate gene names: NA
Gene position: 1598120-1598677 (Clockwise)
Preceding gene: 28211137
Following gene: 28211152
Centisome position: 57.09
GC content: 31.18
Gene sequence:
>558_bases ATGATTAAAACTAAAAAGAAAGTGTTTGCAAATGTATCTTTCACAGTTCTATTATTGGTACTAATTAATACAAGTGTATT TGCAGCATATCCATCTAAAGCAACAATGGACAATACTTGGGGTTTTGAAAAAGGAGACAGCACAGAAAAACAATTAATAT ACCATCAACATGGTGATCTTGATTGGAAAGGTCATGTGGATTTTGCAATGAATGAAATAAATATTAATCCAGCTGATATA TCTTGTTATTATGGAACTTCTGAGGATTTAGCTAATATAGTTGTTACATCTAATTATTGGCCTGATGCTACATGGTCTGG TTCTACTTATGCACCTATAGGTTTAGAACCAAAAACTATTGAATTAAATTCATCTGCAGAGCTTACAGATTGGCAAAGAG ATGCCGTTACAACTCATGAATTTGTTCACATATGGGGAATAAATGATTCCAGGAACAAAAATAGCATATCTTATGGATTT ACTCCAGTAAATTATAGAACCATTACTGATGATGTTACTACTTTACTTAAAAATAGATATAATGAAGAGGTGAAATAA
Upstream 100 bases:
>100_bases TTTATTTAGAATACTGTGAAGTCATATAATTACATAGTTTGAAACAAATTAATTATCATAGTATAATAGTAATTAATTAC AATTATAGGGGGGATTTCTA
Downstream 100 bases:
>100_bases ATGATTAAAAAAATTAGTGTAATACTAGCCCTAACAGGTGTTATTAATACTAATAGTGCACTATCAACACCACCAAGTAA AGTTAATGAACCTATAAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MIKTKKKVFANVSFTVLLLVLINTSVFAAYPSKATMDNTWGFEKGDSTEKQLIYHQHGDLDWKGHVDFAMNEININPADI SCYYGTSEDLANIVVTSNYWPDATWSGSTYAPIGLEPKTIELNSSAELTDWQRDAVTTHEFVHIWGINDSRNKNSISYGF TPVNYRTITDDVTTLLKNRYNEEVK
Sequences:
>Translated_185_residues MIKTKKKVFANVSFTVLLLVLINTSVFAAYPSKATMDNTWGFEKGDSTEKQLIYHQHGDLDWKGHVDFAMNEININPADI SCYYGTSEDLANIVVTSNYWPDATWSGSTYAPIGLEPKTIELNSSAELTDWQRDAVTTHEFVHIWGINDSRNKNSISYGF TPVNYRTITDDVTTLLKNRYNEEVK >Mature_185_residues MIKTKKKVFANVSFTVLLLVLINTSVFAAYPSKATMDNTWGFEKGDSTEKQLIYHQHGDLDWKGHVDFAMNEININPADI SCYYGTSEDLANIVVTSNYWPDATWSGSTYAPIGLEPKTIELNSSAELTDWQRDAVTTHEFVHIWGINDSRNKNSISYGF TPVNYRTITDDVTTLLKNRYNEEVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20999; Mature: 20999
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKTKKKVFANVSFTVLLLVLINTSVFAAYPSKATMDNTWGFEKGDSTEKQLIYHQHGDL CCCCCCHHHCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCC DWKGHVDFAMNEININPADISCYYGTSEDLANIVVTSNYWPDATWSGSTYAPIGLEPKTI CCCCCEEEEEEEEECCCCEEEEEECCCHHCEEEEEECCCCCCCCCCCCEECCCCCCCCEE ELNSSAELTDWQRDAVTTHEFVHIWGINDSRNKNSISYGFTPVNYRTITDDVTTLLKNRY EECCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEECCCCCCEEEEHHHHHHHHHHHC NEEVK CCCCC >Mature Secondary Structure MIKTKKKVFANVSFTVLLLVLINTSVFAAYPSKATMDNTWGFEKGDSTEKQLIYHQHGDL CCCCCCHHHCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCC DWKGHVDFAMNEININPADISCYYGTSEDLANIVVTSNYWPDATWSGSTYAPIGLEPKTI CCCCCEEEEEEEEECCCCEEEEEECCCHHCEEEEEECCCCCCCCCCCCEECCCCCCCCEE ELNSSAELTDWQRDAVTTHEFVHIWGINDSRNKNSISYGFTPVNYRTITDDVTTLLKNRY EECCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEECCCCCCEEEEHHHHHHHHHHHC NEEVK CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA