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The map label for this gene is 28211107

Identifier: 28211107

GI number: 28211107

Start: 1543416

End: 1544165

Strand: Direct

Name: 28211107

Synonym: CTC01430

Alternate gene names: NA

Gene position: 1543416-1544165 (Clockwise)

Preceding gene: 28211102

Following gene: 28211108

Centisome position: 55.14

GC content: 29.73

Gene sequence:

>750_bases
TTGGAGGTGCAACAAATGGACTTAACAAAATGTAACCAATATTTAAGATATATTGAATTATGCAGAGAAAAAATACAGTC
ATTTTCTCAATATCCATATTGCTTATCAGCAATAAAAAATTTATCTAAAATAGAGTTTCATCCTAAAGTAACATATATTG
TAGGTGAAAATGGTACTGGCAAATCAACAATACTTGAAGCCATTGCAATAGCTTGTGGATTTAATCCAGAAGGTGGAACT
AGAAATATTAACTTTTCAACAAATGATACCCATTCAGATTTACATAAAAATCTTAAATTGGTTAGAGGAGTTAAAAGACC
ATATGATGGATTTTTTCTAAGAGCAGAAAGCTTCTATAATGTAGCCACAAATATAGACGAAGTGGATGCTTTGGGCTCCT
ATGGAGGAGTATCACTACATTCACAGTCTCATGGAGAATCTTTTTTATCAGTTATTAGAAATAGATTTAACGGAAATGGT
TTATATATTTTGGATGAGCCAGAAGCAGCATTATCGCCATCAAGGCAAATGTCTATGCTTGTTATAATGCATGAATTAAT
ACAGAAAAATTGTCAATTTATAATAGCTACTCATTCTCCTATAATAATGTCTTATCCTAATTCAATCATTTATGAATTAG
GCAATGGTATAAAAGAGGTTATGTACAAGGATACTGAACATTATACAATTACGAGAAATTTTCTTGATAAACTTGAAAAA
ATGCTAAAAATACTTTTATCTGAAGATTAA

Upstream 100 bases:

>100_bases
AATACGGTGTTAACACTCTTGAAGATATGCTATGATTATTTCAGAAGTGTAACACCTTGTTGCTACTAATTTTTTGGTTT
AATTATTATCCATATCACTT

Downstream 100 bases:

>100_bases
ACAATATCACCAAAATTCATTAATATACATTTAAATAAGATGATGTATACAAATGTGAACTTTTAATATGATGATGACCT
TGATGGCTTTCTTTATAAGG

Product: transporter

Products: NA

Alternate protein names: SMC Domain-Containing Protein; ABC Transporter; SMC Domain Protein; ATPase; Aaa ATPase; RecF/RecN/SMC; ABC-Type Antimicrobial Peptide Transport System Protein; LOW QUALITY PROTEIN ABC Transporter; SMC Protein-Like Protein; ABC Transport System ATPase Component

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MEVQQMDLTKCNQYLRYIELCREKIQSFSQYPYCLSAIKNLSKIEFHPKVTYIVGENGTGKSTILEAIAIACGFNPEGGT
RNINFSTNDTHSDLHKNLKLVRGVKRPYDGFFLRAESFYNVATNIDEVDALGSYGGVSLHSQSHGESFLSVIRNRFNGNG
LYILDEPEAALSPSRQMSMLVIMHELIQKNCQFIIATHSPIIMSYPNSIIYELGNGIKEVMYKDTEHYTITRNFLDKLEK
MLKILLSED

Sequences:

>Translated_249_residues
MEVQQMDLTKCNQYLRYIELCREKIQSFSQYPYCLSAIKNLSKIEFHPKVTYIVGENGTGKSTILEAIAIACGFNPEGGT
RNINFSTNDTHSDLHKNLKLVRGVKRPYDGFFLRAESFYNVATNIDEVDALGSYGGVSLHSQSHGESFLSVIRNRFNGNG
LYILDEPEAALSPSRQMSMLVIMHELIQKNCQFIIATHSPIIMSYPNSIIYELGNGIKEVMYKDTEHYTITRNFLDKLEK
MLKILLSED
>Mature_249_residues
MEVQQMDLTKCNQYLRYIELCREKIQSFSQYPYCLSAIKNLSKIEFHPKVTYIVGENGTGKSTILEAIAIACGFNPEGGT
RNINFSTNDTHSDLHKNLKLVRGVKRPYDGFFLRAESFYNVATNIDEVDALGSYGGVSLHSQSHGESFLSVIRNRFNGNG
LYILDEPEAALSPSRQMSMLVIMHELIQKNCQFIIATHSPIIMSYPNSIIYELGNGIKEVMYKDTEHYTITRNFLDKLEK
MLKILLSED

Specific function: Unknown

COG id: COG3910

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28325; Mature: 28325

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVQQMDLTKCNQYLRYIELCREKIQSFSQYPYCLSAIKNLSKIEFHPKVTYIVGENGTG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEECCCEEEEECCCCCC
KSTILEAIAIACGFNPEGGTRNINFSTNDTHSDLHKNLKLVRGVKRPYDGFFLRAESFYN
HHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEHHHHHH
VATNIDEVDALGSYGGVSLHSQSHGESFLSVIRNRFNGNGLYILDEPEAALSPSRQMSML
HHCCHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHCCCCCEEEEECCHHHHCCHHHHHHH
VIMHELIQKNCQFIIATHSPIIMSYPNSIIYELGNGIKEVMYKDTEHYTITRNFLDKLEK
HHHHHHHHCCCCEEEEECCCEEEECCHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHH
MLKILLSED
HHHHHHCCC
>Mature Secondary Structure
MEVQQMDLTKCNQYLRYIELCREKIQSFSQYPYCLSAIKNLSKIEFHPKVTYIVGENGTG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEECCCEEEEECCCCCC
KSTILEAIAIACGFNPEGGTRNINFSTNDTHSDLHKNLKLVRGVKRPYDGFFLRAESFYN
HHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEHHHHHH
VATNIDEVDALGSYGGVSLHSQSHGESFLSVIRNRFNGNGLYILDEPEAALSPSRQMSML
HHCCHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHCCCCCEEEEECCHHHHCCHHHHHHH
VIMHELIQKNCQFIIATHSPIIMSYPNSIIYELGNGIKEVMYKDTEHYTITRNFLDKLEK
HHHHHHHHCCCCEEEEECCCEEEECCHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHH
MLKILLSED
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA