| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is yisY [H]
Identifier: 28210843
GI number: 28210843
Start: 1221805
End: 1222617
Strand: Direct
Name: yisY [H]
Synonym: CTC01150
Alternate gene names: 28210843
Gene position: 1221805-1222617 (Clockwise)
Preceding gene: 28210842
Following gene: 28210844
Centisome position: 43.65
GC content: 33.83
Gene sequence:
>813_bases ATGGGATACTATGTTAGAGTAGAGCCCAATGTAAAAATTTATGTAGAAGATCTTAATCCCACAGGTGATAAGACAATTGT ATTTTTACATGGTTGGCCTGGAAGTCATAAATTATTTGAATATCAGTTTAATGAGCTTCCTAAAAGAGGATACAGATGTA TAGGAGTAGATCAAAGGGGATTTGGTCAATCAGATAAGCCATGGAGAGGATACGATTATAATCGTTTAGCTGATGATGTT AGATGTATAGTTGAAACGCTCAAATTACAAGATTTTATACTTGCAGGTCACTCAACAGGTGGGGCAATTGCTATTAGATA TATGGCTAGACATAATGGATATAAGGTATCAAAACTTGCTCTTTTTGCAGCGGCAGCTCCTAGTCTTATCAAACGTCCTA ATTTCCCTTATGGTTTAGATAAAGAAACTGTGATGAAAATTATTGAAGGAACATATACTGATCGTCCTAAAATGTTAAGG GACTTTGGTGATATATTTTTCTTTCAACATATAACTGAACCATTTAATTATTGGTTTTTACAATTAGGATTACAAGCAGC AGGATGGGCAACTGCTGATATTGCAAAGACTTGGTTACGTGAAGAACTATTTTGTGATTTAGGGACAATAACTGTTCCAA CATTAATTATGCATGGCATTCACGACAAAGTTGTTCCATTCGAATTAGGTAAAATACAAAAACAAGGCATTAAAAACTCA AAACTTATACCATTTGAATATAGCGGTCACGGATTGTTCTATGACCAACGAGAGAAATTTAATGGAGAATTAAGGAGTTT TATTGAAGAATAA
Upstream 100 bases:
>100_bases AAAAGGAATAGTATAAGAAATATTATTATTAATAATTCATAAATCCATTTTTAAGTGAATAATATGTCAATATAACCATT TAATCATTGGAGGTATTTCG
Downstream 100 bases:
>100_bases AGTTTTTACAAGATAGAACTTGCTAATAAAAGCGTTAGAAATCAATAGTTTATTGTGCATTTTTATTCGGATATAAAACA ACATTTATACACAATTATCA
Product: non-heme chloroperoxidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MGYYVRVEPNVKIYVEDLNPTGDKTIVFLHGWPGSHKLFEYQFNELPKRGYRCIGVDQRGFGQSDKPWRGYDYNRLADDV RCIVETLKLQDFILAGHSTGGAIAIRYMARHNGYKVSKLALFAAAAPSLIKRPNFPYGLDKETVMKIIEGTYTDRPKMLR DFGDIFFFQHITEPFNYWFLQLGLQAAGWATADIAKTWLREELFCDLGTITVPTLIMHGIHDKVVPFELGKIQKQGIKNS KLIPFEYSGHGLFYDQREKFNGELRSFIEE
Sequences:
>Translated_270_residues MGYYVRVEPNVKIYVEDLNPTGDKTIVFLHGWPGSHKLFEYQFNELPKRGYRCIGVDQRGFGQSDKPWRGYDYNRLADDV RCIVETLKLQDFILAGHSTGGAIAIRYMARHNGYKVSKLALFAAAAPSLIKRPNFPYGLDKETVMKIIEGTYTDRPKMLR DFGDIFFFQHITEPFNYWFLQLGLQAAGWATADIAKTWLREELFCDLGTITVPTLIMHGIHDKVVPFELGKIQKQGIKNS KLIPFEYSGHGLFYDQREKFNGELRSFIEE >Mature_269_residues GYYVRVEPNVKIYVEDLNPTGDKTIVFLHGWPGSHKLFEYQFNELPKRGYRCIGVDQRGFGQSDKPWRGYDYNRLADDVR CIVETLKLQDFILAGHSTGGAIAIRYMARHNGYKVSKLALFAAAAPSLIKRPNFPYGLDKETVMKIIEGTYTDRPKMLRD FGDIFFFQHITEPFNYWFLQLGLQAAGWATADIAKTWLREELFCDLGTITVPTLIMHGIHDKVVPFELGKIQKQGIKNSK LIPFEYSGHGLFYDQREKFNGELRSFIEE
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR000639 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: NA
Molecular weight: Translated: 31120; Mature: 30989
Theoretical pI: Translated: 8.41; Mature: 8.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGYYVRVEPNVKIYVEDLNPTGDKTIVFLHGWPGSHKLFEYQFNELPKRGYRCIGVDQRG CCEEEEECCCEEEEEEECCCCCCEEEEEEECCCCCCCCEEEHHHHCCCCCCEEEECCCCC FGQSDKPWRGYDYNRLADDVRCIVETLKLQDFILAGHSTGGAIAIRYMARHNGYKVSKLA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEEEHHCCCCCHHHHH LFAAAAPSLIKRPNFPYGLDKETVMKIIEGTYTDRPKMLRDFGDIFFFQHITEPFNYWFL HHHHHCHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH QLGLQAAGWATADIAKTWLREELFCDLGTITVPTLIMHGIHDKVVPFELGKIQKQGIKNS HHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCC KLIPFEYSGHGLFYDQREKFNGELRSFIEE CEEEEEECCCCCEECCHHHHCHHHHHHHCC >Mature Secondary Structure GYYVRVEPNVKIYVEDLNPTGDKTIVFLHGWPGSHKLFEYQFNELPKRGYRCIGVDQRG CEEEEECCCEEEEEEECCCCCCEEEEEEECCCCCCCCEEEHHHHCCCCCCEEEECCCCC FGQSDKPWRGYDYNRLADDVRCIVETLKLQDFILAGHSTGGAIAIRYMARHNGYKVSKLA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEEEHHCCCCCHHHHH LFAAAAPSLIKRPNFPYGLDKETVMKIIEGTYTDRPKMLRDFGDIFFFQHITEPFNYWFL HHHHHCHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH QLGLQAAGWATADIAKTWLREELFCDLGTITVPTLIMHGIHDKVVPFELGKIQKQGIKNS HHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCC KLIPFEYSGHGLFYDQREKFNGELRSFIEE CEEEEEECCCCCEECCHHHHCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9353931; 9384377 [H]