Definition Clostridium tetani E88 chromosome, complete genome.
Accession NC_004557
Length 2,799,251

Click here to switch to the map view.

The map label for this gene is 28210842

Identifier: 28210842

GI number: 28210842

Start: 1219614

End: 1221578

Strand: Direct

Name: 28210842

Synonym: CTC01149

Alternate gene names: NA

Gene position: 1219614-1221578 (Clockwise)

Preceding gene: 28210841

Following gene: 28210843

Centisome position: 43.57

GC content: 27.79

Gene sequence:

>1965_bases
TTGATGAGGTATGATATGGATTTTAATGAAACAATATATAATAGAATATTAAAATTTGTTAAGGAGAATCCCGATAGTGT
TTATTTGCCACAGGATTTTGATGAAGCGGGAAAGAAAGATGCATATTTTATTTTTAATGCGAAATGCGGAACGGAAAAAT
TTGAAATTGAAAATAGCAATAATTTAATTAAGCTTATATCAAATTATTTAAATGATGAAGCTCAATATAATGATTTAATA
GAGTATATTCATGAGTTTCCAATAATAGTATATTATTTTGAGTTTTGTAGAATACTTGAAATGCAAATTAAGGAAAGCTT
GTTAAGTAGGAAAAAGGTCATAGAGGTAGGAAAAAAATTTGTCACCGAAAGTAATGATAACGAACAGATAAAGCTTGGCA
TTGCTTTACTAGGGTTATCTGCAGATATACAAACAAAGACCATATTAGAAACTATTGCACTACATAATGAATTTACATTT
TATGTAGTGGTATCAATGAAACATTGGAATCATTACAATTCATTTGTTTTTGAGCTTGCACAAAAGACAAAGGGGTATGG
CAAATTGCACTGTGTGAAAAACTTAGAACCAATTAATGATGAAATGAAAACCTGGTTTATAGAAGAGAGTTGTAATAATA
CTGTTTTTAAAAGTTTAAGTGCAATAATGTGTGTAGATAAAGTAGATATGAGTTGGTATCTCAAAACTAGGAAAATTACT
AAAATTGAATTTTCAAATATTTCTAGATTGATTTACTATATATTTTCAGTAGATGAAAATGATATCTATGAATTAGAAGA
TAGTTTAGAGACAGTAGAATTTTATTTGAAATATGCAGAAAAATATGCAGAAAATTTTAGGGATTTATGTGCTATTGTTT
ATATAAAAAGATGGATGAGACCTTATTGGGAACAATTTAATGTGGATATAGAGAAGAAAAATGGATGGACAAGCAATATT
GAGAGCAAGGTAGGAGATATTTGTAAGAACTTACTAAAAGATAAGAAATGGATACCGGTTTTAAAATCAGCAATATACAA
TGCAGAAGAGGATGTAGAAATATATACACGTATAGCAGAATCAATTGGTTTTGATCTAACTTTTAATATGTTAGATTCAG
TTTTGAAAAAAGATAAATTTAATATAGAAGTGTTTTATTTTCTATATACAAAGGATGATGAAGGCGATATAAAAAATGTT
ATTGATTATGCAAAAAATACACTGCCATACCAAGTTATATTTTCAGGTTCAGAGGAGATAAATGAAGATAATTTAACCGT
GGAGAATAAACCAGATATATGTTTCCTTTATATTTTAAAATATTTAAATAATTGCAATTATATAGAATTTGAATTGCCTA
CTATGGCATTACAAGCAAGATTTCAAAAATGTAGGGAAGAGGCAATAAAATATTTAAGGAATAATAAAGAACATTGGAAT
GAAAAAATTGTTTGTAAGATTAGAGAGGCTATTGAAGTTGAGGTGAATGACAAGCTTTTAAGAAAATTAAAAAGGCTTAT
TGGTGAAGAGGTCATAGATAAAAAGAAACAGAGAAAATATGTTGACATTAGTAAACAAAGATTAAAACCTCATATAAAAG
ATATTTACTTATTTTCCACATATGTAGCTGGTGTATATTATAGGGACACTTCCGTTGTTGAAGACTACATAGGCGTTAAT
GATATATTGTTTTTAAAAGAAGAACCAGAAAATCCATACGATAAAAATGCTATACTTGTTACAAATGAAAATGGTTATGT
CCTTGGTTATTTACCCAAAAGTGTAAACAAAATTCCTAAGAATTTACTTGCAGGAGGTAAGTTCTTATATACAATAATAG
AAGAGTATTCGCTAGAAAGCAATACAATATCAATTGATGTGTATCTAAGTTATAAGGACGTAATTGACCTAGTGGAGGAA
TTGATGAAGATCTCGGAATCAAAAGTAAATTACTATAAGCAGTAA

Upstream 100 bases:

>100_bases
CATATTGGAATATAAATTGACTGTAACTATAGTATAAATAGGTAAATAGGGACGGTTAATGAATTTTTCAAAAGTATGAT
ATAATAAAAACATAATTTAC

Downstream 100 bases:

>100_bases
TTTTCAGTTTAAATAAATAAAGGGACGGTTAATGAAAAACCACTATTATTATGATGATTTTTCATTAACCGTTCCTATTT
TTCCCTGAAGAGTTTAAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 654; Mature: 654

Protein sequence:

>654_residues
MMRYDMDFNETIYNRILKFVKENPDSVYLPQDFDEAGKKDAYFIFNAKCGTEKFEIENSNNLIKLISNYLNDEAQYNDLI
EYIHEFPIIVYYFEFCRILEMQIKESLLSRKKVIEVGKKFVTESNDNEQIKLGIALLGLSADIQTKTILETIALHNEFTF
YVVVSMKHWNHYNSFVFELAQKTKGYGKLHCVKNLEPINDEMKTWFIEESCNNTVFKSLSAIMCVDKVDMSWYLKTRKIT
KIEFSNISRLIYYIFSVDENDIYELEDSLETVEFYLKYAEKYAENFRDLCAIVYIKRWMRPYWEQFNVDIEKKNGWTSNI
ESKVGDICKNLLKDKKWIPVLKSAIYNAEEDVEIYTRIAESIGFDLTFNMLDSVLKKDKFNIEVFYFLYTKDDEGDIKNV
IDYAKNTLPYQVIFSGSEEINEDNLTVENKPDICFLYILKYLNNCNYIEFELPTMALQARFQKCREEAIKYLRNNKEHWN
EKIVCKIREAIEVEVNDKLLRKLKRLIGEEVIDKKKQRKYVDISKQRLKPHIKDIYLFSTYVAGVYYRDTSVVEDYIGVN
DILFLKEEPENPYDKNAILVTNENGYVLGYLPKSVNKIPKNLLAGGKFLYTIIEEYSLESNTISIDVYLSYKDVIDLVEE
LMKISESKVNYYKQ

Sequences:

>Translated_654_residues
MMRYDMDFNETIYNRILKFVKENPDSVYLPQDFDEAGKKDAYFIFNAKCGTEKFEIENSNNLIKLISNYLNDEAQYNDLI
EYIHEFPIIVYYFEFCRILEMQIKESLLSRKKVIEVGKKFVTESNDNEQIKLGIALLGLSADIQTKTILETIALHNEFTF
YVVVSMKHWNHYNSFVFELAQKTKGYGKLHCVKNLEPINDEMKTWFIEESCNNTVFKSLSAIMCVDKVDMSWYLKTRKIT
KIEFSNISRLIYYIFSVDENDIYELEDSLETVEFYLKYAEKYAENFRDLCAIVYIKRWMRPYWEQFNVDIEKKNGWTSNI
ESKVGDICKNLLKDKKWIPVLKSAIYNAEEDVEIYTRIAESIGFDLTFNMLDSVLKKDKFNIEVFYFLYTKDDEGDIKNV
IDYAKNTLPYQVIFSGSEEINEDNLTVENKPDICFLYILKYLNNCNYIEFELPTMALQARFQKCREEAIKYLRNNKEHWN
EKIVCKIREAIEVEVNDKLLRKLKRLIGEEVIDKKKQRKYVDISKQRLKPHIKDIYLFSTYVAGVYYRDTSVVEDYIGVN
DILFLKEEPENPYDKNAILVTNENGYVLGYLPKSVNKIPKNLLAGGKFLYTIIEEYSLESNTISIDVYLSYKDVIDLVEE
LMKISESKVNYYKQ
>Mature_654_residues
MMRYDMDFNETIYNRILKFVKENPDSVYLPQDFDEAGKKDAYFIFNAKCGTEKFEIENSNNLIKLISNYLNDEAQYNDLI
EYIHEFPIIVYYFEFCRILEMQIKESLLSRKKVIEVGKKFVTESNDNEQIKLGIALLGLSADIQTKTILETIALHNEFTF
YVVVSMKHWNHYNSFVFELAQKTKGYGKLHCVKNLEPINDEMKTWFIEESCNNTVFKSLSAIMCVDKVDMSWYLKTRKIT
KIEFSNISRLIYYIFSVDENDIYELEDSLETVEFYLKYAEKYAENFRDLCAIVYIKRWMRPYWEQFNVDIEKKNGWTSNI
ESKVGDICKNLLKDKKWIPVLKSAIYNAEEDVEIYTRIAESIGFDLTFNMLDSVLKKDKFNIEVFYFLYTKDDEGDIKNV
IDYAKNTLPYQVIFSGSEEINEDNLTVENKPDICFLYILKYLNNCNYIEFELPTMALQARFQKCREEAIKYLRNNKEHWN
EKIVCKIREAIEVEVNDKLLRKLKRLIGEEVIDKKKQRKYVDISKQRLKPHIKDIYLFSTYVAGVYYRDTSVVEDYIGVN
DILFLKEEPENPYDKNAILVTNENGYVLGYLPKSVNKIPKNLLAGGKFLYTIIEEYSLESNTISIDVYLSYKDVIDLVEE
LMKISESKVNYYKQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 77469; Mature: 77469

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRYDMDFNETIYNRILKFVKENPDSVYLPQDFDEAGKKDAYFIFNAKCGTEKFEIENSN
CCEECCCCCHHHHHHHHHHHHCCCCEEECCCCHHHCCCCCEEEEEECCCCCCEEEEECCC
NLIKLISNYLNDEAQYNDLIEYIHEFPIIVYYFEFCRILEMQIKESLLSRKKVIEVGKKF
CHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTESNDNEQIKLGIALLGLSADIQTKTILETIALHNEFTFYVVVSMKHWNHYNSFVFELA
HCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEEEEECCCHHHHHHHHHH
QKTKGYGKLHCVKNLEPINDEMKTWFIEESCNNTVFKSLSAIMCVDKVDMSWYLKTRKIT
HHCCCCCEEEEECCCCCCCCHHHHEEEHHHCCHHHHHHHHHHHHHHHCCCEEEEEECEEE
KIEFSNISRLIYYIFSVDENDIYELEDSLETVEFYLKYAEKYAENFRDLCAIVYIKRWMR
EEEHHHHHEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PYWEQFNVDIEKKNGWTSNIESKVGDICKNLLKDKKWIPVLKSAIYNAEEDVEIYTRIAE
HHHHHHCCEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHH
SIGFDLTFNMLDSVLKKDKFNIEVFYFLYTKDDEGDIKNVIDYAKNTLPYQVIFSGSEEI
HHCCCEEHHHHHHHHCCCCCCEEEEEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCC
NEDNLTVENKPDICFLYILKYLNNCNYIEFELPTMALQARFQKCREEAIKYLRNNKEHWN
CCCCCEECCCCCCHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCHHHHC
EKIVCKIREAIEVEVNDKLLRKLKRLIGEEVIDKKKQRKYVDISKQRLKPHIKDIYLFST
HHHHHEEHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHH
YVAGVYYRDTSVVEDYIGVNDILFLKEEPENPYDKNAILVTNENGYVLGYLPKSVNKIPK
HHHEEEECCHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEECCCCEEEEECCHHHHHHHH
NLLAGGKFLYTIIEEYSLESNTISIDVYLSYKDVIDLVEELMKISESKVNYYKQ
HHHCCCHHHHHHHHHHCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMRYDMDFNETIYNRILKFVKENPDSVYLPQDFDEAGKKDAYFIFNAKCGTEKFEIENSN
CCEECCCCCHHHHHHHHHHHHCCCCEEECCCCHHHCCCCCEEEEEECCCCCCEEEEECCC
NLIKLISNYLNDEAQYNDLIEYIHEFPIIVYYFEFCRILEMQIKESLLSRKKVIEVGKKF
CHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTESNDNEQIKLGIALLGLSADIQTKTILETIALHNEFTFYVVVSMKHWNHYNSFVFELA
HCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEEEEECCCHHHHHHHHHH
QKTKGYGKLHCVKNLEPINDEMKTWFIEESCNNTVFKSLSAIMCVDKVDMSWYLKTRKIT
HHCCCCCEEEEECCCCCCCCHHHHEEEHHHCCHHHHHHHHHHHHHHHCCCEEEEEECEEE
KIEFSNISRLIYYIFSVDENDIYELEDSLETVEFYLKYAEKYAENFRDLCAIVYIKRWMR
EEEHHHHHEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PYWEQFNVDIEKKNGWTSNIESKVGDICKNLLKDKKWIPVLKSAIYNAEEDVEIYTRIAE
HHHHHHCCEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHH
SIGFDLTFNMLDSVLKKDKFNIEVFYFLYTKDDEGDIKNVIDYAKNTLPYQVIFSGSEEI
HHCCCEEHHHHHHHHCCCCCCEEEEEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCC
NEDNLTVENKPDICFLYILKYLNNCNYIEFELPTMALQARFQKCREEAIKYLRNNKEHWN
CCCCCEECCCCCCHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCHHHHC
EKIVCKIREAIEVEVNDKLLRKLKRLIGEEVIDKKKQRKYVDISKQRLKPHIKDIYLFST
HHHHHEEHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHH
YVAGVYYRDTSVVEDYIGVNDILFLKEEPENPYDKNAILVTNENGYVLGYLPKSVNKIPK
HHHEEEECCHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEECCCCEEEEECCHHHHHHHH
NLLAGGKFLYTIIEEYSLESNTISIDVYLSYKDVIDLVEELMKISESKVNYYKQ
HHHCCCHHHHHHHHHHCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA