| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28210836
Identifier: 28210836
GI number: 28210836
Start: 1209608
End: 1210951
Strand: Direct
Name: 28210836
Synonym: CTC01143
Alternate gene names: NA
Gene position: 1209608-1210951 (Clockwise)
Preceding gene: 28210835
Following gene: 28210837
Centisome position: 43.21
GC content: 24.26
Gene sequence:
>1344_bases ATGAAGACAAGCATACAAAATGAAAAATATGATACTATGCTAGAACCATCAGATTGGAGATTTTCAGCAACTATAGTAGG ACTTTTACAATATTTAAATTATCATGATTTAGATTATAAACTGGAAGAAGATTATATTTTGTATAATAGTTCTGGTATTA ATGAAGAGAGATATTTAGACTTTGTAGAATATAAGTATGGAGAAGAACTCCACCATAGATTAGTTGAAAATATACTTTCT AACGAAGAAATAACAGAGGAGCAATTAAAGCTAATAAATGAAAAGTTAGTAGCAAATACCATAATGAAAAAGACCTTTGG CAAAATAAAGTTTGACAATACAAATAAAAAAGAAATATTAGATATTATTAATAAAAATAGATATGAATTAATAAGGGAAA CCTTCAGAAGAAAAAGTAATATGTATGCTAATTATGGAAATACAAATCAGTTGTTTAATGATTCGCAAGATCATTGTAGG TTACTAGGATATTGTATAGATACAGGTAAAAAGGGGAAATCAACAGGTTTTAATTTTATGATGAGCACATTTGTTGGATC TGATATAAAAGAATTTGATTTTATTCCATTTGCTTTTGAGGGGAGTAGAGAGGCTTTTTTTATAAATGATAATTACACAA TACAAAGACTAAAAATCTCCAACGAAATTTTAAGTAAAAAGATAGAGGATGATTTAGAAGGAGAAAATAAAAGAAAAGAT GCAAGACAAACTTTGTTTAAAGCTATTATGGAAACATCAGATTTTATAAAAAGAGATGTAGAGGTAATATTAAAAGATAT ATCTAAAGAGTATTTTGAAACTTTATACATAAGAAAAGAAAGTATAGATATATTTAAAGAATTCATAAATGAAAAAATAG AATATAAGTCCTTTTGTTTTTCTCATAAAGTAACAGATAAATACTATATAAATATACAAAAAAAAGTCACAGAAAGTATT TTAAACAATGTGTTATTAGATGAATTAATAGAAATTTTTTTAAAAGAAAAAAATAGAAGTTACTTAGTATTACAATTAAT AAAAATTAATGTATTAATAAGGAGGGATAAAACAATGAAAGATAGATTAAAAGGTGCTTTTGCTTGTGCAAAGCAAGTAT CAAAAGCTATAGAAAGTAATAAATTAGATAGCTATAAACAAAAGCTTACAAGTTCAATAATATTTAAAGATTATGATAGA GTATGTCAAATATTACTACAACTATCAAACTACTCAGGAATAGAGTTTGGATTTGTATATGATTTATATGATGATTTTGA AGAAAACAAAGACTTAGCATATACATTTATTAATGCATTATCAAAGAAAAGTGAAAATAACTAA
Upstream 100 bases:
>100_bases TGCAACATTTTTATGATGTAGGCATAGGAAGCCGTAAATCAATGGGATTTGGAATGATAGATTTAGTAACACAAGATTTA CTATAAGAAAGGAGGAAATT
Downstream 100 bases:
>100_bases TAAGAGGTGGAAAAAATGAAAGATAAAAAAGCATTAACTTTAACAGTAGTAGCAAATATGACTTCAAACTATTCAGAAGG ATTAGGGAATATAGCAAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 447; Mature: 447
Protein sequence:
>447_residues MKTSIQNEKYDTMLEPSDWRFSATIVGLLQYLNYHDLDYKLEEDYILYNSSGINEERYLDFVEYKYGEELHHRLVENILS NEEITEEQLKLINEKLVANTIMKKTFGKIKFDNTNKKEILDIINKNRYELIRETFRRKSNMYANYGNTNQLFNDSQDHCR LLGYCIDTGKKGKSTGFNFMMSTFVGSDIKEFDFIPFAFEGSREAFFINDNYTIQRLKISNEILSKKIEDDLEGENKRKD ARQTLFKAIMETSDFIKRDVEVILKDISKEYFETLYIRKESIDIFKEFINEKIEYKSFCFSHKVTDKYYINIQKKVTESI LNNVLLDELIEIFLKEKNRSYLVLQLIKINVLIRRDKTMKDRLKGAFACAKQVSKAIESNKLDSYKQKLTSSIIFKDYDR VCQILLQLSNYSGIEFGFVYDLYDDFEENKDLAYTFINALSKKSENN
Sequences:
>Translated_447_residues MKTSIQNEKYDTMLEPSDWRFSATIVGLLQYLNYHDLDYKLEEDYILYNSSGINEERYLDFVEYKYGEELHHRLVENILS NEEITEEQLKLINEKLVANTIMKKTFGKIKFDNTNKKEILDIINKNRYELIRETFRRKSNMYANYGNTNQLFNDSQDHCR LLGYCIDTGKKGKSTGFNFMMSTFVGSDIKEFDFIPFAFEGSREAFFINDNYTIQRLKISNEILSKKIEDDLEGENKRKD ARQTLFKAIMETSDFIKRDVEVILKDISKEYFETLYIRKESIDIFKEFINEKIEYKSFCFSHKVTDKYYINIQKKVTESI LNNVLLDELIEIFLKEKNRSYLVLQLIKINVLIRRDKTMKDRLKGAFACAKQVSKAIESNKLDSYKQKLTSSIIFKDYDR VCQILLQLSNYSGIEFGFVYDLYDDFEENKDLAYTFINALSKKSENN >Mature_447_residues MKTSIQNEKYDTMLEPSDWRFSATIVGLLQYLNYHDLDYKLEEDYILYNSSGINEERYLDFVEYKYGEELHHRLVENILS NEEITEEQLKLINEKLVANTIMKKTFGKIKFDNTNKKEILDIINKNRYELIRETFRRKSNMYANYGNTNQLFNDSQDHCR LLGYCIDTGKKGKSTGFNFMMSTFVGSDIKEFDFIPFAFEGSREAFFINDNYTIQRLKISNEILSKKIEDDLEGENKRKD ARQTLFKAIMETSDFIKRDVEVILKDISKEYFETLYIRKESIDIFKEFINEKIEYKSFCFSHKVTDKYYINIQKKVTESI LNNVLLDELIEIFLKEKNRSYLVLQLIKINVLIRRDKTMKDRLKGAFACAKQVSKAIESNKLDSYKQKLTSSIIFKDYDR VCQILLQLSNYSGIEFGFVYDLYDDFEENKDLAYTFINALSKKSENN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53035; Mature: 53035
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTSIQNEKYDTMLEPSDWRFSATIVGLLQYLNYHDLDYKLEEDYILYNSSGINEERYLD CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCEEEECCCCCCHHHHHH FVEYKYGEELHHRLVENILSNEEITEEQLKLINEKLVANTIMKKTFGKIKFDNTNKKEIL HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHH DIINKNRYELIRETFRRKSNMYANYGNTNQLFNDSQDHCRLLGYCIDTGKKGKSTGFNFM HHHCCCHHHHHHHHHHHHHCCEECCCCCHHCCCCCHHHHHHHHHHHCCCCCCCCCCHHHH MSTFVGSDIKEFDFIPFAFEGSREAFFINDNYTIQRLKISNEILSKKIEDDLEGENKRKD HHHHHCCCHHHCCCCEEEEECCCCEEEECCCCEEEEEEHHHHHHHHHHHHHHCCCCHHHH ARQTLFKAIMETSDFIKRDVEVILKDISKEYFETLYIRKESIDIFKEFINEKIEYKSFCF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SHKVTDKYYINIQKKVTESILNNVLLDELIEIFLKEKNRSYLVLQLIKINVLIRRDKTMK HHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHEECCCHHH DRLKGAFACAKQVSKAIESNKLDSYKQKLTSSIIFKDYDRVCQILLQLSNYSGIEFGFVY HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE DLYDDFEENKDLAYTFINALSKKSENN HHHHHHCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure MKTSIQNEKYDTMLEPSDWRFSATIVGLLQYLNYHDLDYKLEEDYILYNSSGINEERYLD CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCEEEECCCCCCHHHHHH FVEYKYGEELHHRLVENILSNEEITEEQLKLINEKLVANTIMKKTFGKIKFDNTNKKEIL HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHH DIINKNRYELIRETFRRKSNMYANYGNTNQLFNDSQDHCRLLGYCIDTGKKGKSTGFNFM HHHCCCHHHHHHHHHHHHHCCEECCCCCHHCCCCCHHHHHHHHHHHCCCCCCCCCCHHHH MSTFVGSDIKEFDFIPFAFEGSREAFFINDNYTIQRLKISNEILSKKIEDDLEGENKRKD HHHHHCCCHHHCCCCEEEEECCCCEEEECCCCEEEEEEHHHHHHHHHHHHHHCCCCHHHH ARQTLFKAIMETSDFIKRDVEVILKDISKEYFETLYIRKESIDIFKEFINEKIEYKSFCF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SHKVTDKYYINIQKKVTESILNNVLLDELIEIFLKEKNRSYLVLQLIKINVLIRRDKTMK HHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHEECCCHHH DRLKGAFACAKQVSKAIESNKLDSYKQKLTSSIIFKDYDRVCQILLQLSNYSGIEFGFVY HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE DLYDDFEENKDLAYTFINALSKKSENN HHHHHHCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA