Definition Clostridium tetani E88 chromosome, complete genome.
Accession NC_004557
Length 2,799,251

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The map label for this gene is 28210837

Identifier: 28210837

GI number: 28210837

Start: 1210958

End: 1211866

Strand: Direct

Name: 28210837

Synonym: CTC01144

Alternate gene names: NA

Gene position: 1210958-1211866 (Clockwise)

Preceding gene: 28210836

Following gene: 28210838

Centisome position: 43.26

GC content: 27.61

Gene sequence:

>909_bases
GTGGAAAAAATGAAAGATAAAAAAGCATTAACTTTAACAGTAGTAGCAAATATGACTTCAAACTATTCAGAAGGATTAGG
GAATATAGCAAGTGTACAAAAGGTATTTAAAAATAGAAAAGTATATACTATAAGAAGTAGAGAAAGCTTAAAAAATGCCA
TTATGGTTCAAAGTGGAATGTATGATGATTTGCAAACAGAAGTGGATGGAGCAACTCAAAAGTTGGCAAATAAAGAGTTA
AATGCATCTAATTGTAGAGCTCTTGAAGGAGGATATATGAGTACAAAGGGGACTACAAATATTAGAAAGAGTTCTTTTTA
TTTAACAGATGCAATATCTTGTGAAAGCTTTGTAAATGAAACAAGGTTTCATAATAATCTATATTTAGCTAATAATGCAG
CACAAGCTAAAAATATAAATTTACAAGAGAAGTCTAGTGAAGCTGGACTTATGCCTTATCAATATGAATATGATAAATCT
TTAAAAATATATAGCATAACTATTGATTTAGAGATGATAGGAAAGGATGAGAATTTTCAGCAGGAAGAAGATTATAAAGA
AGCTGATAACAAGGAAAAAGCAGATAGAGTAAATTCTATATTAAATGCAATAGAAAATTTAAGTTTAACAGTAAAAGGTA
ACTTAGACAATGCAGAACCAGTATTTGTAGTTGGAGGTTTATCAAATAGAAAGACACATTATTTTGAAAATGTTGTAAAG
GTGGAAGAAGAAAAATTAATAATATCAGAAGACTTAAAAGATAAGATAGAAAAAGGATATCATGTAGGACTTTTAGAAGG
AAAGACATTACAAAATGAAAAGGAAATAAAAGAACAGTTAAATCCTATATCTATAACTAAATTTTTTGATATGATTAGAC
ATGAAGTAAATACTTACTTTGGTATATAA

Upstream 100 bases:

>100_bases
ATTTGTATATGATTTATATGATGATTTTGAAGAAAACAAAGACTTAGCATATACATTTATTAATGCATTATCAAAGAAAA
GTGAAAATAACTAATAAGAG

Downstream 100 bases:

>100_bases
CTAGAATAGAAGAAAGTAGGTAAAGATATGAAAGCATTAAGAATAGTGCTTACTCAAAGTAGTGCTAATTATAAAAAAGA
AGAAACTATAGATAATAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: CRISPR-Associated Autoregulator DevR Family Protein Protein; CRISPR-Associated Regulatory Protein DevR Family; Crispr-Associated Regulatory Protein Devr Family; CRISPR System Related Protein; CRISPR-Associated Autoregulator Devr Family Protein; CRISPR-Associated Regulatory Protein; CRISPR-Associated Negative Autoregulator

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MEKMKDKKALTLTVVANMTSNYSEGLGNIASVQKVFKNRKVYTIRSRESLKNAIMVQSGMYDDLQTEVDGATQKLANKEL
NASNCRALEGGYMSTKGTTNIRKSSFYLTDAISCESFVNETRFHNNLYLANNAAQAKNINLQEKSSEAGLMPYQYEYDKS
LKIYSITIDLEMIGKDENFQQEEDYKEADNKEKADRVNSILNAIENLSLTVKGNLDNAEPVFVVGGLSNRKTHYFENVVK
VEEEKLIISEDLKDKIEKGYHVGLLEGKTLQNEKEIKEQLNPISITKFFDMIRHEVNTYFGI

Sequences:

>Translated_302_residues
MEKMKDKKALTLTVVANMTSNYSEGLGNIASVQKVFKNRKVYTIRSRESLKNAIMVQSGMYDDLQTEVDGATQKLANKEL
NASNCRALEGGYMSTKGTTNIRKSSFYLTDAISCESFVNETRFHNNLYLANNAAQAKNINLQEKSSEAGLMPYQYEYDKS
LKIYSITIDLEMIGKDENFQQEEDYKEADNKEKADRVNSILNAIENLSLTVKGNLDNAEPVFVVGGLSNRKTHYFENVVK
VEEEKLIISEDLKDKIEKGYHVGLLEGKTLQNEKEIKEQLNPISITKFFDMIRHEVNTYFGI
>Mature_302_residues
MEKMKDKKALTLTVVANMTSNYSEGLGNIASVQKVFKNRKVYTIRSRESLKNAIMVQSGMYDDLQTEVDGATQKLANKEL
NASNCRALEGGYMSTKGTTNIRKSSFYLTDAISCESFVNETRFHNNLYLANNAAQAKNINLQEKSSEAGLMPYQYEYDKS
LKIYSITIDLEMIGKDENFQQEEDYKEADNKEKADRVNSILNAIENLSLTVKGNLDNAEPVFVVGGLSNRKTHYFENVVK
VEEEKLIISEDLKDKIEKGYHVGLLEGKTLQNEKEIKEQLNPISITKFFDMIRHEVNTYFGI

Specific function: Unknown

COG id: COG1857

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34314; Mature: 34314

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKMKDKKALTLTVVANMTSNYSEGLGNIASVQKVFKNRKVYTIRSRESLKNAIMVQSGM
CCCCCCCCEEEEEEEECCCCCHHHHCCHHHHHHHHHHCCCEEEEECHHHHHHHHHHCCCC
YDDLQTEVDGATQKLANKELNASNCRALEGGYMSTKGTTNIRKSSFYLTDAISCESFVNE
CHHHHHHHHHHHHHHHCCCCCCCCCEEECCCEECCCCCCCCCCCEEEEEEHHHHHHHHHH
TRFHNNLYLANNAAQAKNINLQEKSSEAGLMPYQYEYDKSLKIYSITIDLEMIGKDENFQ
HHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEEEEEEEECCCCCCC
QEEDYKEADNKEKADRVNSILNAIENLSLTVKGNLDNAEPVFVVGGLSNRKTHYFENVVK
CHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHH
VEEEKLIISEDLKDKIEKGYHVGLLEGKTLQNEKEIKEQLNPISITKFFDMIRHEVNTYF
HHHHHEEHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHC
GI
CC
>Mature Secondary Structure
MEKMKDKKALTLTVVANMTSNYSEGLGNIASVQKVFKNRKVYTIRSRESLKNAIMVQSGM
CCCCCCCCEEEEEEEECCCCCHHHHCCHHHHHHHHHHCCCEEEEECHHHHHHHHHHCCCC
YDDLQTEVDGATQKLANKELNASNCRALEGGYMSTKGTTNIRKSSFYLTDAISCESFVNE
CHHHHHHHHHHHHHHHCCCCCCCCCEEECCCEECCCCCCCCCCCEEEEEEHHHHHHHHHH
TRFHNNLYLANNAAQAKNINLQEKSSEAGLMPYQYEYDKSLKIYSITIDLEMIGKDENFQ
HHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEEEEEEEECCCCCCC
QEEDYKEADNKEKADRVNSILNAIENLSLTVKGNLDNAEPVFVVGGLSNRKTHYFENVVK
CHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHH
VEEEKLIISEDLKDKIEKGYHVGLLEGKTLQNEKEIKEQLNPISITKFFDMIRHEVNTYF
HHHHHEEHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHC
GI
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA