| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28210813
Identifier: 28210813
GI number: 28210813
Start: 1182597
End: 1183403
Strand: Direct
Name: 28210813
Synonym: CTC01115
Alternate gene names: NA
Gene position: 1182597-1183403 (Clockwise)
Preceding gene: 28210812
Following gene: 28210814
Centisome position: 42.25
GC content: 24.29
Gene sequence:
>807_bases ATGAGTGAAGAAAAATATAAATTCCAAGAATGTGAGTACCTATTAGATAAATTTGAGGATTTTAATAAAGATGCTCCTGA TATACTAGCAAAGGTTTTACAGAAAAGGAGTGGAATAAATTCTGAGGAATTTAACGAATTATATAAATTGCTTATAAATA TGCACTCAAATGAAGAAAAATATAAAGGAGTAAAGGCAAAGACAAAAGGAAATATATTAGAAAAAATAATAGAGCTTATA ACTATAAAAACAAAATTATTTAAATTGTTTACTAATGTAAGTAATAATTCAAATGAATATGATATTATAATTACTCCAAG TGAATTAGCTACAATGTCATATAATGCATTACCTGAGATCATATATCAGCCAATAATATGTGAGTGTAAAAATTATAAAA AACCTGTTGATGTAACTTGGATAGGAAAGTTTTATATGCTCTTATCTATTTCAAATATAAAATGTGGAATTATTTTCTCT TATGAAGGTATTACTAGTGGAAAAGGTGCAGGCAAAGATAAGGGACAAAATGATTCTGAAGAATGGAATAATGCTAAAGG ATTGATAAAAAAGATTTTTCTTAAAGATGGGATAGTTATTATAGATATATCAAAAAAAGAATTGGATTCAATTAAAAATG GTAAAAGATTATATGACATAATACAATCGAAGTATGCAGATTTAATGTTTATGACTAATATTGAAAAATATAAAATAGAG CATATATCAAGTGAAAAAATTAAGGAAATAATTGAAGATGTTAATGAACAAGTAGAATTCTATGAAAGTAAAAAATTTAA AAAGTAG
Upstream 100 bases:
>100_bases ATAGAAGATATACCTGAAGAGCCATGTAGCAATTGCGAAAAAAAATGTTCTATTTTAAAAAATGTGATAGTTATATATAA AGTTATAAGTAGGGATATAT
Downstream 100 bases:
>100_bases TAGGTAGATTAAATATAATTATCTTAAATCAAGCTACACTAGAGGACTTGGAAGAGTTAAAGCAACTAATAAAAGAAAGA GAAGAAAATTTAAATAGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MSEEKYKFQECEYLLDKFEDFNKDAPDILAKVLQKRSGINSEEFNELYKLLINMHSNEEKYKGVKAKTKGNILEKIIELI TIKTKLFKLFTNVSNNSNEYDIIITPSELATMSYNALPEIIYQPIICECKNYKKPVDVTWIGKFYMLLSISNIKCGIIFS YEGITSGKGAGKDKGQNDSEEWNNAKGLIKKIFLKDGIVIIDISKKELDSIKNGKRLYDIIQSKYADLMFMTNIEKYKIE HISSEKIKEIIEDVNEQVEFYESKKFKK
Sequences:
>Translated_268_residues MSEEKYKFQECEYLLDKFEDFNKDAPDILAKVLQKRSGINSEEFNELYKLLINMHSNEEKYKGVKAKTKGNILEKIIELI TIKTKLFKLFTNVSNNSNEYDIIITPSELATMSYNALPEIIYQPIICECKNYKKPVDVTWIGKFYMLLSISNIKCGIIFS YEGITSGKGAGKDKGQNDSEEWNNAKGLIKKIFLKDGIVIIDISKKELDSIKNGKRLYDIIQSKYADLMFMTNIEKYKIE HISSEKIKEIIEDVNEQVEFYESKKFKK >Mature_267_residues SEEKYKFQECEYLLDKFEDFNKDAPDILAKVLQKRSGINSEEFNELYKLLINMHSNEEKYKGVKAKTKGNILEKIIELIT IKTKLFKLFTNVSNNSNEYDIIITPSELATMSYNALPEIIYQPIICECKNYKKPVDVTWIGKFYMLLSISNIKCGIIFSY EGITSGKGAGKDKGQNDSEEWNNAKGLIKKIFLKDGIVIIDISKKELDSIKNGKRLYDIIQSKYADLMFMTNIEKYKIEH ISSEKIKEIIEDVNEQVEFYESKKFKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31136; Mature: 31005
Theoretical pI: Translated: 7.89; Mature: 7.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEEKYKFQECEYLLDKFEDFNKDAPDILAKVLQKRSGINSEEFNELYKLLINMHSNEEK CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHH YKGVKAKTKGNILEKIIELITIKTKLFKLFTNVSNNSNEYDIIITPSELATMSYNALPEI HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHH IYQPIICECKNYKKPVDVTWIGKFYMLLSISNIKCGIIFSYEGITSGKGAGKDKGQNDSE HHCCHHHHCCCCCCCCCEEHHHHHHHHEEECCCEEEEEEEECCCCCCCCCCCCCCCCCHH EWNNAKGLIKKIFLKDGIVIIDISKKELDSIKNGKRLYDIIQSKYADLMFMTNIEKYKIE HHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHH HISSEKIKEIIEDVNEQVEFYESKKFKK HCCHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SEEKYKFQECEYLLDKFEDFNKDAPDILAKVLQKRSGINSEEFNELYKLLINMHSNEEK CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHH YKGVKAKTKGNILEKIIELITIKTKLFKLFTNVSNNSNEYDIIITPSELATMSYNALPEI HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHH IYQPIICECKNYKKPVDVTWIGKFYMLLSISNIKCGIIFSYEGITSGKGAGKDKGQNDSE HHCCHHHHCCCCCCCCCEEHHHHHHHHEEECCCEEEEEEEECCCCCCCCCCCCCCCCCHH EWNNAKGLIKKIFLKDGIVIIDISKKELDSIKNGKRLYDIIQSKYADLMFMTNIEKYKIE HHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHH HISSEKIKEIIEDVNEQVEFYESKKFKK HCCHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA