| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is 28210797
Identifier: 28210797
GI number: 28210797
Start: 1163827
End: 1164699
Strand: Direct
Name: 28210797
Synonym: CTC01096
Alternate gene names: NA
Gene position: 1163827-1164699 (Clockwise)
Preceding gene: 28210796
Following gene: 28210798
Centisome position: 41.58
GC content: 29.9
Gene sequence:
>873_bases ATGGATGGTAAAACATTAGTTAATGTAATTAAGGTAAATTTTATTGATGAGGTTACAAATATAAAACATACAATTGAAAC TTCTGATGAAATAGATATAGAACCTATTAAATCTGACGGTAAAAGAGATATATTAAGAGTTAAAAATACTATTTATGGGA TTAATGAAACAGAAGATATTGTAATTGGTTATAAATTAAAACTTAAAGACAACTTATTTAATATGAAAACTATGTCCCTT ATTGATGGTGGTAGTATAGAAGGTAATAAATATTGTGGTGCAGAAGCAGGAAAGGTAGCAGAAAGACATCCATTTACAAT GGAAATATTTACAGAAGAAAAAGATTATAGTAGAACTACAGGTTATGCTAAATTTACTTACAAGCATTGTAAAGGTAAAC CTGCTAAATATAAAGTTAAAGATGGTGAATTCTTAGTTCCAGAATATGAAGCAGAATCAATTCCATTTAGAGGAGAGAAA CCAGTTGAAATAGAATTCTTGGATACTTTACCTAGCAAACCAGAAAAACCAGATCCACCAGTTGAAGATATAGGAGTTGA AGGTGGAACTGTAAAAGATACAAATACAGATGTTGGAGTAGAAATAACTAATAGGATAGTATGGACATTTAAAGAACAAA TAAACCAAGATTATGTAACTAAGACTAATTTTAGCACAAGGAGAAAATCAGATAATAGCTTGGTTCAAGGTAATGTAACT ATAGATGGAACTAAGAAAATAGTAACATTTGTACCTACAAGTTTAGCTGTGGACGTAGTGTATATAGCACAAGCTAAGCC AGTTGACAAGCTTAATGGTAGTGGTAAGACTGCAGCATTATCTACAGAGTTTAAGACAATAAAAATAAAATAG
Upstream 100 bases:
>100_bases CCTACAGGTAATGAAACACCAGCAATTATTGATGAAAAAATAGAAGCTTATACTGCTAGCATAGAGTACCAACAATTCAA GAGTTTAAGGAGGTAATAAT
Downstream 100 bases:
>100_bases TAAGGGGAATGAATGATGAGTATACAAGTAACAAGTATAGAAGATTTAAAAAAGATGGCTGAATATGATTTAATTGAATT ACCAAGGTTTAAAGCAGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MDGKTLVNVIKVNFIDEVTNIKHTIETSDEIDIEPIKSDGKRDILRVKNTIYGINETEDIVIGYKLKLKDNLFNMKTMSL IDGGSIEGNKYCGAEAGKVAERHPFTMEIFTEEKDYSRTTGYAKFTYKHCKGKPAKYKVKDGEFLVPEYEAESIPFRGEK PVEIEFLDTLPSKPEKPDPPVEDIGVEGGTVKDTNTDVGVEITNRIVWTFKEQINQDYVTKTNFSTRRKSDNSLVQGNVT IDGTKKIVTFVPTSLAVDVVYIAQAKPVDKLNGSGKTAALSTEFKTIKIK
Sequences:
>Translated_290_residues MDGKTLVNVIKVNFIDEVTNIKHTIETSDEIDIEPIKSDGKRDILRVKNTIYGINETEDIVIGYKLKLKDNLFNMKTMSL IDGGSIEGNKYCGAEAGKVAERHPFTMEIFTEEKDYSRTTGYAKFTYKHCKGKPAKYKVKDGEFLVPEYEAESIPFRGEK PVEIEFLDTLPSKPEKPDPPVEDIGVEGGTVKDTNTDVGVEITNRIVWTFKEQINQDYVTKTNFSTRRKSDNSLVQGNVT IDGTKKIVTFVPTSLAVDVVYIAQAKPVDKLNGSGKTAALSTEFKTIKIK >Mature_290_residues MDGKTLVNVIKVNFIDEVTNIKHTIETSDEIDIEPIKSDGKRDILRVKNTIYGINETEDIVIGYKLKLKDNLFNMKTMSL IDGGSIEGNKYCGAEAGKVAERHPFTMEIFTEEKDYSRTTGYAKFTYKHCKGKPAKYKVKDGEFLVPEYEAESIPFRGEK PVEIEFLDTLPSKPEKPDPPVEDIGVEGGTVKDTNTDVGVEITNRIVWTFKEQINQDYVTKTNFSTRRKSDNSLVQGNVT IDGTKKIVTFVPTSLAVDVVYIAQAKPVDKLNGSGKTAALSTEFKTIKIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32446; Mature: 32446
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGKTLVNVIKVNFIDEVTNIKHTIETSDEIDIEPIKSDGKRDILRVKNTIYGINETEDI CCCCEEEEEEEEEHHHHHHCCEEEECCCCCCEEEECCCCCCHHHHEEHHHEECCCCCCEE VIGYKLKLKDNLFNMKTMSLIDGGSIEGNKYCGAEAGKVAERHPFTMEIFTEEKDYSRTT EEEEEEEECCCEECEEEEEEECCCCCCCCCCCCCCCCCHHHCCCCEEEEEECCCCCCCCC GYAKFTYKHCKGKPAKYKVKDGEFLVPEYEAESIPFRGEKPVEIEFLDTLPSKPEKPDPP CEEEEEEEHHCCCCCEEEECCCCEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCC VEDIGVEGGTVKDTNTDVGVEITNRIVWTFKEQINQDYVTKTNFSTRRKSDNSLVQGNVT HHHCCCCCCEEECCCCCCCEEEECEEEEEEHHHCCCCCEEECCCCCCCCCCCCEEEEEEE IDGTKKIVTFVPTSLAVDVVYIAQAKPVDKLNGSGKTAALSTEFKTIKIK ECCCCEEEEEECCCCEEEEEEEECCCCHHHCCCCCCEEEEEECEEEEEEC >Mature Secondary Structure MDGKTLVNVIKVNFIDEVTNIKHTIETSDEIDIEPIKSDGKRDILRVKNTIYGINETEDI CCCCEEEEEEEEEHHHHHHCCEEEECCCCCCEEEECCCCCCHHHHEEHHHEECCCCCCEE VIGYKLKLKDNLFNMKTMSLIDGGSIEGNKYCGAEAGKVAERHPFTMEIFTEEKDYSRTT EEEEEEEECCCEECEEEEEEECCCCCCCCCCCCCCCCCHHHCCCCEEEEEECCCCCCCCC GYAKFTYKHCKGKPAKYKVKDGEFLVPEYEAESIPFRGEKPVEIEFLDTLPSKPEKPDPP CEEEEEEEHHCCCCCEEEECCCCEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCC VEDIGVEGGTVKDTNTDVGVEITNRIVWTFKEQINQDYVTKTNFSTRRKSDNSLVQGNVT HHHCCCCCCEEECCCCCCCEEEECEEEEEEHHHCCCCCEEECCCCCCCCCCCCEEEEEEE IDGTKKIVTFVPTSLAVDVVYIAQAKPVDKLNGSGKTAALSTEFKTIKIK ECCCCEEEEEECCCCEEEEEEEECCCCHHHCCCCCCEEEEEECEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA