Definition Clostridium tetani E88 chromosome, complete genome.
Accession NC_004557
Length 2,799,251

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The map label for this gene is 28210798

Identifier: 28210798

GI number: 28210798

Start: 1164712

End: 1165176

Strand: Direct

Name: 28210798

Synonym: CTC01097

Alternate gene names: NA

Gene position: 1164712-1165176 (Clockwise)

Preceding gene: 28210797

Following gene: 28210799

Centisome position: 41.61

GC content: 32.9

Gene sequence:

>465_bases
ATGATGAGTATACAAGTAACAAGTATAGAAGATTTAAAAAAGATGGCTGAATATGATTTAATTGAATTACCAAGGTTTAA
AGCAGAGATACCTTTTGTAGCTAAGGTTAAGAGGGCATCCCTTTTAAATTTAGTTCGAAAGGGTGTAATACCTAATAAAT
TACTTAGTGCAGCAGAGGAATTATTCTATGGCAAAAGCTCCAATAAGGGTAATGTAGATATGAAAGCGTTGACAGATGTT
ATGTTTATTATGGCAGAAAATGCACTTATAGAACCTTCAGCTAGGGATTTGAAAGAAGTAGAGCTTGAATTAACAGATGA
ACAGATAGTAGCTTTATTTAATTATACACAAGAGGGGTTAAATGAGATAGAAAAATTTCCTGAAAAGCCAGAGAATACTG
TCGGTGATAACAATGAGCAAACGGTATCAAATAAGACCAAGCCAGATAATAGCATTAACAAATGA

Upstream 100 bases:

>100_bases
AGCACAAGCTAAGCCAGTTGACAAGCTTAATGGTAGTGGTAAGACTGCAGCATTATCTACAGAGTTTAAGACAATAAAAA
TAAAATAGTAAGGGGAATGA

Downstream 100 bases:

>100_bases
TTATGAAGCGTTTTGTTTTGATGAAGCTTGTACATATATACTAGCTGAAATGAGTAAAGAAAATGGCACAGAACCTAAAT
TCGAAGATAATAAGAACGTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MMSIQVTSIEDLKKMAEYDLIELPRFKAEIPFVAKVKRASLLNLVRKGVIPNKLLSAAEELFYGKSSNKGNVDMKALTDV
MFIMAENALIEPSARDLKEVELELTDEQIVALFNYTQEGLNEIEKFPEKPENTVGDNNEQTVSNKTKPDNSINK

Sequences:

>Translated_154_residues
MMSIQVTSIEDLKKMAEYDLIELPRFKAEIPFVAKVKRASLLNLVRKGVIPNKLLSAAEELFYGKSSNKGNVDMKALTDV
MFIMAENALIEPSARDLKEVELELTDEQIVALFNYTQEGLNEIEKFPEKPENTVGDNNEQTVSNKTKPDNSINK
>Mature_154_residues
MMSIQVTSIEDLKKMAEYDLIELPRFKAEIPFVAKVKRASLLNLVRKGVIPNKLLSAAEELFYGKSSNKGNVDMKALTDV
MFIMAENALIEPSARDLKEVELELTDEQIVALFNYTQEGLNEIEKFPEKPENTVGDNNEQTVSNKTKPDNSINK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17365; Mature: 17365

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSIQVTSIEDLKKMAEYDLIELPRFKAEIPFVAKVKRASLLNLVRKGVIPNKLLSAAEE
CCEEEECCHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
LFYGKSSNKGNVDMKALTDVMFIMAENALIEPSARDLKEVELELTDEQIVALFNYTQEGL
HHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHH
NEIEKFPEKPENTVGDNNEQTVSNKTKPDNSINK
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MMSIQVTSIEDLKKMAEYDLIELPRFKAEIPFVAKVKRASLLNLVRKGVIPNKLLSAAEE
CCEEEECCHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
LFYGKSSNKGNVDMKALTDVMFIMAENALIEPSARDLKEVELELTDEQIVALFNYTQEGL
HHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHH
NEIEKFPEKPENTVGDNNEQTVSNKTKPDNSINK
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA