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The map label for this gene is yqaJ [H]

Identifier: 28210776

GI number: 28210776

Start: 1143708

End: 1145051

Strand: Direct

Name: yqaJ [H]

Synonym: CTC01074

Alternate gene names: 28210776

Gene position: 1143708-1145051 (Clockwise)

Preceding gene: 28210775

Following gene: 28210777

Centisome position: 40.86

GC content: 28.65

Gene sequence:

>1344_bases
ATGATAAAAGATATAACATTAGCACTTTTAACAACAACTATAAATAGATATTCTAGTTTAGGTGACAGTATCAGAGCAAT
ACACAAAGAAGCAGTGATTAACGATTTAACAGGTATTTTAGATTATGTAACAGATTTAAAAGAAGAGAATAATCAGCCTA
TAACAGTAGTTTTAAATTCTAATGGAGAAGTTGAATTTCTTAAGAAAAGGATTAGAGAACTTGAGGAAAGCTGTGAAACT
GATAATGAAGTTATAGAAAAGCAACATAGAAAAATTAAGGAGTTACAGAATAGCAATTATAGATGGAATACACTTTGTGT
TCAACTTAAAGCAAAAAATAAAAGGTTTGAAGCTGAAAATAAAGATTTAAAAAGTAGATTTGGAGTAGATAAATTAGAAA
TTATGAAAAGGGGGGGAAGTGGATTGGATAAACTCAAATGGCTTCAAGAAAGACAAAAAGGAATTGGTGGAAGTGATGCT
GGGGCAATACTTGGAATAAATAAATGGAAAACACCATTCCAGATATATTTAGAAAAAACAGAACCTATAACAGAAATTAA
TGAACAAAGTGAAGCAGCATATTGGGGAGATCAATTTGAAGAAGTAGTTGCTAAAGAGTTTGAAAAAAGGACAGGTAAAA
AAGTAAGAAGAGATAGAAGGCATTTTAAACATGAAAAGTATCCATTTATGGTTGCAAATATAGACAGAAGAGTTATAGGA
GAAAATGCAGTATTAGAATGTAAAACAGCTAATCAATTCTTAGCTAAAGAATGGGAAGGAGAAGAAATACCAGCTAGCTA
TTTAGTACAAGTGCAGCATTATTTAGAAGTAACAGGAGCAGAAAAAGGATATATAGCAGTATTAATAGGTGGACAAAAAT
TTATTTGGAAAGAAGTAGAACGTGATGAAGAACTTATAGAAATTATAATCAATACTGAAAAAGAATTTTGGGAAAATCAT
GTGCTTAAGAAAATTCCTCCAGCATTGGATGGAAGTTCAGCAGCAGAAAAATACTTAAATGAAAAATATAAAAAATCAAA
TTCAAATATAAGTATTGATTTAAAATCAGAATACATGGATAAAATAGACGAGCTAATGCAACTTAAAGAAACTATTAAAA
ATTTAGAAGGACAAGCTAAAGAAATTGAAAATAACATAAAAAATGAACTTAAAGAAGCTGAAATAGGATATGCCCAAGGG
TATGAAGTCAATTGGAAAAAAGTTATTTCAAATAGAGTAGATAGTAAACTTCTAAAGGAAAAATATTCAGAGATTTATAA
AAAAGTATGCAAGGAAAGTGTATTTAGAAGATTTAATATTAAAAACTTAAAGGAGGAAAATTAA

Upstream 100 bases:

>100_bases
AGAAGTATGCATTAAAAAAAGAGCTGCAAGAGCAGCCAAATAAAAAACATAATTAAAAAACCTAACCTAAAGTATAAGAG
AAAACGGAGGATTTGTAAAG

Downstream 100 bases:

>100_bases
GATGGCAACAAATGAAAGTTTAAAAAATCAACTAAGCACTAAGAAAGAGACAGGGTTAGGGAGTGCAGGAAATACAATAA
AAGGTTTAATGAACAGCCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 447; Mature: 447

Protein sequence:

>447_residues
MIKDITLALLTTTINRYSSLGDSIRAIHKEAVINDLTGILDYVTDLKEENNQPITVVLNSNGEVEFLKKRIRELEESCET
DNEVIEKQHRKIKELQNSNYRWNTLCVQLKAKNKRFEAENKDLKSRFGVDKLEIMKRGGSGLDKLKWLQERQKGIGGSDA
GAILGINKWKTPFQIYLEKTEPITEINEQSEAAYWGDQFEEVVAKEFEKRTGKKVRRDRRHFKHEKYPFMVANIDRRVIG
ENAVLECKTANQFLAKEWEGEEIPASYLVQVQHYLEVTGAEKGYIAVLIGGQKFIWKEVERDEELIEIIINTEKEFWENH
VLKKIPPALDGSSAAEKYLNEKYKKSNSNISIDLKSEYMDKIDELMQLKETIKNLEGQAKEIENNIKNELKEAEIGYAQG
YEVNWKKVISNRVDSKLLKEKYSEIYKKVCKESVFRRFNIKNLKEEN

Sequences:

>Translated_447_residues
MIKDITLALLTTTINRYSSLGDSIRAIHKEAVINDLTGILDYVTDLKEENNQPITVVLNSNGEVEFLKKRIRELEESCET
DNEVIEKQHRKIKELQNSNYRWNTLCVQLKAKNKRFEAENKDLKSRFGVDKLEIMKRGGSGLDKLKWLQERQKGIGGSDA
GAILGINKWKTPFQIYLEKTEPITEINEQSEAAYWGDQFEEVVAKEFEKRTGKKVRRDRRHFKHEKYPFMVANIDRRVIG
ENAVLECKTANQFLAKEWEGEEIPASYLVQVQHYLEVTGAEKGYIAVLIGGQKFIWKEVERDEELIEIIINTEKEFWENH
VLKKIPPALDGSSAAEKYLNEKYKKSNSNISIDLKSEYMDKIDELMQLKETIKNLEGQAKEIENNIKNELKEAEIGYAQG
YEVNWKKVISNRVDSKLLKEKYSEIYKKVCKESVFRRFNIKNLKEEN
>Mature_447_residues
MIKDITLALLTTTINRYSSLGDSIRAIHKEAVINDLTGILDYVTDLKEENNQPITVVLNSNGEVEFLKKRIRELEESCET
DNEVIEKQHRKIKELQNSNYRWNTLCVQLKAKNKRFEAENKDLKSRFGVDKLEIMKRGGSGLDKLKWLQERQKGIGGSDA
GAILGINKWKTPFQIYLEKTEPITEINEQSEAAYWGDQFEEVVAKEFEKRTGKKVRRDRRHFKHEKYPFMVANIDRRVIG
ENAVLECKTANQFLAKEWEGEEIPASYLVQVQHYLEVTGAEKGYIAVLIGGQKFIWKEVERDEELIEIIINTEKEFWENH
VLKKIPPALDGSSAAEKYLNEKYKKSNSNISIDLKSEYMDKIDELMQLKETIKNLEGQAKEIENNIKNELKEAEIGYAQG
YEVNWKKVISNRVDSKLLKEKYSEIYKKVCKESVFRRFNIKNLKEEN

Specific function: Unknown

COG id: COG5377

COG function: function code L; Phage-related protein, predicted endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011604
- InterPro:   IPR017482
- InterPro:   IPR011335
- InterPro:   IPR019080 [H]

Pfam domain/function: PF09588 YqaJ [H]

EC number: NA

Molecular weight: Translated: 52083; Mature: 52083

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKDITLALLTTTINRYSSLGDSIRAIHKEAVINDLTGILDYVTDLKEENNQPITVVLNS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC
NGEVEFLKKRIRELEESCETDNEVIEKQHRKIKELQNSNYRWNTLCVQLKAKNKRFEAEN
CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCC
KDLKSRFGVDKLEIMKRGGSGLDKLKWLQERQKGIGGSDAGAILGINKWKTPFQIYLEKT
HHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCEEEEECC
EPITEINEQSEAAYWGDQFEEVVAKEFEKRTGKKVRRDRRHFKHEKYPFMVANIDRRVIG
CCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHC
ENAVLECKTANQFLAKEWEGEEIPASYLVQVQHYLEVTGAEKGYIAVLIGGQKFIWKEVE
CCCEEEECCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHH
RDEELIEIIINTEKEFWENHVLKKIPPALDGSSAAEKYLNEKYKKSNSNISIDLKSEYMD
HHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEHHHHHH
KIDELMQLKETIKNLEGQAKEIENNIKNELKEAEIGYAQGYEVNWKKVISNRVDSKLLKE
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
KYSEIYKKVCKESVFRRFNIKNLKEEN
HHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MIKDITLALLTTTINRYSSLGDSIRAIHKEAVINDLTGILDYVTDLKEENNQPITVVLNS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC
NGEVEFLKKRIRELEESCETDNEVIEKQHRKIKELQNSNYRWNTLCVQLKAKNKRFEAEN
CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCC
KDLKSRFGVDKLEIMKRGGSGLDKLKWLQERQKGIGGSDAGAILGINKWKTPFQIYLEKT
HHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCEEEEECC
EPITEINEQSEAAYWGDQFEEVVAKEFEKRTGKKVRRDRRHFKHEKYPFMVANIDRRVIG
CCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHC
ENAVLECKTANQFLAKEWEGEEIPASYLVQVQHYLEVTGAEKGYIAVLIGGQKFIWKEVE
CCCEEEECCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHH
RDEELIEIIINTEKEFWENHVLKKIPPALDGSSAAEKYLNEKYKKSNSNISIDLKSEYMD
HHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEHHHHHH
KIDELMQLKETIKNLEGQAKEIENNIKNELKEAEIGYAQGYEVNWKKVISNRVDSKLLKE
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
KYSEIYKKVCKESVFRRFNIKNLKEEN
HHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7704261; 8969508; 9384377; 7489895 [H]