Click here to switch to the map view.

The map label for this gene is yqaK [H]

Identifier: 28210777

GI number: 28210777

Start: 1145053

End: 1145859

Strand: Direct

Name: yqaK [H]

Synonym: CTC01075

Alternate gene names: 28210777

Gene position: 1145053-1145859 (Clockwise)

Preceding gene: 28210776

Following gene: 28210778

Centisome position: 40.91

GC content: 30.98

Gene sequence:

>807_bases
ATGGCAACAAATGAAAGTTTAAAAAATCAACTAAGCACTAAGAAAGAGACAGGGTTAGGGAGTGCAGGAAATACAATAAA
AGGTTTAATGAACAGCCCAGCGATAAAGAAAAGATTTGAAGAGGTTTTAAAGCAAAGAGCACCTCAATACATGAGCAGTA
TAGTTAATTTGGTTAATAGTGATATAAACTTAAAGAAATGCGACCAAATGAGTGTGGTTGCAAGTTGTATGGTAGCAGCA
ACTTTAGATTTACCAGTAGATAAAAATTTGGGGTATGCATGGGTAGTACCTTATGGTAATAAAGCTCAATTTCAACTAGG
ATATAAGGGTTATGTGCAACTAGCATTAAGAACAGGGCAATATAAATCTATAAATGTTATAGAGATCCATGAGGGTGAAT
TAATAGATTGGAATCCACTTACTGAAGAATTAAAGATAGATTTCTCTAAAAAAGAATCAGATGCAGTAATTGGATATGCA
GGATATTTTGAACTACTTAATGGATTTAAAAAATCAACTTACTGGACCAAAGAACAAATAACTAAACATAAAAATAAATT
TAGTAAATCAGACTTTGGCTGGAAAAAAGATTTTGATGCAATGGCTAGGAAGACAGTATTAAGAAATATGTTAAGTAAAT
GGGGAATATTGAGTATAGAAATGCAAAATGCTTATACTGCTGACCAAGGAATAATAAAAAATGAAATAATCGAAACTGGT
GAAGTAAAAGAAAATATAGAATATATAGAAGCTGATTTTGAAAGTTATGAAGATAATTCAATAGAAGAAGGTGGGGCAAA
TGAATAA

Upstream 100 bases:

>100_bases
AAACTTCTAAAGGAAAAATATTCAGAGATTTATAAAAAAGTATGCAAGGAAAGTGTATTTAGAAGATTTAATATTAAAAA
CTTAAAGGAGGAAAATTAAG

Downstream 100 bases:

>100_bases
TATACCAGAGTGTATGTATGACTATAGATATGAATTTGAAAAGATGCAAATAATAGATAACTGTTGTAATTGCGACTGCA
ATATTTGTGAAGGAGAAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 267

Protein sequence:

>268_residues
MATNESLKNQLSTKKETGLGSAGNTIKGLMNSPAIKKRFEEVLKQRAPQYMSSIVNLVNSDINLKKCDQMSVVASCMVAA
TLDLPVDKNLGYAWVVPYGNKAQFQLGYKGYVQLALRTGQYKSINVIEIHEGELIDWNPLTEELKIDFSKKESDAVIGYA
GYFELLNGFKKSTYWTKEQITKHKNKFSKSDFGWKKDFDAMARKTVLRNMLSKWGILSIEMQNAYTADQGIIKNEIIETG
EVKENIEYIEADFESYEDNSIEEGGANE

Sequences:

>Translated_268_residues
MATNESLKNQLSTKKETGLGSAGNTIKGLMNSPAIKKRFEEVLKQRAPQYMSSIVNLVNSDINLKKCDQMSVVASCMVAA
TLDLPVDKNLGYAWVVPYGNKAQFQLGYKGYVQLALRTGQYKSINVIEIHEGELIDWNPLTEELKIDFSKKESDAVIGYA
GYFELLNGFKKSTYWTKEQITKHKNKFSKSDFGWKKDFDAMARKTVLRNMLSKWGILSIEMQNAYTADQGIIKNEIIETG
EVKENIEYIEADFESYEDNSIEEGGANE
>Mature_267_residues
ATNESLKNQLSTKKETGLGSAGNTIKGLMNSPAIKKRFEEVLKQRAPQYMSSIVNLVNSDINLKKCDQMSVVASCMVAAT
LDLPVDKNLGYAWVVPYGNKAQFQLGYKGYVQLALRTGQYKSINVIEIHEGELIDWNPLTEELKIDFSKKESDAVIGYAG
YFELLNGFKKSTYWTKEQITKHKNKFSKSDFGWKKDFDAMARKTVLRNMLSKWGILSIEMQNAYTADQGIIKNEIIETGE
VKENIEYIEADFESYEDNSIEEGGANE

Specific function: Binds To Single-Stranded DNA And Also Promotes The Renaturation Of Complementary Single-Stranded DNA. Function In Recombination. Has A Function Similar To That Of Lambda Redb. [C]

COG id: COG3723

COG function: function code L; Recombinational DNA repair protein (RecE pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787611, Length=217, Percent_Identity=26.2672811059908, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004590
- InterPro:   IPR018330 [H]

Pfam domain/function: PF03837 RecT [H]

EC number: NA

Molecular weight: Translated: 30278; Mature: 30147

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATNESLKNQLSTKKETGLGSAGNTIKGLMNSPAIKKRFEEVLKQRAPQYMSSIVNLVNS
CCCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DINLKKCDQMSVVASCMVAATLDLPVDKNLGYAWVVPYGNKAQFQLGYKGYVQLALRTGQ
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEECCCCEEEEEEECCC
YKSINVIEIHEGELIDWNPLTEELKIDFSKKESDAVIGYAGYFELLNGFKKSTYWTKEQI
CCCEEEEEECCCCEECCCCCCHHHEECCCCCCCCEEEEHHHHHHHHHHHHHCCCCCHHHH
TKHKNKFSKSDFGWKKDFDAMARKTVLRNMLSKWGILSIEMQNAYTADQGIIKNEIIETG
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHCCC
EVKENIEYIEADFESYEDNSIEEGGANE
CHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
ATNESLKNQLSTKKETGLGSAGNTIKGLMNSPAIKKRFEEVLKQRAPQYMSSIVNLVNS
CCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DINLKKCDQMSVVASCMVAATLDLPVDKNLGYAWVVPYGNKAQFQLGYKGYVQLALRTGQ
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEECCCCEEEEEEECCC
YKSINVIEIHEGELIDWNPLTEELKIDFSKKESDAVIGYAGYFELLNGFKKSTYWTKEQI
CCCEEEEEECCCCEECCCCCCHHHEECCCCCCCCEEEEHHHHHHHHHHHHHCCCCCHHHH
TKHKNKFSKSDFGWKKDFDAMARKTVLRNMLSKWGILSIEMQNAYTADQGIIKNEIIETG
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHCCC
EVKENIEYIEADFESYEDNSIEEGGANE
CHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704261; 8969508; 9384377; 7489895 [H]