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The map label for this gene is yddH [C]

Identifier: 28210749

GI number: 28210749

Start: 1116761

End: 1117255

Strand: Direct

Name: yddH [C]

Synonym: CTC01047

Alternate gene names: 28210749

Gene position: 1116761-1117255 (Clockwise)

Preceding gene: 28210748

Following gene: 28210750

Centisome position: 39.89

GC content: 26.87

Gene sequence:

>495_bases
ATGAAATTTGAAGAAACTTTAGGAAGGGCAATTGATCTAATTAAGGAAAAAGGAGCATTTTTAACTATAAAAGATGATGA
TAAGGTAAATACTATGACTATAGGATGGGCGAATATAGGATATCAATGGAGAATGCCTATTTTCTCAGTTATGGTAAGGA
AATCTAGATATACCTATGAGTTAATAGAAAAGGCTTCAGAATTTACTGTAAGTATACCTGTAGATGTTAATTTAAAAAAA
GAACTAACCTTTTGTGGAAGTAAATCAGGAAGAGATGTAGATAAAATTAAAGAATGCAATTTAAAATTAGAAAAGGGTAA
AAAAATTGAAACACCTATAATAGATAATTGTGAAATGCATTTTGAATGTAAAATATTATATAAAGAGGCTATGGTTAAAG
AGAATCTATCAGAAGATATAAAAGACAAATTTTACAAAGATGGAGATTATCATACTTTCTATTATGCGGAGATATTAGAT
TGTTATATAAAATAG

Upstream 100 bases:

>100_bases
ATCATTTTAAGGTGGCTAGGGAATTAGCAGAAGAAAGTGGGCTTAAACCTGTTTATTATAAAAATAGAAAGCCTGAATTT
ATATAAGGGAGGAAGCTTTT

Downstream 100 bases:

>100_bases
TACTTAAAGGAGTAAAATATTAATTATGTTTGAAAAACCATTAGCAGATAAAATAAGACCAAAAATCTTAGATGAGGTTT
TTGGTCAAAAACACATTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MKFEETLGRAIDLIKEKGAFLTIKDDDKVNTMTIGWANIGYQWRMPIFSVMVRKSRYTYELIEKASEFTVSIPVDVNLKK
ELTFCGSKSGRDVDKIKECNLKLEKGKKIETPIIDNCEMHFECKILYKEAMVKENLSEDIKDKFYKDGDYHTFYYAEILD
CYIK

Sequences:

>Translated_164_residues
MKFEETLGRAIDLIKEKGAFLTIKDDDKVNTMTIGWANIGYQWRMPIFSVMVRKSRYTYELIEKASEFTVSIPVDVNLKK
ELTFCGSKSGRDVDKIKECNLKLEKGKKIETPIIDNCEMHFECKILYKEAMVKENLSEDIKDKFYKDGDYHTFYYAEILD
CYIK
>Mature_164_residues
MKFEETLGRAIDLIKEKGAFLTIKDDDKVNTMTIGWANIGYQWRMPIFSVMVRKSRYTYELIEKASEFTVSIPVDVNLKK
ELTFCGSKSGRDVDKIKECNLKLEKGKKIETPIIDNCEMHFECKILYKEAMVKENLSEDIKDKFYKDGDYHTFYYAEILD
CYIK

Specific function: Unknown

COG id: COG1853

COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flavoredoxin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002563
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01613 Flavin_Reduct [H]

EC number: NA

Molecular weight: Translated: 19260; Mature: 19260

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFEETLGRAIDLIKEKGAFLTIKDDDKVNTMTIGWANIGYQWRMPIFSVMVRKSRYTYE
CCHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEEEECCCEEECCHHHHHHHHCCCCHHH
LIEKASEFTVSIPVDVNLKKELTFCGSKSGRDVDKIKECNLKLEKGKKIETPIIDNCEMH
HHHCCCCEEEEECCCCCCHHHEEECCCCCCCCHHHHHHCCEEECCCCEECCCCCCCCCEE
FECKILYKEAMVKENLSEDIKDKFYKDGDYHTFYYAEILDCYIK
EEEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHCC
>Mature Secondary Structure
MKFEETLGRAIDLIKEKGAFLTIKDDDKVNTMTIGWANIGYQWRMPIFSVMVRKSRYTYE
CCHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEEEECCCEEECCHHHHHHHHCCCCHHH
LIEKASEFTVSIPVDVNLKKELTFCGSKSGRDVDKIKECNLKLEKGKKIETPIIDNCEMH
HHHCCCCEEEEECCCCCCHHHEEECCCCCCCCHHHHHHCCEEECCCCEECCCCCCCCCEE
FECKILYKEAMVKENLSEDIKDKFYKDGDYHTFYYAEILDCYIK
EEEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]