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The map label for this gene is spoVR [H]

Identifier: 28210744

GI number: 28210744

Start: 1111102

End: 1112355

Strand: Direct

Name: spoVR [H]

Synonym: CTC01041

Alternate gene names: 28210744

Gene position: 1111102-1112355 (Clockwise)

Preceding gene: 28210743

Following gene: 28210747

Centisome position: 39.69

GC content: 25.44

Gene sequence:

>1254_bases
TTGGAGGGCTTTAAAAGATATATTAAAGCAAGAGATGAGGGAGGAGAGAGGATGAAGTATAATTTAAAGGATTTGGAGTA
TTGGAGTGATAAAATAGAATATATTGCAAAAGATTTAGGACTCAATTATTATGATCAAGAATTTGAAATAATAAATTATA
ATGAAATGCTTTGTTATGAAGCATATTTAGGAATGCCCTCTAGATATCCTCATTGGAGCTTTGGTAAAAACTATGATAAA
CTAAGAACGCTATATCAGCATAATATAATGGGACTTCCATATGAAATTGTAATAAATTCAAATCCTTGTATAGCATATTT
AATGAAAGATAACCCGCTACCTCTTCAAATACTTACCATGGCACATGTATATGGACATAATGATTTTTTTAAAAACAATA
GAATGTTCAAAGAGAATACAGAAGGAGAGAAGGTTCTAGATAACTTCAAAAACAATTCAAAACTTATAAGAAAATATGCA
GATGATTTTAATATTGGAAGAAAAAAAGTAGAAAGAGTTTTAGATATAGCACATTCTATAAAATTTCAGGAAGAATTAAT
TACGTATATAATGAATAGTAAAAGATTAGAAAAATGGCAGAGAGATATTTTGAGAATCGTAAAGGAAGAAAGTATTTATT
TTATCTCTCAAATAGAAACTAAAATAATAAATGAGGGTTGGGCATCTTTTTGGCATTATGAAATACTAAAGCTTTTAGAC
TTACCACAGGATTATTTTATAGACATTATAAGAATACACAATAGTGTTGTAGCACCAATAGTAGGTAAATTAAACCCTTA
TAATATAGGATTTAATTTATTTAAATCCATAGAAAAGAAATATGGAAGATATAAAATTTTTGAAGCAAGAGAAATAGAAA
GGGATGAATCTTTTATAAGAAAATATTTAGACGAAGAGTTATGTATTGATTTAAACTTATATAAGTATGGCTTTTATGAC
GGAGAAAATATTGTAGAAGGAACTCTTAAAGATATAGGTTTTGAAGGTATGAAAGATACTTTATATCTAAATTGCGGAAT
AAATACAATACCCAATATAATTATAAAAGATGATAATAATAATTTAATATTAAAACAACAATGCGATATAAGAGAATTAA
ATATAGAATATGCAAAAGAGACTCTAAAAAATATAGTGGAAATATTAAACAAAAAGGTAATATTAGAAACTACAGAAAAT
GGTGAAAATATTTTAATAATGTGTAATTTAAATAAAGAAATTGTGTATAAATAA

Upstream 100 bases:

>100_bases
TAATGGGGTATGGATACTCTAATGGCATTAGAAATAAATATCTAAAGGAAATAGAAAAAGAAAATTTTATACCTCTTATC
ATTGAAAAAAAAGAAGATCT

Downstream 100 bases:

>100_bases
ATAAAGCTAAAAGCCTTTAGCTTTTAGCTTATTAATTTATTATCTTATTTGTCCATTTCCATAAATTATATATTTTGTAG
TAGTTAATTGAGTAAGTCCC

Product: stage V sporulation protein R

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MEGFKRYIKARDEGGERMKYNLKDLEYWSDKIEYIAKDLGLNYYDQEFEIINYNEMLCYEAYLGMPSRYPHWSFGKNYDK
LRTLYQHNIMGLPYEIVINSNPCIAYLMKDNPLPLQILTMAHVYGHNDFFKNNRMFKENTEGEKVLDNFKNNSKLIRKYA
DDFNIGRKKVERVLDIAHSIKFQEELITYIMNSKRLEKWQRDILRIVKEESIYFISQIETKIINEGWASFWHYEILKLLD
LPQDYFIDIIRIHNSVVAPIVGKLNPYNIGFNLFKSIEKKYGRYKIFEAREIERDESFIRKYLDEELCIDLNLYKYGFYD
GENIVEGTLKDIGFEGMKDTLYLNCGINTIPNIIIKDDNNNLILKQQCDIRELNIEYAKETLKNIVEILNKKVILETTEN
GENILIMCNLNKEIVYK

Sequences:

>Translated_417_residues
MEGFKRYIKARDEGGERMKYNLKDLEYWSDKIEYIAKDLGLNYYDQEFEIINYNEMLCYEAYLGMPSRYPHWSFGKNYDK
LRTLYQHNIMGLPYEIVINSNPCIAYLMKDNPLPLQILTMAHVYGHNDFFKNNRMFKENTEGEKVLDNFKNNSKLIRKYA
DDFNIGRKKVERVLDIAHSIKFQEELITYIMNSKRLEKWQRDILRIVKEESIYFISQIETKIINEGWASFWHYEILKLLD
LPQDYFIDIIRIHNSVVAPIVGKLNPYNIGFNLFKSIEKKYGRYKIFEAREIERDESFIRKYLDEELCIDLNLYKYGFYD
GENIVEGTLKDIGFEGMKDTLYLNCGINTIPNIIIKDDNNNLILKQQCDIRELNIEYAKETLKNIVEILNKKVILETTEN
GENILIMCNLNKEIVYK
>Mature_417_residues
MEGFKRYIKARDEGGERMKYNLKDLEYWSDKIEYIAKDLGLNYYDQEFEIINYNEMLCYEAYLGMPSRYPHWSFGKNYDK
LRTLYQHNIMGLPYEIVINSNPCIAYLMKDNPLPLQILTMAHVYGHNDFFKNNRMFKENTEGEKVLDNFKNNSKLIRKYA
DDFNIGRKKVERVLDIAHSIKFQEELITYIMNSKRLEKWQRDILRIVKEESIYFISQIETKIINEGWASFWHYEILKLLD
LPQDYFIDIIRIHNSVVAPIVGKLNPYNIGFNLFKSIEKKYGRYKIFEAREIERDESFIRKYLDEELCIDLNLYKYGFYD
GENIVEGTLKDIGFEGMKDTLYLNCGINTIPNIIIKDDNNNLILKQQCDIRELNIEYAKETLKNIVEILNKKVILETTEN
GENILIMCNLNKEIVYK

Specific function: Appears to be involved in spore cortex formation [H]

COG id: COG2719

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ycgB [H]

Homologues:

Organism=Escherichia coli, GI1787437, Length=459, Percent_Identity=30.2832244008715, Blast_Score=176, Evalue=2e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007390 [H]

Pfam domain/function: PF04293 SpoVR [H]

EC number: NA

Molecular weight: Translated: 49767; Mature: 49767

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGFKRYIKARDEGGERMKYNLKDLEYWSDKIEYIAKDLGLNYYDQEFEIINYNEMLCYE
CCHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHH
AYLGMPSRYPHWSFGKNYDKLRTLYQHNIMGLPYEIVINSNPCIAYLMKDNPLPLQILTM
HHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCEEEEEEECCCCCEEHHHH
AHVYGHNDFFKNNRMFKENTEGEKVLDNFKNNSKLIRKYADDFNIGRKKVERVLDIAHSI
HHHHCCCCHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH
KFQEELITYIMNSKRLEKWQRDILRIVKEESIYFISQIETKIINEGWASFWHYEILKLLD
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LPQDYFIDIIRIHNSVVAPIVGKLNPYNIGFNLFKSIEKKYGRYKIFEAREIERDESFIR
CCHHHHHHHHHHHCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEEHHHHHHHHHHHH
KYLDEELCIDLNLYKYGFYDGENIVEGTLKDIGFEGMKDTLYLNCGINTIPNIIIKDDNN
HHCCHHHEEEEEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCEEEEECCC
NLILKQQCDIRELNIEYAKETLKNIVEILNKKVILETTENGENILIMCNLNKEIVYK
CEEEECCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEEEECCHHHCCC
>Mature Secondary Structure
MEGFKRYIKARDEGGERMKYNLKDLEYWSDKIEYIAKDLGLNYYDQEFEIINYNEMLCYE
CCHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHH
AYLGMPSRYPHWSFGKNYDKLRTLYQHNIMGLPYEIVINSNPCIAYLMKDNPLPLQILTM
HHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCEEEEEEECCCCCEEHHHH
AHVYGHNDFFKNNRMFKENTEGEKVLDNFKNNSKLIRKYADDFNIGRKKVERVLDIAHSI
HHHHCCCCHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH
KFQEELITYIMNSKRLEKWQRDILRIVKEESIYFISQIETKIINEGWASFWHYEILKLLD
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LPQDYFIDIIRIHNSVVAPIVGKLNPYNIGFNLFKSIEKKYGRYKIFEAREIERDESFIR
CCHHHHHHHHHHHCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEEHHHHHHHHHHHH
KYLDEELCIDLNLYKYGFYDGENIVEGTLKDIGFEGMKDTLYLNCGINTIPNIIIKDDNN
HHCCHHHEEEEEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCEEEEECCC
NLILKQQCDIRELNIEYAKETLKNIVEILNKKVILETTENGENILIMCNLNKEIVYK
CEEEECCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEEEECCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8144469; 9579061; 9384377 [H]