| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is yeaH [C]
Identifier: 28210743
GI number: 28210743
Start: 1109996
End: 1111156
Strand: Direct
Name: yeaH [C]
Synonym: CTC01040
Alternate gene names: 28210743
Gene position: 1109996-1111156 (Clockwise)
Preceding gene: 28210742
Following gene: 28210744
Centisome position: 39.65
GC content: 29.29
Gene sequence:
>1161_bases ATGGCAATCTTTAGAATCTATACACCAATTTCTTATAATAGAGCAGGGGAGGATAGAAAAAGGCATAGAGAATTAGTGGA GAAATCTATAAAAGATAATTTGGTAGATGTATTACTACAGGAAGATATATCTATACAAAAAGAAAACATAAAAATAAAGG TACCTATAAAGGGGGTTAAGGAATATGAGTTCACATATTCTCAAAATAGATCCTTTGTGGTAGTAGGAAAAGGAAATGAA AAGAAGGGGCAGAAAATAGCATTAAAAAGAGCATCAGAGCAAGGTGGAGGAGCTGGAGCAGGAGAAATAGAAGGTGAGGA TATATTTGAAACTGAAGTAACTATAGAGGAAATATTTCAGAGTATATTTGATGATTTAGAACTTCCTAATTTAAAAAAGA AAAAATTTAATAAGATATTAAATGATAGTTTTAAAAGGAAAAAAGGATTTAAAAAACATGGTATATCTCCAAGGTTAGCT AAAAGAAGAACAGCTATAGAAAAAGTAAAAAGAAAACAGGCTACCCAAAAGGTATTGGGAAGAGATATAGCTGAAAGATT TCCTTTTAAAAAAGATGATTTAAGATATAGTAGAGTTAAACTTAATAAAAATAAAGAATATAATGCAGTAATAATATGCA TAATGGACACTTCCGCTTCAATGGATCAAATGAAAAAATATATGGCAAGGTCTTTTTTCTTTATGATATACAAATTTATA AAAATGAAATATGAAGAGGTAGATATATGCTTTATATCCCACTCAACTACGGCAAAAGAAGTTACAGAAGAGGAATTCTT TCATAAAGTTGAATCTGGAGGAACATATATATCCAGTGGATACAAGAAAGCATTAGAAATAATAAATACAAGGTATAATC CACAGATATATAATATATATACATTTCATGCTAGTGATGGGGATAATTGGAATGAAGATAATGATAGAGCTGTAAAAGTA GCTAAGGAATTAAGCAATGTATGTAATTTGTTTGGGTATATAGAAATAATGGGGTATGGATACTCTAATGGCATTAGAAA TAAATATCTAAAGGAAATAGAAAAAGAAAATTTTATACCTCTTATCATTGAAAAAAAAGAAGATCTTTGGAGGGCTTTAA AAGATATATTAAAGCAAGAGATGAGGGAGGAGAGAGGATGA
Upstream 100 bases:
>100_bases TAAATTTATAGTAGAAAAGTTAAAAAATAATGGATATTGTGATACATGTGCATTTTATACATTAAGATATGCTGCTAACA ACTTTTGGAGGGACTGATTA
Downstream 100 bases:
>100_bases AGTATAATTTAAAGGATTTGGAGTATTGGAGTGATAAAATAGAATATATTGCAAAAGATTTAGGACTCAATTATTATGAT CAAGAATTTGAAATAATAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 386; Mature: 385
Protein sequence:
>386_residues MAIFRIYTPISYNRAGEDRKRHRELVEKSIKDNLVDVLLQEDISIQKENIKIKVPIKGVKEYEFTYSQNRSFVVVGKGNE KKGQKIALKRASEQGGGAGAGEIEGEDIFETEVTIEEIFQSIFDDLELPNLKKKKFNKILNDSFKRKKGFKKHGISPRLA KRRTAIEKVKRKQATQKVLGRDIAERFPFKKDDLRYSRVKLNKNKEYNAVIICIMDTSASMDQMKKYMARSFFFMIYKFI KMKYEEVDICFISHSTTAKEVTEEEFFHKVESGGTYISSGYKKALEIINTRYNPQIYNIYTFHASDGDNWNEDNDRAVKV AKELSNVCNLFGYIEIMGYGYSNGIRNKYLKEIEKENFIPLIIEKKEDLWRALKDILKQEMREERG
Sequences:
>Translated_386_residues MAIFRIYTPISYNRAGEDRKRHRELVEKSIKDNLVDVLLQEDISIQKENIKIKVPIKGVKEYEFTYSQNRSFVVVGKGNE KKGQKIALKRASEQGGGAGAGEIEGEDIFETEVTIEEIFQSIFDDLELPNLKKKKFNKILNDSFKRKKGFKKHGISPRLA KRRTAIEKVKRKQATQKVLGRDIAERFPFKKDDLRYSRVKLNKNKEYNAVIICIMDTSASMDQMKKYMARSFFFMIYKFI KMKYEEVDICFISHSTTAKEVTEEEFFHKVESGGTYISSGYKKALEIINTRYNPQIYNIYTFHASDGDNWNEDNDRAVKV AKELSNVCNLFGYIEIMGYGYSNGIRNKYLKEIEKENFIPLIIEKKEDLWRALKDILKQEMREERG >Mature_385_residues AIFRIYTPISYNRAGEDRKRHRELVEKSIKDNLVDVLLQEDISIQKENIKIKVPIKGVKEYEFTYSQNRSFVVVGKGNEK KGQKIALKRASEQGGGAGAGEIEGEDIFETEVTIEEIFQSIFDDLELPNLKKKKFNKILNDSFKRKKGFKKHGISPRLAK RRTAIEKVKRKQATQKVLGRDIAERFPFKKDDLRYSRVKLNKNKEYNAVIICIMDTSASMDQMKKYMARSFFFMIYKFIK MKYEEVDICFISHSTTAKEVTEEEFFHKVESGGTYISSGYKKALEIINTRYNPQIYNIYTFHASDGDNWNEDNDRAVKVA KELSNVCNLFGYIEIMGYGYSNGIRNKYLKEIEKENFIPLIIEKKEDLWRALKDILKQEMREERG
Specific function: Unknown
COG id: COG2718
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0229 family [H]
Homologues:
Organism=Escherichia coli, GI1788084, Length=319, Percent_Identity=31.0344827586207, Blast_Score=157, Evalue=1e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014230 - InterPro: IPR006698 - InterPro: IPR002035 [H]
Pfam domain/function: PF04285 DUF444 [H]
EC number: NA
Molecular weight: Translated: 45140; Mature: 45008
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIFRIYTPISYNRAGEDRKRHRELVEKSIKDNLVDVLLQEDISIQKENIKIKVPIKGVK CEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCEEEEEECCCCC EYEFTYSQNRSFVVVGKGNEKKGQKIALKRASEQGGGAGAGEIEGEDIFETEVTIEEIFQ CEEEEECCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH SIFDDLELPNLKKKKFNKILNDSFKRKKGFKKHGISPRLAKRRTAIEKVKRKQATQKVLG HHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH RDIAERFPFKKDDLRYSRVKLNKNKEYNAVIICIMDTSASMDQMKKYMARSFFFMIYKFI HHHHHHCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH KMKYEEVDICFISHSTTAKEVTEEEFFHKVESGGTYISSGYKKALEIINTRYNPQIYNIY HHHHCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEEE TFHASDGDNWNEDNDRAVKVAKELSNVCNLFGYIEIMGYGYSNGIRNKYLKEIEKENFIP EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHCCCCE LIIEKKEDLWRALKDILKQEMREERG EEEECHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AIFRIYTPISYNRAGEDRKRHRELVEKSIKDNLVDVLLQEDISIQKENIKIKVPIKGVK EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCEEEEEECCCCC EYEFTYSQNRSFVVVGKGNEKKGQKIALKRASEQGGGAGAGEIEGEDIFETEVTIEEIFQ CEEEEECCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH SIFDDLELPNLKKKKFNKILNDSFKRKKGFKKHGISPRLAKRRTAIEKVKRKQATQKVLG HHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH RDIAERFPFKKDDLRYSRVKLNKNKEYNAVIICIMDTSASMDQMKKYMARSFFFMIYKFI HHHHHHCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH KMKYEEVDICFISHSTTAKEVTEEEFFHKVESGGTYISSGYKKALEIINTRYNPQIYNIY HHHHCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEEE TFHASDGDNWNEDNDRAVKVAKELSNVCNLFGYIEIMGYGYSNGIRNKYLKEIEKENFIP EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHCCCCE LIIEKKEDLWRALKDILKQEMREERG EEEECHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA