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The map label for this gene is atpF [H]

Identifier: 28210704

GI number: 28210704

Start: 1068907

End: 1069224

Strand: Direct

Name: atpF [H]

Synonym: CTC00998

Alternate gene names: 28210704

Gene position: 1068907-1069224 (Clockwise)

Preceding gene: 28210703

Following gene: 28210705

Centisome position: 38.19

GC content: 31.45

Gene sequence:

>318_bases
GTGATGCCTATGTTTAAGATAGGGGTAGTTGGAGACAAAGATTCAATCTTAGCGTTTAAATCAATAGGTATAGATGTGTT
TCCAGTTGTAAATTCAAAGGAAGCAAGAAAAGCAGTAGATAAAATGGCAGCAACAAAATATGGTGTTATCTTCATAACAG
AACAAATAGCTAAAGATTTAGATGAGACTATTGAAAGATACAATAGAGAGATTGTGCCAGCTATTATACTTATTCCAAGT
AATCAAGGTTCACTTAATATAGGTCTAAAAAGAATTAGTGATAATGTAGAAAAGGCAGTTGGAGTTAATATTTTATAG

Upstream 100 bases:

>100_bases
GGATATATAATTGCAAAAGAAACGGAAATAAAAATAATAAGAATAATAATGGTTGGTAAATTAAATAGTATAGCACCAAA
TATTATAAGAGAAAGGCTGC

Downstream 100 bases:

>100_bases
GAAGGTAGGTAGGTGGACTTGAAGACTGGTAGAGTTGTAAAAGTGTCAGGACCTTTAGTAGTTGCTGAAGGTATGGAAGA
AGCTAATCTATTTGACGTTG

Product: V-type ATP synthase subunit F

Products: ADP; phosphate; H+

Alternate protein names: V-ATPase subunit F [H]

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MMPMFKIGVVGDKDSILAFKSIGIDVFPVVNSKEARKAVDKMAATKYGVIFITEQIAKDLDETIERYNREIVPAIILIPS
NQGSLNIGLKRISDNVEKAVGVNIL

Sequences:

>Translated_105_residues
MMPMFKIGVVGDKDSILAFKSIGIDVFPVVNSKEARKAVDKMAATKYGVIFITEQIAKDLDETIERYNREIVPAIILIPS
NQGSLNIGLKRISDNVEKAVGVNIL
>Mature_105_residues
MMPMFKIGVVGDKDSILAFKSIGIDVFPVVNSKEARKAVDKMAATKYGVIFITEQIAKDLDETIERYNREIVPAIILIPS
NQGSLNIGLKRISDNVEKAVGVNIL

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane [H]

COG id: COG1436

COG function: function code C; Archaeal/vacuolar-type H+-ATPase subunit F

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the V-ATPase F subunit family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022944
- InterPro:   IPR008218 [H]

Pfam domain/function: PF01990 ATP-synt_F [H]

EC number: 3.6.3.14

Molecular weight: Translated: 11535; Mature: 11535

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMPMFKIGVVGDKDSILAFKSIGIDVFPVVNSKEARKAVDKMAATKYGVIFITEQIAKDL
CCCCEEEEEECCCCCEEEHHHCCEEEEECCCCHHHHHHHHHHHHHHCCEEEEEHHHHHHH
DETIERYNREIVPAIILIPSNQGSLNIGLKRISDNVEKAVGVNIL
HHHHHHHCCCCCEEEEEEECCCCCEEEHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MMPMFKIGVVGDKDSILAFKSIGIDVFPVVNSKEARKAVDKMAATKYGVIFITEQIAKDL
CCCCEEEEEECCCCCEEEHHHCCEEEEECCCCHHHHHHHHHHHHHHCCEEEEEHHHHHHH
DETIERYNREIVPAIILIPSNQGSLNIGLKRISDNVEKAVGVNIL
HHHHHHHCCCCCEEEEEEECCCCCEEEHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11792842 [H]