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The map label for this gene is atpC [H]

Identifier: 28210703

GI number: 28210703

Start: 1067922

End: 1068923

Strand: Direct

Name: atpC [H]

Synonym: CTC00997

Alternate gene names: 28210703

Gene position: 1067922-1068923 (Clockwise)

Preceding gene: 28210702

Following gene: 28210704

Centisome position: 38.15

GC content: 26.75

Gene sequence:

>1002_bases
ATGGATAATTTGCAATTCACCCATGCTATTGCAAGAATTAGAGTACTTGAAACTAGACTTCTTGATAGATCCAAGATTGA
AAGAATGATAGATAGTTCCTCCGCTGAAGAAGCTTTAAAGATACTTGGAGAAACTGAGTATTTAAATTATATGTCAAATG
TAAGAAGCCCTGAAGATTATGAAATACTTTTAAGTGAGGAACTTAAAAGATTATATACTCTTTTATATAGTATTAGCCCT
GAAAGATCTATTATAGATATAATGGCTTTAAGATATGATTACCATAATTTAAAAGTAATGCTAAAGGGCAAATACTTAGA
AAAAGATTTAACATATCTTTTAATACCAGTAGGAACTATAAGTAACGATAAATTAAAACAAATATTTGCTACGGAATTTT
ATAAAGAACTTACTCCTTTGATGAGAGAAGCTTTAGAAAAAGCAGAAAGTGAATATGAAGGGGATAAAGATCCTCAAAAA
ATAGATTTAATTCTAGATAGCTATGCGTATAAAGAAATATTATCAAAATCAGAAGAAGTAAATGAAAAATTTATAAATGA
CTATATTAAAATGTCTATAGACCTAAACAATATAAGAGCATTATTAAGAGCAAAAGCTCAAAATAAACATAGAAAGTTTT
TTGAAGCTATTATTTTAGATGGGGGAACTATTGATAAGAAAACACTAATAAGCTATGAAAGTGAAACATCAGATAGTATA
GCTAATAAACTTTCATATACTCCATATGAAAAAATAATAAGACTAGGATTAGAAGAGTATAGTAAAACTAATAACATAAG
TTATTTTGAAAAACTTTCCGAGAATTATATAATGGACTTTATAAAAAAAGCAAAGCAAGTAAGCTTTGGAGTTGAACCTT
TAATTGGATATATAATTGCAAAAGAAACGGAAATAAAAATAATAAGAATAATAATGGTTGGTAAATTAAATAGTATAGCA
CCAAATATTATAAGAGAAAGGCTGCGTGATGCCTATGTTTAA

Upstream 100 bases:

>100_bases
ATAGAAATAAATAATACTTTTGAAGCACTAATACTTTCTCTTAAAGATGATTTAGAACCTGTTATTATAGACACCTTGTT
CAGTTAGGAGGGGAGTTACA

Downstream 100 bases:

>100_bases
GATAGGGGTAGTTGGAGACAAAGATTCAATCTTAGCGTTTAAATCAATAGGTATAGATGTGTTTCCAGTTGTAAATTCAA
AGGAAGCAAGAAAAGCAGTA

Product: V-type ATP synthase subunit C

Products: ADP; phosphate; H+

Alternate protein names: V-ATPase subunit C [H]

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MDNLQFTHAIARIRVLETRLLDRSKIERMIDSSSAEEALKILGETEYLNYMSNVRSPEDYEILLSEELKRLYTLLYSISP
ERSIIDIMALRYDYHNLKVMLKGKYLEKDLTYLLIPVGTISNDKLKQIFATEFYKELTPLMREALEKAESEYEGDKDPQK
IDLILDSYAYKEILSKSEEVNEKFINDYIKMSIDLNNIRALLRAKAQNKHRKFFEAIILDGGTIDKKTLISYESETSDSI
ANKLSYTPYEKIIRLGLEEYSKTNNISYFEKLSENYIMDFIKKAKQVSFGVEPLIGYIIAKETEIKIIRIIMVGKLNSIA
PNIIRERLRDAYV

Sequences:

>Translated_333_residues
MDNLQFTHAIARIRVLETRLLDRSKIERMIDSSSAEEALKILGETEYLNYMSNVRSPEDYEILLSEELKRLYTLLYSISP
ERSIIDIMALRYDYHNLKVMLKGKYLEKDLTYLLIPVGTISNDKLKQIFATEFYKELTPLMREALEKAESEYEGDKDPQK
IDLILDSYAYKEILSKSEEVNEKFINDYIKMSIDLNNIRALLRAKAQNKHRKFFEAIILDGGTIDKKTLISYESETSDSI
ANKLSYTPYEKIIRLGLEEYSKTNNISYFEKLSENYIMDFIKKAKQVSFGVEPLIGYIIAKETEIKIIRIIMVGKLNSIA
PNIIRERLRDAYV
>Mature_333_residues
MDNLQFTHAIARIRVLETRLLDRSKIERMIDSSSAEEALKILGETEYLNYMSNVRSPEDYEILLSEELKRLYTLLYSISP
ERSIIDIMALRYDYHNLKVMLKGKYLEKDLTYLLIPVGTISNDKLKQIFATEFYKELTPLMREALEKAESEYEGDKDPQK
IDLILDSYAYKEILSKSEEVNEKFINDYIKMSIDLNNIRALLRAKAQNKHRKFFEAIILDGGTIDKKTLISYESETSDSI
ANKLSYTPYEKIIRLGLEEYSKTNNISYFEKLSENYIMDFIKKAKQVSFGVEPLIGYIIAKETEIKIIRIIMVGKLNSIA
PNIIRERLRDAYV

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane [H]

COG id: COG1527

COG function: function code C; Archaeal/vacuolar-type H+-ATPase subunit C

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the V-ATPase V0D/AC39 subunit family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014272
- InterPro:   IPR002843 [H]

Pfam domain/function: PF01992 vATP-synt_AC39 [H]

EC number: 3.6.3.14

Molecular weight: Translated: 38861; Mature: 38861

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNLQFTHAIARIRVLETRLLDRSKIERMIDSSSAEEALKILGETEYLNYMSNVRSPEDY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHCCCCCHH
EILLSEELKRLYTLLYSISPERSIIDIMALRYDYHNLKVMLKGKYLEKDLTYLLIPVGTI
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEECCHHHCCCEEEEEECCCC
SNDKLKQIFATEFYKELTPLMREALEKAESEYEGDKDPQKIDLILDSYAYKEILSKSEEV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
NEKFINDYIKMSIDLNNIRALLRAKAQNKHRKFFEAIILDGGTIDKKTLISYESETSDSI
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEECCCCHHHH
ANKLSYTPYEKIIRLGLEEYSKTNNISYFEKLSENYIMDFIKKAKQVSFGVEPLIGYIIA
HHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHC
KETEIKIIRIIMVGKLNSIAPNIIRERLRDAYV
CCCCEEEEEEEEECCCHHCCHHHHHHHHHHCCC
>Mature Secondary Structure
MDNLQFTHAIARIRVLETRLLDRSKIERMIDSSSAEEALKILGETEYLNYMSNVRSPEDY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHCCCCCHH
EILLSEELKRLYTLLYSISPERSIIDIMALRYDYHNLKVMLKGKYLEKDLTYLLIPVGTI
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEECCHHHCCCEEEEEECCCC
SNDKLKQIFATEFYKELTPLMREALEKAESEYEGDKDPQKIDLILDSYAYKEILSKSEEV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
NEKFINDYIKMSIDLNNIRALLRAKAQNKHRKFFEAIILDGGTIDKKTLISYESETSDSI
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEECCCCHHHH
ANKLSYTPYEKIIRLGLEEYSKTNNISYFEKLSENYIMDFIKKAKQVSFGVEPLIGYIIA
HHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHC
KETEIKIIRIIMVGKLNSIAPNIIRERLRDAYV
CCCCEEEEEEEEECCCHHCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]